RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 RHPN1Q8TCX5 695 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 NEUROD4Q9HD90 331 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 ANKIB1Q9P2G1 1089 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 INPP5FQ9Y2H2 1132 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 CHD4Q14839 1912 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 C4AP0C0L4 1744 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 TJP1Q07157 1748 aa7.69□□□□□ -1.18
TMEM39A-212ENST00000497993 APBA3O96018 575 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 MAPK8P45983 427 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 ZNF746Q6NUN9 644 aaPredicted RBP7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 NLGN1Q8N2Q7 840 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 RAPGEF4Q8WZA2 1011 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 MYO19Q96H55 970 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 FAM161BQ96MY7 647 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 SUGT1Q9Y2Z0 365 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 GJA3Q9Y6H8 435 aa7.68□□□□□ -1.18
TMEM39A-212ENST00000497993 CYP27B1O15528 508 aa7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 STK10O94804 968 aaKnown RBP7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 THBS1P07996 1170 aa7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 IL13P35225 146 aa7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 NFE2L2Q16236 605 aa7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 PTF1AQ7RTS3 328 aa7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 ZNF526Q8TF50 670 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 TRERF1Q96PN7 1200 aa7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 KDM6AO15550 1401 aaPredicted RBP7.67□□□□□ -1.18
TMEM39A-212ENST00000497993 TPD52L2O43399 206 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 KCNQ2O43526 872 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 HMGB2P26583 209 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 TNNI2P48788 182 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 UBAP2LQ14157 1087 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 TCEAL1Q15170 157 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 LCE2AQ5TA79 106 aaPredicted RBP7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 MORC1Q86VD1 984 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 GTPBP3Q969Y2 492 aaKnown RBP7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 CFHR5Q9BXR6 569 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 KLHL42Q9P2K6 505 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 PCDHGC4Q9Y5F7 938 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 ERBB4Q15303 1308 aa7.66□□□□□ -1.18
TMEM39A-212ENST00000497993 BRCA1P38398 1863 aaKnown RBP7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 EHHADHQ08426 723 aa7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 DSC3Q14574 896 aa7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 TXNRD1Q16881 649 aa7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 ZNF654Q8IZM8 581 aa7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 LTV1Q96GA3 475 aaPredicted RBP7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 ZCCHC2Q9C0B9 1178 aaKnown RBP7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 MAGEC2Q9UBF1 373 aaPredicted RBP7.65□□□□□ -1.18
TMEM39A-212ENST00000497993 LAMB4A4D0S4 1761 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 KDM3BQ7LBC6 1761 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 MAP3K5Q99683 1374 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 ATXN7O15265 892 aaPredicted RBP7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 PHKG2P15735 406 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 BMS1Q14692 1282 aaKnown RBP7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 C11orf91Q3C1V1 193 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 C16orf46Q6P387 395 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 LRRC69Q6ZNQ3 347 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 TICAM2Q86XR7 235 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 USHBP1Q8N6Y0 703 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 MRFAP1L1Q96HT8 127 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 SUSD3Q96L08 255 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 NDFIP2Q9NV92 336 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 ATXN7L1Q9ULK2 861 aaPredicted RBP7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 SPG7Q9UQ90 795 aa7.64□□□□□ -1.19
TMEM39A-212ENST00000497993 FAM157BP0CG42 384 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 MTHFSP49914 203 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 COX20Q5RI15 118 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 IER5Q5VY09 327 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 ALKBH2Q6NS38 261 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 IFNL2Q8IZJ0 200 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 LRRC4BQ9NT99 713 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 KIAA1551Q9HCM1 1747 aa7.63□□□□□ -1.19
TMEM39A-212ENST00000497993 KCPQ6ZWJ8 1503 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 PALLDQ8WX93 1383 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 BCORQ6W2J9 1755 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 NRXN2Q9P2S2 1712 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 ERVV-2B6SEH9 535 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 TGFBR3LH3BV60 316 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 BNIP3LO60238 219 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 HSP90AB1P08238 724 aaKnown RBP7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 DGKZQ13574 1117 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 LAMC2Q13753 1193 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 NAA30Q147X3 362 aaPredicted RBP7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 SLC15A2Q16348 729 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 LCE2CQ5TA81 110 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 ALG1LQ6GMV1 187 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 JAZF1Q86VZ6 243 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 DCAF5Q96JK2 942 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 LRFN2Q9ULH4 789 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 COL4A3BPQ9Y5P4 624 aa7.62□□□□□ -1.19
TMEM39A-212ENST00000497993 CEMIPQ8WUJ3 1361 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 SCN7AQ01118 1682 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 GPR25O00155 361 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 XRCC5P13010 732 aaKnown RBP7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 MPSTP25325 297 aa7.61□□□□□ -1.19
TMEM39A-212ENST00000497993 GMPRP36959 345 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms