RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 AOC3Q16853 763 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 OGFOD2Q6N063 350 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 ARHGAP27Q6ZUM4 889 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 SV2BQ7L1I2 683 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 HRASLS5Q96KN8 279 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 MBNL3Q9NUK0 354 aaKnown RBP6.68□□□□□ -1.34
CBX3-208ENST00000497498 SNX11Q9Y5W9 270 aa6.68□□□□□ -1.34
CBX3-208ENST00000497498 LDHBP07195 334 aaKnown RBP6.67□□□□□ -1.34
CBX3-208ENST00000497498 CD96P40200 585 aa6.67□□□□□ -1.34
CBX3-208ENST00000497498 POU5F2Q8N7G0 328 aa6.67□□□□□ -1.34
CBX3-208ENST00000497498 KCT2Q8NC54 265 aa6.67□□□□□ -1.34
CBX3-208ENST00000497498 GTF2IRD1Q9UHL9 959 aa6.67□□□□□ -1.34
CBX3-208ENST00000497498 ADAMTS6Q9UKP5 1117 aa6.67□□□□□ -1.34
CBX3-208ENST00000497498 BIN1O00499 593 aa6.66□□□□□ -1.34
CBX3-208ENST00000497498 EOMESO95936 686 aa6.66□□□□□ -1.34
CBX3-208ENST00000497498 RNASE1P07998 156 aaKnown RBP6.66□□□□□ -1.34
CBX3-208ENST00000497498 PTPN11Q06124 597 aaPredicted RBP6.66□□□□□ -1.34
CBX3-208ENST00000497498 INPP5AQ14642 412 aa6.66□□□□□ -1.34
CBX3-208ENST00000497498 CDC37L1Q7L3B6 337 aa6.66□□□□□ -1.34
CBX3-208ENST00000497498 CYFIP1Q7L576 1253 aa6.66□□□□□ -1.34
CBX3-208ENST00000497498 ATG4DQ86TL0 474 aaPredicted RBP6.66□□□□□ -1.34
CBX3-208ENST00000497498 PICK1Q9NRD5 415 aa6.66□□□□□ -1.34
CBX3-208ENST00000497498 PATL2C9JE40 543 aaKnown RBP6.65□□□□□ -1.34
CBX3-208ENST00000497498 ITIH2P19823 946 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 GNA15P30679 374 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 SPACA3Q8IXA5 215 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 PI4K2BQ8TCG2 481 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 GAL3ST3Q96A11 431 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 ELMO3Q96BJ8 720 aa6.65□□□□□ -1.34
CBX3-208ENST00000497498 PRPF40AO75400 957 aaKnown RBP6.64□□□□□ -1.35
CBX3-208ENST00000497498 LRIG2O94898 1065 aa6.64□□□□□ -1.35
CBX3-208ENST00000497498 CAP2P40123 477 aa6.64□□□□□ -1.35
CBX3-208ENST00000497498 NKPD1Q17RQ9 610 aa6.64□□□□□ -1.35
CBX3-208ENST00000497498 ANGEL2Q5VTE6 544 aaKnown RBP6.64□□□□□ -1.35
CBX3-208ENST00000497498 ARMCX6Q7L4S7 300 aa6.64□□□□□ -1.35
CBX3-208ENST00000497498 HDXQ7Z353 690 aa6.64□□□□□ -1.35
CBX3-208ENST00000497498 RC3H2Q9HBD1 1191 aaKnown RBP6.64□□□□□ -1.35
CBX3-208ENST00000497498 CARMIL2Q6F5E8 1435 aa6.64□□□□□ -1.35
CBX3-208ENST00000497498 ARID1BQ8NFD5 2236 aaPredicted RBP6.64□□□□□ -1.35
CBX3-208ENST00000497498 EIF4BP23588 611 aaKnown RBP6.63□□□□□ -1.35
CBX3-208ENST00000497498 SLBPQ14493 270 aaKnown RBP eCLIP6.63□□□□□ -1.35
CBX3-208ENST00000497498 SLC23A3Q6PIS1 610 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 ASB11Q8WXH4 323 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 PLPPR2Q96GM1 343 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 FBRSQ9HAH7 460 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 TTF2Q9UNY4 1162 aaKnown RBP6.63□□□□□ -1.35
CBX3-208ENST00000497498 MAPK8IP1Q9UQF2 711 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 SNCAIPQ9Y6H5 919 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 AK5Q9Y6K8 562 aa6.63□□□□□ -1.35
CBX3-208ENST00000497498 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.63□□□□□ -1.35
CBX3-208ENST00000497498 SLITRK5O94991 958 aa6.62□□□□□ -1.35
CBX3-208ENST00000497498 CLCN7P51798 805 aa6.62□□□□□ -1.35
CBX3-208ENST00000497498 RPS26P62854 115 aaKnown RBP6.62□□□□□ -1.35
CBX3-208ENST00000497498 TTBK2Q6IQ55 1244 aa6.62□□□□□ -1.35
CBX3-208ENST00000497498 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.62□□□□□ -1.35
CBX3-208ENST00000497498 LRRN4CLQ8ND94 238 aa6.62□□□□□ -1.35
CBX3-208ENST00000497498 PRDM5Q9NQX1 630 aaPredicted RBP6.62□□□□□ -1.35
CBX3-208ENST00000497498 PITPNM2Q9BZ72 1349 aa6.61□□□□□ -1.35
CBX3-208ENST00000497498 PRAMEF27A3QJZ7 478 aa6.61□□□□□ -1.35
CBX3-208ENST00000497498 GNAT3A8MTJ3 354 aa6.61□□□□□ -1.35
CBX3-208ENST00000497498 FGD1P98174 961 aa6.61□□□□□ -1.35
CBX3-208ENST00000497498 C22orf34Q6ZV56 151 aa6.61□□□□□ -1.35
CBX3-208ENST00000497498 FOXQ1Q9C009 403 aa6.61□□□□□ -1.35
CBX3-208ENST00000497498 C8AP07357 584 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 CDK8P49336 464 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 NKG7Q16617 165 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 WIPI1Q5MNZ9 446 aaPredicted RBP6.6□□□□□ -1.35
CBX3-208ENST00000497498 HID1Q8IV36 788 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 MFSD2AQ8NA29 543 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 FLAD1Q8NFF5 587 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 FAM168AQ92567 244 aa6.6□□□□□ -1.35
CBX3-208ENST00000497498 CNTNAP4Q9C0A0 1308 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 GFRA2O00451 464 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 ZNF865P0CJ78 1059 aaPredicted RBP6.59□□□□□ -1.35
CBX3-208ENST00000497498 IKZF1Q13422 519 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 FZD5Q13467 585 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 CCDC85BQ15834 202 aaPredicted RBP6.59□□□□□ -1.35
CBX3-208ENST00000497498 AGMOQ6ZNB7 445 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 TMEM40Q8WWA1 233 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 DUSP9Q99956 384 aaKnown RBP6.59□□□□□ -1.35
CBX3-208ENST00000497498 RNF19AQ9NV58 838 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 LMCD1Q9NZU5 365 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 TACC3Q9Y6A5 838 aa6.59□□□□□ -1.35
CBX3-208ENST00000497498 ANKRD33BA6NCL7 494 aa6.58□□□□□ -1.36
CBX3-208ENST00000497498 ETF1P62495 437 aaKnown RBP6.58□□□□□ -1.36
CBX3-208ENST00000497498 ZP2Q05996 745 aa6.58□□□□□ -1.36
CBX3-208ENST00000497498 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
CBX3-208ENST00000497498 SND1Q7KZF4 910 aaKnown RBP eCLIP6.58□□□□□ -1.36
CBX3-208ENST00000497498 PRDM7Q9NQW5 492 aa6.58□□□□□ -1.36
CBX3-208ENST00000497498 PCDHB5Q9Y5E4 795 aa6.58□□□□□ -1.36
CBX3-208ENST00000497498 KRTAP4-8A0A0G2JLE6 195 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 PRR33A8MZF0 331 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 CST3P01034 146 aaPredicted RBP6.57□□□□□ -1.36
CBX3-208ENST00000497498 GRK4P32298 578 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 LIG3P49916 1009 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 SFRP5Q5T4F7 317 aa6.57□□□□□ -1.36
CBX3-208ENST00000497498 LETMD1Q6P1Q0 360 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms