RNA–Protein interactions for RNA: ENST00000497269.5

MSH5-219, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 764 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-219ENST00000497269 EIF4BP23588 611 aaKnown RBP8.81□□□□□ -1
MSH5-219ENST00000497269 PRRT3Q5FWE3 981 aa8.81□□□□□ -1
MSH5-219ENST00000497269 LRRC59Q96AG4 307 aaKnown RBP8.81□□□□□ -1
MSH5-219ENST00000497269 ZNF428Q96B54 188 aa8.81□□□□□ -1
MSH5-219ENST00000497269 VTI1BQ9UEU0 232 aa8.81□□□□□ -1
MSH5-219ENST00000497269 PIK3R4Q99570 1358 aa8.81□□□□□ -1
MSH5-219ENST00000497269 MST1RQ04912 1400 aa8.8□□□□□ -1
MSH5-219ENST00000497269 NAIPQ13075 1403 aa8.8□□□□□ -1
MSH5-219ENST00000497269 NCOA3Q9Y6Q9 1424 aa8.8□□□□□ -1
MSH5-219ENST00000497269 ASXL1Q8IXJ9 1541 aa8.8□□□□□ -1
MSH5-219ENST00000497269 SPDYE3A6NKU9 549 aa8.8□□□□□ -1
MSH5-219ENST00000497269 FSCN2O14926 492 aa8.8□□□□□ -1
MSH5-219ENST00000497269 DEAF1O75398 565 aaPredicted RBP8.8□□□□□ -1
MSH5-219ENST00000497269 FGD1P98174 961 aa8.8□□□□□ -1
MSH5-219ENST00000497269 PCDH1Q08174 1060 aa8.8□□□□□ -1
MSH5-219ENST00000497269 TMEM132EQ6IEE7 984 aa8.8□□□□□ -1
MSH5-219ENST00000497269 PRPF40BQ6NWY9 871 aaKnown RBP8.8□□□□□ -1
MSH5-219ENST00000497269 FMR1NBQ8N0W7 255 aaPredicted RBP8.8□□□□□ -1
MSH5-219ENST00000497269 GALNT11Q8NCW6 608 aa8.8□□□□□ -1
MSH5-219ENST00000497269 ZNF576Q9H609 170 aa8.8□□□□□ -1
MSH5-219ENST00000497269 GPN3Q9UHW5 284 aaPredicted RBP8.8□□□□□ -1
MSH5-219ENST00000497269 DIP2AQ14689 1571 aa8.8□□□□□ -1
MSH5-219ENST00000497269 AHDC1Q5TGY3 1603 aaPredicted RBP8.8□□□□□ -1
MSH5-219ENST00000497269 ROBO2Q9HCK4 1378 aa8.79□□□□□ -1
MSH5-219ENST00000497269 RNF225M0QZC1 329 aaPredicted RBP8.79□□□□□ -1
MSH5-219ENST00000497269 SOX1O00570 391 aaPredicted RBP8.79□□□□□ -1
MSH5-219ENST00000497269 DDX3YO15523 660 aaKnown RBP8.79□□□□□ -1
MSH5-219ENST00000497269 NLRP12P59046 1061 aa8.79□□□□□ -1
MSH5-219ENST00000497269 DAB2P98082 770 aa8.79□□□□□ -1
MSH5-219ENST00000497269 SETDB1Q15047 1291 aa8.79□□□□□ -1
MSH5-219ENST00000497269 SHISA2Q6UWI4 295 aa8.79□□□□□ -1
MSH5-219ENST00000497269 TPTE2Q6XPS3 522 aa8.79□□□□□ -1
MSH5-219ENST00000497269 WAPLQ7Z5K2 1190 aa8.79□□□□□ -1
MSH5-219ENST00000497269 CLEC4MQ9H2X3 399 aaPredicted RBP8.79□□□□□ -1
MSH5-219ENST00000497269 KIF1BO60333 1816 aa8.79□□□□□ -1
MSH5-219ENST00000497269 XRN1Q8IZH2 1706 aaKnown RBP8.79□□□□□ -1
MSH5-219ENST00000497269 NEXMIFQ5QGS0 1516 aa8.79□□□□□ -1
MSH5-219ENST00000497269 SETBP1Q9Y6X0 1596 aa8.78□□□□□ -1
MSH5-219ENST00000497269 NALCNQ8IZF0 1738 aa8.78□□□□□ -1
MSH5-219ENST00000497269 SORBS3O60504 671 aa8.78□□□□□ -1
MSH5-219ENST00000497269 ESRRAP11474 423 aaPredicted RBP8.78□□□□□ -1
MSH5-219ENST00000497269 GSTT1P30711 240 aa8.78□□□□□ -1
MSH5-219ENST00000497269 GSTM4Q03013 218 aa8.78□□□□□ -1
MSH5-219ENST00000497269 ZNF423Q2M1K9 1284 aa8.78□□□□□ -1
MSH5-219ENST00000497269 CACTIN-AS1Q8N1I8 211 aa8.78□□□□□ -1
MSH5-219ENST00000497269 KLHDC7BQ96G42 594 aa8.78□□□□□ -1
MSH5-219ENST00000497269 FAM8A1Q9UBU6 413 aa8.78□□□□□ -1
MSH5-219ENST00000497269 TTF2Q9UNY4 1162 aaKnown RBP8.78□□□□□ -1
MSH5-219ENST00000497269 AK5Q9Y6K8 562 aa8.78□□□□□ -1
MSH5-219ENST00000497269 SHPRHQ149N8 1683 aa8.78□□□□□ -1
MSH5-219ENST00000497269 ADGRF5Q8IZF2 1346 aa8.78□□□□□ -1
MSH5-219ENST00000497269 PNPLA6Q8IY17 1366 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 ITPKAP23677 461 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 FAAP100Q0VG06 881 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 TMC4Q7Z404 712 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 SEC31BQ9NQW1 1179 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 ADGRL3Q9HAR2 1447 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
MSH5-219ENST00000497269 ARL4DP49703 201 aa8.76□□□□□ -1.01
MSH5-219ENST00000497269 SAFB2Q14151 953 aaKnown RBP eCLIP8.76□□□□□ -1.01
MSH5-219ENST00000497269 MEI1Q5TIA1 1274 aa8.76□□□□□ -1.01
MSH5-219ENST00000497269 C3orf58Q8NDZ4 430 aa8.76□□□□□ -1.01
MSH5-219ENST00000497269 KCNK4Q9NYG8 393 aa8.76□□□□□ -1.01
MSH5-219ENST00000497269 USP21Q9UK80 565 aa8.76□□□□□ -1.01
MSH5-219ENST00000497269 RRBP1Q9P2E9 1410 aaKnown RBP8.76□□□□□ -1.01
MSH5-219ENST00000497269 SETD5Q9C0A6 1442 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 GIPC1O14908 333 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 SPATA31C1P0DKV0 1188 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 RBM25P49756 843 aaKnown RBP8.75□□□□□ -1.01
MSH5-219ENST00000497269 C19orf57Q0VDD7 668 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 FOXD4L6Q3SYB3 417 aaPredicted RBP8.75□□□□□ -1.01
MSH5-219ENST00000497269 FOXD4L3Q6VB84 417 aaPredicted RBP8.75□□□□□ -1.01
MSH5-219ENST00000497269 FBXO11Q86XK2 927 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 FRMD6Q96NE9 622 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 USP26Q9BXU7 913 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 SRCIN1Q9C0H9 1055 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 NHSL1Q5SYE7 1610 aa8.75□□□□□ -1.01
MSH5-219ENST00000497269 RBM47A0AV96 593 aaKnown RBP8.74□□□□□ -1.01
MSH5-219ENST00000497269 APBA3O96018 575 aa8.74□□□□□ -1.01
MSH5-219ENST00000497269 CD68P34810 354 aaPredicted RBP8.74□□□□□ -1.01
MSH5-219ENST00000497269 RBM6P78332 1123 aaKnown RBP8.74□□□□□ -1.01
MSH5-219ENST00000497269 DTWD1Q8N5C7 304 aa8.74□□□□□ -1.01
MSH5-219ENST00000497269 UBASH3BQ8TF42 649 aa8.74□□□□□ -1.01
MSH5-219ENST00000497269 MPHOSPH9Q99550 1183 aa8.74□□□□□ -1.01
MSH5-219ENST00000497269 PLEKHH1Q9ULM0 1364 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 RGS12O14924 1447 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 DCCP43146 1447 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 UNCXA6NJT0 531 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 ADAM11O75078 769 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 WISP1O95388 367 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 CTSHP09668 335 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 ELNP15502 786 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 RASSF7Q02833 373 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 DCAF5Q96JK2 942 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 ZC3H12CQ9C0D7 883 aaKnown RBP8.73□□□□□ -1.01
MSH5-219ENST00000497269 BCL11AQ9H165 835 aa8.73□□□□□ -1.01
MSH5-219ENST00000497269 KRBA1A5PL33 1030 aa8.72□□□□□ -1.01
MSH5-219ENST00000497269 XRCC5P13010 732 aaKnown RBP8.72□□□□□ -1.01
MSH5-219ENST00000497269 SUZ12Q15022 739 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms