RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GAL3ST3Q96A11 431 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 HEXIM2Q96MH2 286 aaKnown RBP5.88□□□□□ -1.47
PSPC1-205ENST00000497722 CBX8Q9HC52 389 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 PLAGL2Q9UPG8 496 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 SAMM50Q9Y512 469 aa5.88□□□□□ -1.47
PSPC1-205ENST00000497722 ZBTB7CA1YPR0 619 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 BIN1O00499 593 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 FANCGO15287 622 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 PRPF40AO75400 957 aaKnown RBP5.87□□□□□ -1.47
PSPC1-205ENST00000497722 PAPLNO95428 1278 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 LRRC14Q15048 493 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 SND1Q7KZF4 910 aaKnown RBP eCLIP5.87□□□□□ -1.47
PSPC1-205ENST00000497722 C12orf40Q86WS4 652 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.87□□□□□ -1.47
PSPC1-205ENST00000497722 FAM181AQ8N9Y4 354 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 NETO1Q8TDF5 533 aa5.87□□□□□ -1.47
PSPC1-205ENST00000497722 NCANO14594 1321 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 DCDC2CA8MYV0 355 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 INPP5AQ14642 412 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 DNAJC14Q6Y2X3 702 aaPredicted RBP5.86□□□□□ -1.47
PSPC1-205ENST00000497722 ZNF574Q6ZN55 896 aaPredicted RBP5.86□□□□□ -1.47
PSPC1-205ENST00000497722 CYFIP1Q7L576 1253 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 STK11IPQ8N1F8 1099 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 FLCNQ8NFG4 579 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 MISP3Q96FF7 219 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 ACSBG1Q96GR2 724 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 TNKS2Q9H2K2 1166 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 SLC5A6Q9Y289 635 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 CSADQ9Y600 493 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 AK5Q9Y6K8 562 aa5.86□□□□□ -1.47
PSPC1-205ENST00000497722 ANKRD33BA6NCL7 494 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 BNIP3Q12983 259 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 LRFN4Q6PJG9 635 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 KSR1Q8IVT5 923 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 TOP6BLQ8N6T0 577 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 VAV3Q9UKW4 847 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 PCDHA4Q9UN74 947 aa5.85□□□□□ -1.47
PSPC1-205ENST00000497722 IGF2BP3O00425 579 aaKnown RBP eCLIP5.84□□□□□ -1.47
PSPC1-205ENST00000497722 EOMESO95936 686 aa5.84□□□□□ -1.47
PSPC1-205ENST00000497722 CEACAM5P06731 702 aa5.84□□□□□ -1.47
PSPC1-205ENST00000497722 EIF4BP23588 611 aaKnown RBP5.84□□□□□ -1.47
PSPC1-205ENST00000497722 PRKCQQ04759 706 aa5.84□□□□□ -1.47
PSPC1-205ENST00000497722 IFI16Q16666 785 aaKnown RBP5.84□□□□□ -1.47
PSPC1-205ENST00000497722 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.84□□□□□ -1.47
PSPC1-205ENST00000497722 NPAS4Q8IUM7 802 aa5.84□□□□□ -1.47
PSPC1-205ENST00000497722 DUSP9Q99956 384 aaKnown RBP5.84□□□□□ -1.47
PSPC1-205ENST00000497722 PRDM10Q9NQV6 1147 aa5.84□□□□□ -1.47
PSPC1-205ENST00000497722 PRRG2O14669 202 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 ZNF865P0CJ78 1059 aaPredicted RBP5.83□□□□□ -1.48
PSPC1-205ENST00000497722 CD8BP10966 210 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 FUT4P22083 530 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 CAP2P40123 477 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 CDK8P49336 464 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 RPS26P62854 115 aaKnown RBP5.83□□□□□ -1.48
PSPC1-205ENST00000497722 SLBPQ14493 270 aaKnown RBP eCLIP5.83□□□□□ -1.48
PSPC1-205ENST00000497722 TTBK2Q6IQ55 1244 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 PLPPR2Q96GM1 343 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 SLC38A3Q99624 504 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 FBRSQ9HAH7 460 aa5.83□□□□□ -1.48
PSPC1-205ENST00000497722 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
PSPC1-205ENST00000497722 GFRA2O00451 464 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 ZNF792Q3KQV3 632 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 LILRA6Q6PI73 481 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 AGMOQ6ZNB7 445 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 SPACA3Q8IXA5 215 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 SSU72Q9NP77 194 aaKnown RBP5.82□□□□□ -1.48
PSPC1-205ENST00000497722 ADAMTS6Q9UKP5 1117 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 TTF2Q9UNY4 1162 aaKnown RBP5.82□□□□□ -1.48
PSPC1-205ENST00000497722 SNX11Q9Y5W9 270 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 SNCAIPQ9Y6H5 919 aa5.82□□□□□ -1.48
PSPC1-205ENST00000497722 CNTNAP4Q9C0A0 1308 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 TMEM265A0A087WTH1 108 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 SLITRK5O94991 958 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 CD96P40200 585 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 DAB2P98082 770 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 NKPD1Q17RQ9 610 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 EAPPQ56P03 285 aaPredicted RBP5.81□□□□□ -1.48
PSPC1-205ENST00000497722 ARMCX6Q7L4S7 300 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 FBXO33Q7Z6M2 555 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 KCT2Q8NC54 265 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 ZNF507Q8TCN5 953 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 WNT10AQ9GZT5 417 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 MBNL3Q9NUK0 354 aaKnown RBP5.81□□□□□ -1.48
PSPC1-205ENST00000497722 PCDHB5Q9Y5E4 795 aa5.81□□□□□ -1.48
PSPC1-205ENST00000497722 B8ZZF3 427 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 LRIG2O94898 1065 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 RNASE1P07998 156 aaKnown RBP5.8□□□□□ -1.48
PSPC1-205ENST00000497722 CTSHP09668 335 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 FGD1P98174 961 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 NKG7Q16617 165 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 AOC3Q16853 763 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 MEI1Q5TIA1 1274 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 HDXQ7Z353 690 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 ELMO3Q96BJ8 720 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 PARP2Q9UGN5 583 aa5.8□□□□□ -1.48
PSPC1-205ENST00000497722 LIG3P49916 1009 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 PLCL1Q15111 1095 aa5.79□□□□□ -1.48
PSPC1-205ENST00000497722 CCDC85BQ15834 202 aaPredicted RBP5.79□□□□□ -1.48
PSPC1-205ENST00000497722 WIPI1Q5MNZ9 446 aaPredicted RBP5.79□□□□□ -1.48
PSPC1-205ENST00000497722 C22orf34Q6ZV56 151 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms