RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 YTHDC1Q96MU7 727 aaKnown RBP23.81■■□□□ 1.4
COL20A1-208ENST00000496810 DNAJC18Q9H819 358 aa23.81■■□□□ 1.4
COL20A1-208ENST00000496810 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.81■■□□□ 1.4
COL20A1-208ENST00000496810 PICK1Q9NRD5 415 aa23.81■■□□□ 1.4
COL20A1-208ENST00000496810 ADGRA2Q96PE1 1338 aa23.81■■□□□ 1.4
COL20A1-208ENST00000496810 TBC1D12O60347 775 aa23.8■■□□□ 1.4
COL20A1-208ENST00000496810 BAG3O95817 575 aa23.8■■□□□ 1.4
COL20A1-208ENST00000496810 SHROOM1Q2M3G4 852 aaPredicted RBP23.8■■□□□ 1.4
COL20A1-208ENST00000496810 GPAT2Q6NUI2 795 aa23.8■■□□□ 1.4
COL20A1-208ENST00000496810 ARHGAP39Q9C0H5 1083 aa23.8■■□□□ 1.4
COL20A1-208ENST00000496810 SAP30BPQ9UHR5 308 aaKnown RBP23.8■■□□□ 1.4
COL20A1-208ENST00000496810 MGAMO43451 1857 aa23.79■■□□□ 1.4
COL20A1-208ENST00000496810 PDHXO00330 501 aa23.79■■□□□ 1.4
COL20A1-208ENST00000496810 SMARCA5O60264 1052 aaPredicted RBP23.79■■□□□ 1.4
COL20A1-208ENST00000496810 CTNND1O60716 968 aaKnown RBP23.79■■□□□ 1.4
COL20A1-208ENST00000496810 RAB11FIP3O75154 756 aa23.79■■□□□ 1.4
COL20A1-208ENST00000496810 IFIT2P09913 472 aaKnown RBP23.79■■□□□ 1.4
COL20A1-208ENST00000496810 ANKRD23Q86SG2 305 aa23.79■■□□□ 1.4
COL20A1-208ENST00000496810 DNAJC2Q99543 621 aaKnown RBP23.79■■□□□ 1.4
COL20A1-208ENST00000496810 ZCCHC17Q9NP64 241 aaKnown RBP23.79■■□□□ 1.4
COL20A1-208ENST00000496810 PALD1Q9ULE6 856 aa23.79■■□□□ 1.4
COL20A1-208ENST00000496810 AFG3L2Q9Y4W6 797 aa23.79■■□□□ 1.4
COL20A1-208ENST00000496810 A0A0G2JLL6 359 aaPredicted RBP23.78■■□□□ 1.4
COL20A1-208ENST00000496810 TLR2O60603 784 aa23.78■■□□□ 1.4
COL20A1-208ENST00000496810 ECM2O94769 699 aaPredicted RBP23.78■■□□□ 1.4
COL20A1-208ENST00000496810 PLCG2P16885 1265 aa23.78■■□□□ 1.4
COL20A1-208ENST00000496810 RGS19P49795 217 aa23.78■■□□□ 1.4
COL20A1-208ENST00000496810 PRRT2Q7Z6L0 340 aaPredicted RBP23.78■■□□□ 1.4
COL20A1-208ENST00000496810 CHMP4BQ9H444 224 aaKnown RBP23.78■■□□□ 1.4
COL20A1-208ENST00000496810 TRIM75PA6NK02 468 aa23.77■■□□□ 1.4
COL20A1-208ENST00000496810 GOLIM4O00461 696 aa23.77■■□□□ 1.4
COL20A1-208ENST00000496810 JAG1P78504 1218 aa23.77■■□□□ 1.4
COL20A1-208ENST00000496810 EFCC1Q9HA90 598 aa23.77■■□□□ 1.4
COL20A1-208ENST00000496810 CPA4Q9UI42 421 aa23.77■■□□□ 1.4
COL20A1-208ENST00000496810 KIAA0100Q14667 2235 aaKnown RBP23.76■■□□□ 1.39
COL20A1-208ENST00000496810 CXCL11O14625 94 aa23.76■■□□□ 1.39
COL20A1-208ENST00000496810 CYP2C8P10632 490 aa23.76■■□□□ 1.39
COL20A1-208ENST00000496810 CTGFP29279 349 aa23.76■■□□□ 1.39
COL20A1-208ENST00000496810 MAP3K12Q12852 859 aa23.76■■□□□ 1.39
COL20A1-208ENST00000496810 SLFNL1Q499Z3 407 aa23.76■■□□□ 1.39
COL20A1-208ENST00000496810 RBBP6Q7Z6E9 1792 aaKnown RBP23.75■■□□□ 1.39
COL20A1-208ENST00000496810 BAZ2AQ9UIF9 1905 aaKnown RBP23.75■■□□□ 1.39
COL20A1-208ENST00000496810 CHGBP05060 677 aa23.75■■□□□ 1.39
COL20A1-208ENST00000496810 PDE6AP16499 860 aa23.75■■□□□ 1.39
COL20A1-208ENST00000496810 RRP1P56182 461 aaKnown RBP23.75■■□□□ 1.39
COL20A1-208ENST00000496810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.75■■□□□ 1.39
COL20A1-208ENST00000496810 RIOK1Q9BRS2 568 aaKnown RBP23.75■■□□□ 1.39
COL20A1-208ENST00000496810 PI4KBQ9UBF8 816 aa23.75■■□□□ 1.39
COL20A1-208ENST00000496810 PTPN22Q9Y2R2 807 aa23.75■■□□□ 1.39
COL20A1-208ENST00000496810 PDE4DIPQ5VU43 2346 aa23.75■■□□□ 1.39
COL20A1-208ENST00000496810 CAP2P40123 477 aa23.74■■□□□ 1.39
COL20A1-208ENST00000496810 LACTBP83111 547 aaPredicted RBP23.74■■□□□ 1.39
COL20A1-208ENST00000496810 C17orf99Q6UX52 265 aa23.74■■□□□ 1.39
COL20A1-208ENST00000496810 GADL1Q6ZQY3 521 aa23.74■■□□□ 1.39
COL20A1-208ENST00000496810 BOLA2Q9H3K6 86 aa23.74■■□□□ 1.39
COL20A1-208ENST00000496810 HERC5Q9UII4 1024 aaKnown RBP23.74■■□□□ 1.39
COL20A1-208ENST00000496810 TCRBV5S4A2TA0A5A2 114 aa23.73■■□□□ 1.39
COL20A1-208ENST00000496810 IGSF3O75054 1194 aa23.73■■□□□ 1.39
COL20A1-208ENST00000496810 EVX2Q03828 476 aa23.73■■□□□ 1.39
COL20A1-208ENST00000496810 LRRCC1Q9C099 1032 aa23.73■■□□□ 1.39
COL20A1-208ENST00000496810 DHX36Q9H2U1 1008 aaKnown RBP23.73■■□□□ 1.39
COL20A1-208ENST00000496810 MLLT1Q03111 559 aaPredicted RBP23.72■■□□□ 1.39
COL20A1-208ENST00000496810 TREML2Q5T2D2 321 aa23.72■■□□□ 1.39
COL20A1-208ENST00000496810 SLC9C2Q5TAH2 1124 aa23.72■■□□□ 1.39
COL20A1-208ENST00000496810 METTL16Q86W50 562 aaKnown RBP23.72■■□□□ 1.39
COL20A1-208ENST00000496810 PCDHB15Q9Y5E8 787 aa23.72■■□□□ 1.39
COL20A1-208ENST00000496810 PTCH2Q9Y6C5 1203 aa23.72■■□□□ 1.39
COL20A1-208ENST00000496810 ZNF532Q9HCE3 1301 aa23.72■■□□□ 1.39
COL20A1-208ENST00000496810 GDF11O95390 407 aa23.71■■□□□ 1.39
COL20A1-208ENST00000496810 ATP5JP18859 108 aa23.71■■□□□ 1.39
COL20A1-208ENST00000496810 SPP2Q13103 211 aa23.71■■□□□ 1.39
COL20A1-208ENST00000496810 TTF1Q15361 905 aaPredicted RBP23.71■■□□□ 1.39
COL20A1-208ENST00000496810 PARK7Q99497 189 aaKnown RBP23.71■■□□□ 1.39
COL20A1-208ENST00000496810 PAG1Q9NWQ8 432 aa23.71■■□□□ 1.39
COL20A1-208ENST00000496810 MYH8P13535 1937 aa23.71■■□□□ 1.39
COL20A1-208ENST00000496810 USP5P45974 858 aa23.7■■□□□ 1.38
COL20A1-208ENST00000496810 TSHZ3Q63HK5 1081 aa23.7■■□□□ 1.38
COL20A1-208ENST00000496810 CRACR2BQ8N4Y2 399 aaPredicted RBP23.7■■□□□ 1.38
COL20A1-208ENST00000496810 MAGEB6P1A0A0J9YX57 407 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 BCRP11274 1271 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 FASTKD5Q7L8L6 764 aaKnown RBP23.69■■□□□ 1.38
COL20A1-208ENST00000496810 LCORLQ8N3X6 602 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 ZNF280CQ8ND82 737 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 HAUS7Q99871 368 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 DCTPP1Q9H773 170 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 DOCK3Q8IZD9 2030 aa23.69■■□□□ 1.38
COL20A1-208ENST00000496810 HMGCS2P54868 508 aa23.68■■□□□ 1.38
COL20A1-208ENST00000496810 TRIM47Q96LD4 638 aa23.68■■□□□ 1.38
COL20A1-208ENST00000496810 CRBNQ96SW2 442 aa23.68■■□□□ 1.38
COL20A1-208ENST00000496810 USP17L5A8MUK1 530 aa23.67■■□□□ 1.38
COL20A1-208ENST00000496810 HLA-DOAP06340 250 aa23.67■■□□□ 1.38
COL20A1-208ENST00000496810 SDR42E1Q8WUS8 393 aa23.67■■□□□ 1.38
COL20A1-208ENST00000496810 ZBTB21Q9ULJ3 1066 aa23.67■■□□□ 1.38
COL20A1-208ENST00000496810 AGTPBP1Q9UPW5 1226 aa23.67■■□□□ 1.38
COL20A1-208ENST00000496810 ADD2P35612 726 aa23.66■■□□□ 1.38
COL20A1-208ENST00000496810 PLCD1P51178 756 aa23.66■■□□□ 1.38
COL20A1-208ENST00000496810 MTMR2Q13614 643 aa23.66■■□□□ 1.38
COL20A1-208ENST00000496810 FOXP4Q8IVH2 680 aaPredicted RBP23.66■■□□□ 1.38
COL20A1-208ENST00000496810 ARMC5Q96C12 935 aa23.66■■□□□ 1.38
COL20A1-208ENST00000496810 TRIM34Q9BYJ4 488 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms