RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 GATAD2BQ8WXI9 593 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 C8orf48Q96LL4 319 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 TRIM56Q9BRZ2 755 aaKnown RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 COL25A1Q9BXS0 654 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 OXCT2Q9BYC2 517 aaPredicted RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 TRIM55Q9BYV6 548 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 KANSL2Q9H9L4 492 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 FANCLQ9NW38 375 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PKD2L1Q9P0L9 805 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 TTF2Q9UNY4 1162 aaKnown RBP3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 ADAMTS7Q9UKP4 1686 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRR36Q9H6K5 1346 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 TULP4Q9NRJ4 1543 aa3.39□□□□□ -1.87
CKS1BP2-201ENST00000497342 SPTBN5Q9NRC6 3674 aaKnown RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRAG1Q86YV5 1406 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 GADD45BO75293 160 aaPredicted RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 CILPO75339 1184 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 RGS20O76081 388 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 PF4P02776 101 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 FAM157BP0CG42 384 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 TFE3P19532 575 aaPredicted RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 CES1P23141 567 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 PLA2G4AP47712 749 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 GYS2P54840 703 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 TAF7LQ5H9L4 462 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 CEP120Q8N960 986 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 TMEM102Q8N9M5 508 aaPredicted RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 SMC1BQ8NDV3 1235 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 SNIP1Q8TAD8 396 aaKnown RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 NKD1Q969G9 470 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 HSH2DQ96JZ2 352 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 DNAJC7Q99615 494 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 TSEN34Q9BSV6 310 aaKnown RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 SLKQ9H2G2 1235 aaPredicted RBP3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 STK32BQ9NY57 414 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 UBP1Q9NZI7 540 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 ERVK-7P63135 1459 aa3.38□□□□□ -1.87
CKS1BP2-201ENST00000497342 CEP290O15078 2479 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 CCDC163A0A0D9SF12 145 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ESYT3A0FGR9 886 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 MEN1O00255 615 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 KIF3BO15066 747 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 SMAD7O15105 426 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 EIF3JO75822 258 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZIC2O95409 532 aaPredicted RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 EXOSC10Q01780 885 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 APOBRQ0VD83 1088 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 TCEA2Q15560 299 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 TM4SF20Q53R12 229 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 DALRD3Q5D0E6 543 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 SPRYD7Q5W111 196 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 CCSAPQ6IQ19 270 aaPredicted RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZNF598Q86UK7 904 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 CMTR1Q8N1G2 835 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 RNF217Q8TC41 542 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 FAM122AQ96E09 287 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 GSX2Q9BZM3 304 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 MCOLN1Q9GZU1 580 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 EHD4Q9H223 541 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZNF576Q9H609 170 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 LIN7BQ9HAP6 207 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 TOR4AQ9NXH8 423 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ACTR10Q9NZ32 417 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ADGRB3O60242 1522 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 SYCP2Q9BX26 1530 aa3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 RANBP2P49792 3224 aaKnown RBP3.37□□□□□ -1.87
CKS1BP2-201ENST00000497342 ADGRL3Q9HAR2 1447 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 RPRD2Q5VT52 1461 aaKnown RBP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 POLR3DP05423 398 aaPredicted RBP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 CELA3AP09093 270 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 BMP6P22004 513 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 MSX1P28360 303 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZNF165P49910 485 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 FCGRTP55899 365 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 EIF6P56537 245 aaKnown RBP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 SOX10P56693 466 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRR20EP86478 221 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRR20CP86479 221 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRR20DP86480 221 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRR20BP86481 221 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 PRR20AP86496 221 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 UBAP2LQ14157 1087 aaKnown RBP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 HLTFQ14527 1009 aaKnown RBP eCLIP3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 FXNQ16595 210 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 TMEM67Q5HYA8 995 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 TTBK2Q6IQ55 1244 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 REC114Q7Z4M0 266 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 THNSL2Q86YJ6 484 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 SMC5Q8IY18 1101 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 GOLM1Q8NBJ4 401 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 SLC39A13Q96H72 371 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 AGBL1Q96MI9 1066 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 ORAI2Q96SN7 254 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZKSCAN3Q9BRR0 538 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 EPN3Q9H201 632 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 ZFAND3Q9H8U3 227 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 SEC31BQ9NQW1 1179 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 CYP8B1Q9UNU6 501 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 MAPK8IP1Q9UQF2 711 aa3.36□□□□□ -1.87
CKS1BP2-201ENST00000497342 TACC3Q9Y6A5 838 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms