RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MAST2Q6P0Q8 1798 aa22.8■■□□□ 1.24
PRKCB-209ENST00000498058 ZBTB7BO15156 539 aaPredicted RBP22.79■■□□□ 1.24
PRKCB-209ENST00000498058 CYP2E1P05181 493 aaPredicted RBP22.79■■□□□ 1.24
PRKCB-209ENST00000498058 GRK4P32298 578 aa22.79■■□□□ 1.24
PRKCB-209ENST00000498058 TEX11Q8IYF3 940 aa22.79■■□□□ 1.24
PRKCB-209ENST00000498058 RAET1EQ8TD07 263 aa22.79■■□□□ 1.24
PRKCB-209ENST00000498058 TLR7Q9NYK1 1049 aaKnown RBP22.79■■□□□ 1.24
PRKCB-209ENST00000498058 SLC45A1Q9Y2W3 748 aa22.79■■□□□ 1.24
PRKCB-209ENST00000498058 SURF6O75683 361 aaKnown RBP22.78■■□□□ 1.24
PRKCB-209ENST00000498058 MAP4K4O95819 1239 aaPredicted RBP22.78■■□□□ 1.24
PRKCB-209ENST00000498058 HOXD10P28358 340 aa22.78■■□□□ 1.24
PRKCB-209ENST00000498058 TTC39AQ5SRH9 613 aa22.78■■□□□ 1.24
PRKCB-209ENST00000498058 AATFQ9NY61 560 aaKnown RBP eCLIP22.78■■□□□ 1.24
PRKCB-209ENST00000498058 LOC285556D6RIA3 1793 aa22.78■■□□□ 1.24
PRKCB-209ENST00000498058 ZBED9Q6R2W3 1325 aa22.78■■□□□ 1.24
PRKCB-209ENST00000498058 FOCADQ5VW36 1801 aa22.78■■□□□ 1.24
PRKCB-209ENST00000498058 ZAP70P43403 619 aa22.77■■□□□ 1.24
PRKCB-209ENST00000498058 FCGRTP55899 365 aa22.77■■□□□ 1.24
PRKCB-209ENST00000498058 JAG1P78504 1218 aa22.77■■□□□ 1.24
PRKCB-209ENST00000498058 SPP2Q13103 211 aa22.77■■□□□ 1.24
PRKCB-209ENST00000498058 PIH1D3Q9NQM4 214 aaKnown RBP22.77■■□□□ 1.24
PRKCB-209ENST00000498058 DBNLQ9UJU6 430 aaKnown RBP22.77■■□□□ 1.24
PRKCB-209ENST00000498058 AGTPBP1Q9UPW5 1226 aa22.77■■□□□ 1.24
PRKCB-209ENST00000498058 NOP58Q9Y2X3 529 aaKnown RBP22.77■■□□□ 1.24
PRKCB-209ENST00000498058 CAP2P40123 477 aa22.76■■□□□ 1.23
PRKCB-209ENST00000498058 OS9Q13438 667 aaPredicted RBP22.76■■□□□ 1.23
PRKCB-209ENST00000498058 HABP4Q5JVS0 413 aaKnown RBP22.76■■□□□ 1.23
PRKCB-209ENST00000498058 NAA16Q6N069 864 aaPredicted RBP22.76■■□□□ 1.23
PRKCB-209ENST00000498058 DNAJC18Q9H819 358 aa22.76■■□□□ 1.23
PRKCB-209ENST00000498058 CCL5P13501 91 aa22.75■■□□□ 1.23
PRKCB-209ENST00000498058 PPP4CP60510 307 aa22.75■■□□□ 1.23
PRKCB-209ENST00000498058 SHROOM1Q2M3G4 852 aaPredicted RBP22.75■■□□□ 1.23
PRKCB-209ENST00000498058 CCDC158Q5M9N0 1113 aa22.75■■□□□ 1.23
PRKCB-209ENST00000498058 ITPRIPQ8IWB1 547 aa22.75■■□□□ 1.23
PRKCB-209ENST00000498058 EAF2Q96CJ1 260 aaPredicted RBP22.75■■□□□ 1.23
PRKCB-209ENST00000498058 CCDC8Q9H0W5 538 aaPredicted RBP22.75■■□□□ 1.23
PRKCB-209ENST00000498058 FLT3LGP49771 235 aa22.74■■□□□ 1.23
PRKCB-209ENST00000498058 MAPKAPK5Q8IW41 473 aa22.74■■□□□ 1.23
PRKCB-209ENST00000498058 ANKRD13CQ8N6S4 541 aa22.74■■□□□ 1.23
PRKCB-209ENST00000498058 ZNF280CQ8ND82 737 aa22.74■■□□□ 1.23
PRKCB-209ENST00000498058 TGFBRAP1Q8WUH2 860 aa22.74■■□□□ 1.23
PRKCB-209ENST00000498058 GCC1Q96CN9 775 aa22.74■■□□□ 1.23
PRKCB-209ENST00000498058 ZNF512BQ96KM6 892 aaPredicted RBP22.74■■□□□ 1.23
PRKCB-209ENST00000498058 HMGCS2P54868 508 aa22.73■■□□□ 1.23
PRKCB-209ENST00000498058 DYNLL1P63167 89 aaKnown RBP22.73■■□□□ 1.23
PRKCB-209ENST00000498058 FTSJ3Q8IY81 847 aaKnown RBP22.73■■□□□ 1.23
PRKCB-209ENST00000498058 NDUFB9Q9Y6M9 179 aa22.73■■□□□ 1.23
PRKCB-209ENST00000498058 ELNP15502 786 aa22.72■■□□□ 1.23
PRKCB-209ENST00000498058 GJA8P48165 433 aa22.72■■□□□ 1.23
PRKCB-209ENST00000498058 UBE2Q1Q7Z7E8 422 aa22.72■■□□□ 1.23
PRKCB-209ENST00000498058 PROCA1Q8NCQ7 364 aaPredicted RBP22.72■■□□□ 1.23
PRKCB-209ENST00000498058 SMCR8Q8TEV9 937 aaPredicted RBP22.72■■□□□ 1.23
PRKCB-209ENST00000498058 UNC93B1Q9H1C4 597 aa22.72■■□□□ 1.23
PRKCB-209ENST00000498058 PI4KBQ9UBF8 816 aa22.72■■□□□ 1.23
PRKCB-209ENST00000498058 HERC5Q9UII4 1024 aaKnown RBP22.72■■□□□ 1.23
PRKCB-209ENST00000498058 FLT1P17948 1338 aa22.72■■□□□ 1.23
PRKCB-209ENST00000498058 USP17L5A8MUK1 530 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 ADCY3O60266 1144 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 GJB1P08034 283 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 SH3D19Q5HYK7 790 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 CEP85Q6P2H3 762 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 METTL16Q86W50 562 aaKnown RBP22.71■■□□□ 1.23
PRKCB-209ENST00000498058 SLAIN1Q8ND83 568 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 RNF208Q9H0X6 261 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 PCDH10Q9P2E7 1040 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 BIN2Q9UBW5 565 aaPredicted RBP22.71■■□□□ 1.23
PRKCB-209ENST00000498058 PALD1Q9ULE6 856 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 CEP290O15078 2479 aa22.71■■□□□ 1.23
PRKCB-209ENST00000498058 TNPO2O14787 897 aaKnown RBP22.7■■□□□ 1.22
PRKCB-209ENST00000498058 BAG3O95817 575 aa22.7■■□□□ 1.22
PRKCB-209ENST00000498058 PANK1Q8TE04 598 aa22.7■■□□□ 1.22
PRKCB-209ENST00000498058 NOL10Q9BSC4 688 aaKnown RBP22.7■■□□□ 1.22
PRKCB-209ENST00000498058 DHX36Q9H2U1 1008 aaKnown RBP22.7■■□□□ 1.22
PRKCB-209ENST00000498058 H0YGN5 161 aa22.69■■□□□ 1.22
PRKCB-209ENST00000498058 ASCC2Q9H1I8 757 aaPredicted RBP22.69■■□□□ 1.22
PRKCB-209ENST00000498058 ANTXR1Q9H6X2 564 aa22.69■■□□□ 1.22
PRKCB-209ENST00000498058 SAP30BPQ9UHR5 308 aaKnown RBP22.69■■□□□ 1.22
PRKCB-209ENST00000498058 COLQQ9Y215 455 aaPredicted RBP22.69■■□□□ 1.22
PRKCB-209ENST00000498058 MYH1P12882 1939 aa22.69■■□□□ 1.22
PRKCB-209ENST00000498058 PEX10O60683 326 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 GDF11O95390 407 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 INHAP05111 366 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 PLCG2P16885 1265 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 UBXN2AP68543 259 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 IRF5Q13568 498 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 FAM110CQ1W6H9 321 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 WDR18Q9BV38 432 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 EXOC6BQ9Y2D4 811 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 PLXNB2O15031 1838 aa22.68■■□□□ 1.22
PRKCB-209ENST00000498058 CYP7A1P22680 504 aa22.67■■□□□ 1.22
PRKCB-209ENST00000498058 MTMR2Q13614 643 aa22.67■■□□□ 1.22
PRKCB-209ENST00000498058 U2AF1L4Q8WU68 220 aaKnown RBP22.67■■□□□ 1.22
PRKCB-209ENST00000498058 TBC1D2Q9BYX2 928 aa22.67■■□□□ 1.22
PRKCB-209ENST00000498058 PNMA3Q9UL41 463 aa22.67■■□□□ 1.22
PRKCB-209ENST00000498058 FOXP4Q8IVH2 680 aaPredicted RBP22.66■■□□□ 1.22
PRKCB-209ENST00000498058 MIGA1Q8NAN2 632 aa22.66■■□□□ 1.22
PRKCB-209ENST00000498058 NKX2-3Q8TAU0 364 aa22.66■■□□□ 1.22
PRKCB-209ENST00000498058 PXYLP1Q8TE99 480 aa22.66■■□□□ 1.22
PRKCB-209ENST00000498058 IDH1O75874 414 aaKnown RBP22.65■■□□□ 1.22
PRKCB-209ENST00000498058 FXR1P51114 621 aaKnown RBP eCLIP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms