RNA–Protein interactions for RNA: ENST00000496580.1

LRP8-211, Transcript of LDL receptor related protein 8, humanhuman

TSL 2

Gene LRP8, Length 507 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-211ENST00000496580 HMX1Q9NP08 348 aaPredicted RBP13.94□□□□□ -0.18
LRP8-211ENST00000496580 GJD2Q9UKL4 321 aa13.94□□□□□ -0.18
LRP8-211ENST00000496580 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
LRP8-211ENST00000496580 EYA2O00167 538 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 CTNND1O60716 968 aaKnown RBP13.93□□□□□ -0.18
LRP8-211ENST00000496580 PHKA1P46020 1223 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 MAP3K10Q02779 954 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 ERICH6BQ5W0A0 696 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 ATG9AQ7Z3C6 839 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
LRP8-211ENST00000496580 GUCD1Q96NT3 240 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 RCAN3Q9UKA8 241 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 OGDHLQ9ULD0 1010 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 CDH23Q9H251 3354 aa13.93□□□□□ -0.18
LRP8-211ENST00000496580 GAKO14976 1311 aa13.92□□□□□ -0.18
LRP8-211ENST00000496580 SALL1Q9NSC2 1324 aa13.92□□□□□ -0.18
LRP8-211ENST00000496580 PEX10O60683 326 aa13.92□□□□□ -0.18
LRP8-211ENST00000496580 CT47B1P0C2W7 299 aaPredicted RBP13.92□□□□□ -0.18
LRP8-211ENST00000496580 MDM2Q00987 491 aaPredicted RBP13.92□□□□□ -0.18
LRP8-211ENST00000496580 PNMA3Q9UL41 463 aa13.92□□□□□ -0.18
LRP8-211ENST00000496580 CYP2B6P20813 491 aa13.91□□□□□ -0.18
LRP8-211ENST00000496580 ATP2B3Q16720 1220 aa13.91□□□□□ -0.18
LRP8-211ENST00000496580 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
LRP8-211ENST00000496580 FAM161BQ96MY7 647 aa13.91□□□□□ -0.18
LRP8-211ENST00000496580 SIL1Q9H173 461 aa13.91□□□□□ -0.18
LRP8-211ENST00000496580 COL2A1P02458 1487 aaPredicted RBP13.91□□□□□ -0.18
LRP8-211ENST00000496580 PRKAR2AP13861 404 aaKnown RBP13.9□□□□□ -0.18
LRP8-211ENST00000496580 ADORA1P30542 326 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 BTDP43251 543 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 HMGCS2P54868 508 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 SPP2Q13103 211 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 RRP1BQ14684 758 aaKnown RBP13.9□□□□□ -0.18
LRP8-211ENST00000496580 LRRC26Q2I0M4 334 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 MAP3K21Q5TCX8 1036 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 USP44Q9H0E7 712 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 ASCC2Q9H1I8 757 aaPredicted RBP13.9□□□□□ -0.18
LRP8-211ENST00000496580 DENND2AQ9ULE3 1009 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 FRMPD3Q5JV73 1810 aa13.9□□□□□ -0.18
LRP8-211ENST00000496580 COL6A1P12109 1028 aa13.89□□□□□ -0.19
LRP8-211ENST00000496580 GCLCP48506 637 aaPredicted RBP13.89□□□□□ -0.19
LRP8-211ENST00000496580 DZIP1Q86YF9 867 aaKnown RBP13.89□□□□□ -0.19
LRP8-211ENST00000496580 MRPL50Q8N5N7 158 aaKnown RBP13.89□□□□□ -0.19
LRP8-211ENST00000496580 MAST2Q6P0Q8 1798 aa13.88□□□□□ -0.19
LRP8-211ENST00000496580 POTEB2H3BUK9 544 aa13.88□□□□□ -0.19
LRP8-211ENST00000496580 RHBDL3P58872 404 aa13.88□□□□□ -0.19
LRP8-211ENST00000496580 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
LRP8-211ENST00000496580 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.88□□□□□ -0.191e-6■■■■■ 34
LRP8-211ENST00000496580 GNL3LQ9NVN8 582 aaKnown RBP13.88□□□□□ -0.19
LRP8-211ENST00000496580 MUC3AQ02505 3323 aa13.88□□□□□ -0.19
LRP8-211ENST00000496580 MROH7-TTC4A0A0A0MT08 1334 aa13.88□□□□□ -0.19
LRP8-211ENST00000496580 SIPA1L1O43166 1804 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 CCND3P30281 292 aaPredicted RBP13.87□□□□□ -0.19
LRP8-211ENST00000496580 CACNB2Q08289 660 aaPredicted RBP13.87□□□□□ -0.19
LRP8-211ENST00000496580 RASGRF1Q13972 1273 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 CCDC102BQ68D86 513 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 OSBPL5Q9H0X9 879 aaPredicted RBP13.87□□□□□ -0.19
LRP8-211ENST00000496580 TXNRD2Q9NNW7 524 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 MORF4L1Q9UBU8 362 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 ABCF2Q9UG63 623 aa13.87□□□□□ -0.19
LRP8-211ENST00000496580 SEMA3EO15041 775 aa13.86□□□□□ -0.19
LRP8-211ENST00000496580 TBC1D12O60347 775 aa13.86□□□□□ -0.19
LRP8-211ENST00000496580 CCL14Q16627 93 aa13.86□□□□□ -0.19
LRP8-211ENST00000496580 LHX8Q68G74 356 aa13.86□□□□□ -0.19
LRP8-211ENST00000496580 FAM163AQ96GL9 167 aaPredicted RBP13.86□□□□□ -0.19
LRP8-211ENST00000496580 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
LRP8-211ENST00000496580 PA2G4Q9UQ80 394 aaKnown RBP13.86□□□□□ -0.19
LRP8-211ENST00000496580 LTBP2Q14767 1821 aa13.85□□□□□ -0.19
LRP8-211ENST00000496580 ZKSCAN1P17029 563 aaPredicted RBP13.85□□□□□ -0.19
LRP8-211ENST00000496580 MECOMQ03112 1051 aa13.85□□□□□ -0.19
LRP8-211ENST00000496580 PABPC4Q13310 644 aaKnown RBP eCLIP13.85□□□□□ -0.19
LRP8-211ENST00000496580 SH3D19Q5HYK7 790 aa13.85□□□□□ -0.19
LRP8-211ENST00000496580 FAM109BQ6ICB4 259 aaPredicted RBP13.85□□□□□ -0.19
LRP8-211ENST00000496580 ZGPATQ8N5A5 531 aaKnown RBP13.85□□□□□ -0.19
LRP8-211ENST00000496580 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
LRP8-211ENST00000496580 NUDT12Q9BQG2 462 aa13.85□□□□□ -0.19
LRP8-211ENST00000496580 GPR75-ASB3A0A0A6YYF3 556 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 USP17L5A8MUK1 530 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 CIAO1O76071 339 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 CAP2P40123 477 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 IRX3P78415 501 aaPredicted RBP13.84□□□□□ -0.19
LRP8-211ENST00000496580 MTMR2Q13614 643 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 SHROOM1Q2M3G4 852 aaPredicted RBP13.84□□□□□ -0.19
LRP8-211ENST00000496580 SOCS4Q8WXH5 440 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 PORCNQ9H237 461 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 PTPRCP08575 1304 aa13.84□□□□□ -0.19
LRP8-211ENST00000496580 XRCC5P13010 732 aaKnown RBP13.83□□□□□ -0.2
LRP8-211ENST00000496580 RRP1P56182 461 aaKnown RBP13.83□□□□□ -0.2
LRP8-211ENST00000496580 HERVK_113P62684 666 aa13.83□□□□□ -0.2
LRP8-211ENST00000496580 JAG1P78504 1218 aa13.83□□□□□ -0.2
LRP8-211ENST00000496580 Q3C1V9 767 aa13.83□□□□□ -0.2
LRP8-211ENST00000496580 POTEEQ6S8J3 1075 aa13.83□□□□□ -0.2
LRP8-211ENST00000496580 SLF2Q8IX21 1173 aa13.83□□□□□ -0.2
LRP8-211ENST00000496580 USP6NLQ92738 828 aa13.83□□□□□ -0.2
LRP8-211ENST00000496580 TIMM10P62072 90 aa13.82□□□□□ -0.2
LRP8-211ENST00000496580 ZNF697Q5TEC3 545 aa13.82□□□□□ -0.2
LRP8-211ENST00000496580 PI16Q6UXB8 463 aa13.82□□□□□ -0.2
LRP8-211ENST00000496580 ERICH6Q7L0X2 663 aa13.82□□□□□ -0.2
LRP8-211ENST00000496580 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
LRP8-211ENST00000496580 TBC1D2Q9BYX2 928 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms