RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 EGFRP00533 1210 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 NF2P35240 595 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 KIF23Q02241 960 aaPredicted RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 USP17L24Q0WX57 530 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 ANGEL2Q5VTE6 544 aaKnown RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 CTU1Q7Z7A3 348 aaKnown RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 ANKRD18AQ8IVF6 992 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 OGFOD1Q8N543 542 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 STK32AQ8WU08 396 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 MRGPRX2Q96LB1 330 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 MYD88Q99836 296 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 ANP32EQ9BTT0 268 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 TMPRSS4Q9NRS4 437 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 CWC25Q9NXE8 425 aaPredicted RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 CDV3Q9UKY7 258 aaKnown RBP7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
CACNA1C-229ENST00000496818 MED23Q9ULK4 1368 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 LAMB2P55268 1798 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 PAPPA2Q9BXP8 1791 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 ERVH48-1M5A8F1 160 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 TRPA1O75762 1119 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 VIL1P09327 827 aaKnown RBP7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 ATP2B4P23634 1241 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 FSHRP23945 695 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 SOX10P56693 466 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 ZNF280AP59817 542 aaPredicted RBP7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 CLDN10P78369 228 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 TRIM28Q13263 835 aaKnown RBP7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 SPRYD7Q5W111 196 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 PODNQ7Z5L7 613 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 RASAL3Q86YV0 1011 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 CCDC191Q8NCU4 936 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 MYOZ2Q9NPC6 264 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 MBIPQ9NS73 344 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 IFT57Q9NWB7 429 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 RNF186Q9NXI6 227 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 HDAC9Q9UKV0 1011 aa7.34□□□□□ -1.23
CACNA1C-229ENST00000496818 TRPM7Q96QT4 1865 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 SIAH2O43255 324 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 LZTS3O60299 673 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 PCCAP05165 728 aaPredicted RBP7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 GRM5P41594 1212 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 SCTRP47872 440 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 CTSWP56202 376 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 GNAI1P63096 354 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 GTF2IP78347 998 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 NEXNQ0ZGT2 675 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 SREBF2Q12772 1141 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 PTK7Q13308 1070 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 SCARF1Q14162 830 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 PKN2Q16513 984 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 ZNF697Q5TEC3 545 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 TMEM164Q5U3C3 297 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 ZIC5Q96T25 663 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 PRKD2Q9BZL6 878 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 SEC31BQ9NQW1 1179 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 DNAAF2Q9NVR5 837 aaKnown RBP7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 KIAA1024Q9UPX6 916 aa7.33□□□□□ -1.24
CACNA1C-229ENST00000496818 COL1A1P02452 1464 aaPredicted RBP7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 FAM196BA6NMK8 535 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 LGR5O75473 907 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 IGHMBP2P38935 993 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 DPYDQ12882 1025 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 USP4Q13107 963 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 CCDC30Q5VVM6 783 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 DLK2Q6UY11 383 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 TRIM50Q86XT4 487 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 APOBEC3FQ8IUX4 373 aaKnown RBP7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 FAM200AQ8TCP9 573 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 STK31Q9BXU1 1019 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 MAP4K5Q9Y4K4 846 aa7.32□□□□□ -1.24
CACNA1C-229ENST00000496818 ASTN2O75129 1339 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 WNT7AO00755 349 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 ZBTB7BO15156 539 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 ALDH1A1P00352 501 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 KCNJ4P48050 445 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 MMP14P50281 582 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 ATP1A2P50993 1020 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 PDE4CQ08493 712 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 ARMC9Q7Z3E5 817 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 ANKMY2Q8IV38 441 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 CDK15Q96Q40 435 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 CSRNP1Q96S65 589 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 METTL22Q9BUU2 404 aaPredicted RBP7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 COA1Q9GZY4 146 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 PHAXQ9H814 394 aaKnown RBP7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 CYLDQ9NQC7 956 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 KCNQ5Q9NR82 932 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 USTQ9Y2C2 406 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 MAP3K2Q9Y2U5 619 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 COL4A1P02462 1669 aa7.31□□□□□ -1.24
CACNA1C-229ENST00000496818 SFI1A8K8P3 1242 aa7.3□□□□□ -1.24
CACNA1C-229ENST00000496818 ELL2O00472 640 aaPredicted RBP7.3□□□□□ -1.24
CACNA1C-229ENST00000496818 STAU1O95793 577 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-229ENST00000496818 MYCP01106 439 aaPredicted RBP7.3□□□□□ -1.24
CACNA1C-229ENST00000496818 ELOAQ14241 798 aaKnown RBP7.3□□□□□ -1.24
CACNA1C-229ENST00000496818 STRIP1Q5VSL9 837 aa7.3□□□□□ -1.24
CACNA1C-229ENST00000496818 CCDC102BQ68D86 513 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms