RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 OSBPP22059 807 aa21.01■□□□□ 0.95
SMC4-226ENST00000497311 AATFQ9NY61 560 aaKnown RBP eCLIP21.01■□□□□ 0.95
SMC4-226ENST00000497311 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.01■□□□□ 0.95
SMC4-226ENST00000497311 PHIPQ8WWQ0 1821 aa21■□□□□ 0.95
SMC4-226ENST00000497311 IGSF3O75054 1194 aa21■□□□□ 0.95
SMC4-226ENST00000497311 CCDC84Q86UT8 332 aaPredicted RBP21■□□□□ 0.95
SMC4-226ENST00000497311 RAET1EQ8TD07 263 aa21■□□□□ 0.95
SMC4-226ENST00000497311 PTPRFP10586 1907 aa21■□□□□ 0.95
SMC4-226ENST00000497311 ZAP70P43403 619 aa20.99■□□□□ 0.95
SMC4-226ENST00000497311 FCGRTP55899 365 aa20.99■□□□□ 0.95
SMC4-226ENST00000497311 PPP4CP60510 307 aa20.99■□□□□ 0.95
SMC4-226ENST00000497311 CCDC8Q9H0W5 538 aaPredicted RBP20.99■□□□□ 0.95
SMC4-226ENST00000497311 DHX36Q9H2U1 1008 aaKnown RBP20.99■□□□□ 0.95
SMC4-226ENST00000497311 HERC5Q9UII4 1024 aaKnown RBP20.99■□□□□ 0.95
SMC4-226ENST00000497311 DBNLQ9UJU6 430 aaKnown RBP20.99■□□□□ 0.95
SMC4-226ENST00000497311 MYPNQ86TC9 1320 aa20.99■□□□□ 0.95
SMC4-226ENST00000497311 CAP2P40123 477 aa20.98■□□□□ 0.95
SMC4-226ENST00000497311 CEP85Q6P2H3 762 aa20.98■□□□□ 0.95
SMC4-226ENST00000497311 SMCR8Q8TEV9 937 aaPredicted RBP20.98■□□□□ 0.95
SMC4-226ENST00000497311 TGFBRAP1Q8WUH2 860 aa20.98■□□□□ 0.95
SMC4-226ENST00000497311 EAF2Q96CJ1 260 aaPredicted RBP20.98■□□□□ 0.95
SMC4-226ENST00000497311 TBC1D2Q9BYX2 928 aa20.98■□□□□ 0.95
SMC4-226ENST00000497311 PI4KBQ9UBF8 816 aa20.98■□□□□ 0.95
SMC4-226ENST00000497311 AGTPBP1Q9UPW5 1226 aa20.98■□□□□ 0.95
SMC4-226ENST00000497311 GRK4P32298 578 aa20.97■□□□□ 0.95
SMC4-226ENST00000497311 ADGRA1Q86SQ6 560 aa20.97■□□□□ 0.95
SMC4-226ENST00000497311 ZNF280CQ8ND82 737 aa20.97■□□□□ 0.95
SMC4-226ENST00000497311 PANK1Q8TE04 598 aa20.97■□□□□ 0.95
SMC4-226ENST00000497311 TLR7Q9NYK1 1049 aaKnown RBP20.97■□□□□ 0.95
SMC4-226ENST00000497311 MAST2Q6P0Q8 1798 aa20.97■□□□□ 0.95
SMC4-226ENST00000497311 SPP2Q13103 211 aa20.96■□□□□ 0.95
SMC4-226ENST00000497311 ERC1Q8IUD2 1116 aa20.96■□□□□ 0.95
SMC4-226ENST00000497311 MAPKAPK5Q8IW41 473 aa20.96■□□□□ 0.95
SMC4-226ENST00000497311 PROCA1Q8NCQ7 364 aaPredicted RBP20.96■□□□□ 0.95
SMC4-226ENST00000497311 PIH1D3Q9NQM4 214 aaKnown RBP20.96■□□□□ 0.95
SMC4-226ENST00000497311 PNMA3Q9UL41 463 aa20.96■□□□□ 0.95
SMC4-226ENST00000497311 MGAMO43451 1857 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 MYO5AQ9Y4I1 1855 aaKnown RBP20.95■□□□□ 0.94
SMC4-226ENST00000497311 USP17L5A8MUK1 530 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 MS4A1P11836 297 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 PRKCZQ05513 592 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 RRP1BQ14684 758 aaKnown RBP20.95■□□□□ 0.94
SMC4-226ENST00000497311 TREML2Q5T2D2 321 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 AS3MTQ9HBK9 375 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 FLT1P17948 1338 aa20.95■□□□□ 0.94
SMC4-226ENST00000497311 MTFR1Q15390 333 aa20.94■□□□□ 0.94
SMC4-226ENST00000497311 FOXP4Q8IVH2 680 aaPredicted RBP20.94■□□□□ 0.94
SMC4-226ENST00000497311 GCC1Q96CN9 775 aa20.94■□□□□ 0.94
SMC4-226ENST00000497311 TRIM34Q9BYJ4 488 aa20.94■□□□□ 0.94
SMC4-226ENST00000497311 BIN2Q9UBW5 565 aaPredicted RBP20.94■□□□□ 0.94
SMC4-226ENST00000497311 EXOC6BQ9Y2D4 811 aa20.94■□□□□ 0.94
SMC4-226ENST00000497311 ATAD5Q96QE3 1844 aa20.94■□□□□ 0.94
SMC4-226ENST00000497311 IDH1O75874 414 aaKnown RBP20.93■□□□□ 0.94
SMC4-226ENST00000497311 CYP7A1P22680 504 aa20.93■□□□□ 0.94
SMC4-226ENST00000497311 HMGCS2P54868 508 aa20.93■□□□□ 0.94
SMC4-226ENST00000497311 UBXN2AP68543 259 aa20.93■□□□□ 0.94
SMC4-226ENST00000497311 PABPC4Q13310 644 aaKnown RBP eCLIP20.93■□□□□ 0.94
SMC4-226ENST00000497311 HSP90AB4PQ58FF6 505 aa20.93■□□□□ 0.94
SMC4-226ENST00000497311 CRACR2BQ8N4Y2 399 aaPredicted RBP20.93■□□□□ 0.94
SMC4-226ENST00000497311 PALD1Q9ULE6 856 aa20.93■□□□□ 0.94
SMC4-226ENST00000497311 GABRQQ9UN88 632 aa20.93■□□□□ 0.94
SMC4-226ENST00000497311 TNPO2O14787 897 aaKnown RBP20.92■□□□□ 0.94
SMC4-226ENST00000497311 ASNSP08243 561 aa20.92■□□□□ 0.94
SMC4-226ENST00000497311 DYNLL1P63167 89 aaKnown RBP20.92■□□□□ 0.94
SMC4-226ENST00000497311 AACSQ86V21 672 aa20.92■□□□□ 0.94
SMC4-226ENST00000497311 METTL16Q86W50 562 aaKnown RBP20.92■□□□□ 0.94
SMC4-226ENST00000497311 ANKRD13CQ8N6S4 541 aa20.92■□□□□ 0.94
SMC4-226ENST00000497311 SLAIN1Q8ND83 568 aa20.92■□□□□ 0.94
SMC4-226ENST00000497311 SIPA1L1O43166 1804 aa20.91■□□□□ 0.94
SMC4-226ENST00000497311 HLA-DOAP06340 250 aa20.91■□□□□ 0.94
SMC4-226ENST00000497311 SH3D19Q5HYK7 790 aa20.91■□□□□ 0.94
SMC4-226ENST00000497311 CERS3Q8IU89 383 aa20.91■□□□□ 0.94
SMC4-226ENST00000497311 NKX2-3Q8TAU0 364 aa20.91■□□□□ 0.94
SMC4-226ENST00000497311 CDK5RAP2Q96SN8 1893 aa20.91■□□□□ 0.94
SMC4-226ENST00000497311 FOCADQ5VW36 1801 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 ADCY3O60266 1144 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 CCL5P13501 91 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 GCLCP48506 637 aaPredicted RBP20.9■□□□□ 0.94
SMC4-226ENST00000497311 FLT3LGP49771 235 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 MAP3K12Q12852 859 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 FAM110CQ1W6H9 321 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 MAGEB6Q8N7X4 407 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 WDR18Q9BV38 432 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 DNAJC18Q9H819 358 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 GINM1Q9NU53 330 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 SAP30BPQ9UHR5 308 aaKnown RBP20.9■□□□□ 0.94
SMC4-226ENST00000497311 NDUFB9Q9Y6M9 179 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 LOC285556D6RIA3 1793 aa20.9■□□□□ 0.94
SMC4-226ENST00000497311 TMED8Q6PL24 325 aaPredicted RBP20.89■□□□□ 0.93
SMC4-226ENST00000497311 MIGA1Q8NAN2 632 aa20.89■□□□□ 0.93
SMC4-226ENST00000497311 RHPN1Q8TCX5 695 aa20.89■□□□□ 0.93
SMC4-226ENST00000497311 COA7Q96BR5 231 aa20.89■□□□□ 0.93
SMC4-226ENST00000497311 RNF208Q9H0X6 261 aa20.89■□□□□ 0.93
SMC4-226ENST00000497311 ASCC2Q9H1I8 757 aaPredicted RBP20.89■□□□□ 0.93
SMC4-226ENST00000497311 ANTXR1Q9H6X2 564 aa20.89■□□□□ 0.93
SMC4-226ENST00000497311 IL1RAPL2Q9NP60 686 aa20.89■□□□□ 0.93
SMC4-226ENST00000497311 GDF11O95390 407 aa20.88■□□□□ 0.93
SMC4-226ENST00000497311 GJB1P08034 283 aa20.88■□□□□ 0.93
SMC4-226ENST00000497311 USP5P45974 858 aa20.88■□□□□ 0.93
SMC4-226ENST00000497311 BACE1P56817 501 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms