RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 MCM5P33992 734 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 PPARAQ07869 468 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 RAB3GAP1Q15042 981 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 IDI2Q9BXS1 227 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 STX8Q9UNK0 236 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 CCDC88AQ3V6T2 1871 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 GAKO14976 1311 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 SGSM2O43147 1006 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 PDE4AP27815 886 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 KIF22Q14807 665 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
U2AF1-212ENST00000496462 WRNIP1Q96S55 665 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 STRBPQ96SI9 672 aaKnown RBP10.14□□□□□ -0.79
U2AF1-212ENST00000496462 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
U2AF1-212ENST00000496462 GNL2Q13823 731 aaKnown RBP10.13□□□□□ -0.79
U2AF1-212ENST00000496462 LCORLQ8N3X6 602 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 RBM8AQ9Y5S9 174 aaKnown RBP10.13□□□□□ -0.79
U2AF1-212ENST00000496462 SHTN1A0MZ66 631 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 CALM1P0DP23 149 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 CALM2P0DP24 149 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 CALM3P0DP25 149 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 SREBF2Q12772 1141 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 ALX1Q15699 326 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 NBPF9Q3BBW0 867 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 KANSL2Q9H9L4 492 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 UNCXA6NJT0 531 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 CDKL5O76039 1030 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 IRX3P78415 501 aaPredicted RBP10.13□□□□□ -0.79
U2AF1-212ENST00000496462 SDR42E1Q8WUS8 393 aa10.13□□□□□ -0.79
U2AF1-212ENST00000496462 MPHOSPH6Q99547 160 aaKnown RBP10.13□□□□□ -0.79
U2AF1-212ENST00000496462 OSBPP22059 807 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 HAND2P61296 217 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 SLC4A8Q2Y0W8 1093 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 AKNAD1Q5T1N1 836 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 TMEM179Q6ZVK1 233 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 FASTKD5Q7L8L6 764 aaKnown RBP10.12□□□□□ -0.79
U2AF1-212ENST00000496462 FAM227BQ96M60 508 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 C22orf23Q9BZE7 217 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 TMEM88BA6NKF7 163 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 USP17L5A8MUK1 530 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 ZNF157P51786 506 aaPredicted RBP10.12□□□□□ -0.79
U2AF1-212ENST00000496462 TRIM29Q14134 588 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 WTAPQ15007 396 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 TRIM22Q8IYM9 498 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 CERS5Q8N5B7 392 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 CDCA5Q96FF9 252 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 MTMR7Q9Y216 660 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 SBF1O95248 1867 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 CACNB3P54284 484 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 ANAPC15P60006 121 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 FMR1Q06787 632 aaKnown RBP eCLIP10.12□□□□□ -0.79
U2AF1-212ENST00000496462 RABEP1Q15276 862 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 JAKMIP1Q96N16 626 aaKnown RBP10.12□□□□□ -0.79
U2AF1-212ENST00000496462 NEK1Q96PY6 1258 aa10.12□□□□□ -0.79
U2AF1-212ENST00000496462 TAF1P21675 1872 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 B4DLN1 442 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 TRAF5O00463 557 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 HSPD1P10809 573 aaKnown RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 MRPL12P52815 198 aaKnown RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 SBK1Q52WX2 424 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 TMEM67Q5HYA8 995 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 IFIT1BQ5T764 474 aaKnown RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 TRPM4Q8TD43 1214 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 OSBP2Q969R2 916 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 GLIS2Q9BZE0 524 aaPredicted RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 DCP1AQ9NPI6 582 aaPredicted RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 PALD1Q9ULE6 856 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 CTNND1O60716 968 aaKnown RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 GMLQ99445 158 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 SLC12A7Q9Y666 1083 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 FLT1P17948 1338 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 DLEC1Q9Y238 1755 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 ICA1Q05084 483 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 TMEM87BQ96K49 555 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 PUS7LQ9H0K6 701 aaKnown RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 SEC63Q9UGP8 760 aaKnown RBP10.11□□□□□ -0.79
U2AF1-212ENST00000496462 MYH3P11055 1940 aa10.11□□□□□ -0.79
U2AF1-212ENST00000496462 APOBEC3HQ6NTF7 200 aaKnown RBP10.1□□□□□ -0.79
U2AF1-212ENST00000496462 SMCR8Q8TEV9 937 aaPredicted RBP10.1□□□□□ -0.79
U2AF1-212ENST00000496462 CHURC1Q8WUH1 139 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 NUP133Q8WUM0 1156 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 EHD4Q9H223 541 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 BRMS1Q9HCU9 246 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 SCAF8Q9UPN6 1271 aaKnown RBP10.1□□□□□ -0.79
U2AF1-212ENST00000496462 FER1L6Q2WGJ9 1857 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 A0A0D9SFI3 127 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 ALDH1A1P00352 501 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 INHBEP58166 350 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 CCDC129Q6ZRS4 1044 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 MIGA2Q7L4E1 593 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 FAM184AQ8NB25 1140 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 GTF3C2Q8WUA4 911 aaPredicted RBP10.1□□□□□ -0.79
U2AF1-212ENST00000496462 ZSCAN31Q96LW9 406 aaPredicted RBP10.1□□□□□ -0.79
U2AF1-212ENST00000496462 RBM27Q9P2N5 1060 aaKnown RBP10.1□□□□□ -0.79
U2AF1-212ENST00000496462 TFAP4Q01664 338 aa10.1□□□□□ -0.79
U2AF1-212ENST00000496462 C19orf81C9J6K1 198 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 CCNA1P78396 465 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 SNAPC2Q13487 334 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 GADL1Q6ZQY3 521 aa10.09□□□□□ -0.79
U2AF1-212ENST00000496462 ERO1BQ86YB8 467 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 1620.7 ms