RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 KIAA0825Q8IV33 1275 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 EVI5LQ96CN4 794 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 ZDHHC15Q96MV8 337 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 LNPKQ9C0E8 428 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 KCNQ5Q9NR82 932 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 PAG1Q9NWQ8 432 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 RAI14Q9P0K7 980 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 TAOK2Q9UL54 1235 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 IQSEC3Q9UPP2 1182 aaPredicted RBP7.35□□□□□ -1.23
HMGCL-206ENST00000496907 PPP2R3BQ9Y5P8 575 aa7.35□□□□□ -1.23
HMGCL-206ENST00000496907 ASTN2O75129 1339 aaPredicted RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 TMEM265A0A087WTH1 108 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 GPR25O00155 361 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 SMARCA5O60264 1052 aaPredicted RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 FKTNO75072 461 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 CYP2E1P05181 493 aaPredicted RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 ZAP70P43403 619 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 CRKP46108 304 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 PPP4CP60510 307 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 MKRN3Q13064 507 aaKnown RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 TTLL12Q14166 644 aaPredicted RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 UBE3CQ15386 1083 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 CFAP100Q494V2 611 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 NAA16Q6N069 864 aaPredicted RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 BOLA2Q9H3K6 86 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 STXBP5LQ9Y2K9 1186 aa7.34□□□□□ -1.23
HMGCL-206ENST00000496907 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.34□□□□□ -1.23
HMGCL-206ENST00000496907 GPR75-ASB3A0A0A6YYF3 556 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 F8W031 263 aaPredicted RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 GOLIM4O00461 696 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 WNT10BO00744 389 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 IDH1O75874 414 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 NF2P35240 595 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 MFAP1P55081 439 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 MECOMQ03112 1051 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 SCARF1Q14162 830 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 SUPT20HL1Q3ZLR7 823 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 SLC9C2Q5TAH2 1124 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 ANGEL2Q5VTE6 544 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 MOB2Q70IA6 237 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 FAM83AQ86UY5 434 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 PLEKHM2Q8IWE5 1019 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 CERS5Q8N5B7 392 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 EFCAB3Q8N7B9 438 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 KBTBD3Q8NAB2 608 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 NSUN4Q96CB9 384 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 DDRGK1Q96HY6 314 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 DNAJC2Q99543 621 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 BCL11AQ9H165 835 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 SNRKQ9NRH2 765 aa7.33□□□□□ -1.24
HMGCL-206ENST00000496907 TLR7Q9NYK1 1049 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 RBBP6Q7Z6E9 1792 aaKnown RBP7.33□□□□□ -1.24
HMGCL-206ENST00000496907 SALL3Q9BXA9 1300 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 UNCXA6NJT0 531 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 TRIM6-TRIM34B2RNG4 842 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 UBE2Q2LH0YL09 131 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 MYCP01106 439 aaPredicted RBP7.32□□□□□ -1.24
HMGCL-206ENST00000496907 GNAT2P19087 354 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 PRDX5P30044 214 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 FKBP1BP68106 108 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 SREBF2Q12772 1141 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 PI4K2BQ8TCG2 481 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 RUFY2Q8WXA3 655 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 DPF3Q92784 378 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 ZBED3Q96IU2 234 aaPredicted RBP7.32□□□□□ -1.24
HMGCL-206ENST00000496907 DHX36Q9H2U1 1008 aaKnown RBP7.32□□□□□ -1.24
HMGCL-206ENST00000496907 TRIM17Q9Y577 477 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 LAMA2P24043 3122 aaKnown RBP7.32□□□□□ -1.24
HMGCL-206ENST00000496907 COL4A1P02462 1669 aa7.32□□□□□ -1.24
HMGCL-206ENST00000496907 MROH7-TTC4A0A0A0MT08 1334 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 GAKO14976 1311 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 RNF113AO15541 343 aaKnown RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 ENTPD3O75355 529 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 CYP7A1P22680 504 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 NOM1Q5C9Z4 860 aaKnown RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 APOBEC3HQ6NTF7 200 aaKnown RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 CASC1Q6TDU7 716 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 TBC1D9Q6ZT07 1266 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 AMOTL1Q8IY63 956 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 MAGEB6Q8N7X4 407 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 APPBP2Q92624 585 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 PRMT6Q96LA8 375 aaPredicted RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 MXD3Q9BW11 206 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 IDI2Q9BXS1 227 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 CRNKL1Q9BZJ0 848 aaKnown RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 HELLSQ9NRZ9 838 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 USP40Q9NVE5 1235 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 SCAF8Q9UPN6 1271 aaKnown RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 SCN9AQ15858 1988 aa7.31□□□□□ -1.24
HMGCL-206ENST00000496907 RPAP1Q9BWH6 1393 aaPredicted RBP7.31□□□□□ -1.24
HMGCL-206ENST00000496907 PRUNE2Q8WUY3 3088 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 PIEZO1Q92508 2521 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 MAGEB6P1A0A0J9YX57 407 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 PPP1R12BO60237 982 aaPredicted RBP7.3□□□□□ -1.24
HMGCL-206ENST00000496907 PDE6AP16499 860 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 ADD2P35612 726 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 TM4SF4P48230 202 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 NBPF9Q3BBW0 867 aa7.3□□□□□ -1.24
HMGCL-206ENST00000496907 PRAMEF18Q5VWM3 479 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms