RNA–Protein interactions for RNA: ENST00000496332.5

THBS3-208, Transcript of thrombospondin 3, humanhuman

TSL 3

Gene THBS3, Length 839 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-208ENST00000496332 EFCC1Q9HA90 598 aa14.39□□□□□ -0.11
THBS3-208ENST00000496332 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.39□□□□□ -0.11
THBS3-208ENST00000496332 SAP30BPQ9UHR5 308 aaKnown RBP14.39□□□□□ -0.11
THBS3-208ENST00000496332 HERC5Q9UII4 1024 aaKnown RBP14.39□□□□□ -0.11
THBS3-208ENST00000496332 PALD1Q9ULE6 856 aa14.39□□□□□ -0.11
THBS3-208ENST00000496332 A0A0G2JLL6 359 aaPredicted RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 SMARCA5O60264 1052 aaPredicted RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 RRP1P56182 461 aaKnown RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 CAP1Q01518 475 aa14.38□□□□□ -0.11
THBS3-208ENST00000496332 RRP1BQ14684 758 aaKnown RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 SLC9C2Q5TAH2 1124 aa14.38□□□□□ -0.11
THBS3-208ENST00000496332 GPAT2Q6NUI2 795 aa14.38□□□□□ -0.11
THBS3-208ENST00000496332 PRRT2Q7Z6L0 340 aaPredicted RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 CCDC84Q86UT8 332 aaPredicted RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 CERS3Q8IU89 383 aa14.38□□□□□ -0.11
THBS3-208ENST00000496332 BOLA2Q9H3K6 86 aa14.38□□□□□ -0.11
THBS3-208ENST00000496332 MYO5AQ9Y4I1 1855 aaKnown RBP14.38□□□□□ -0.11
THBS3-208ENST00000496332 TRIM75PA6NK02 468 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 PDE6AP16499 860 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 ATP5JP18859 108 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 CAP2P40123 477 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 USP5P45974 858 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 RGS19P49795 217 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 SOX10P56693 466 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 GADL1Q6ZQY3 521 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 FASTKD5Q7L8L6 764 aaKnown RBP14.37□□□□□ -0.11
THBS3-208ENST00000496332 FOXP4Q8IVH2 680 aaPredicted RBP14.37□□□□□ -0.11
THBS3-208ENST00000496332 EDC3Q96F86 508 aaKnown RBP14.37□□□□□ -0.11
THBS3-208ENST00000496332 TRIM34Q9BYJ4 488 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 DCTPP1Q9H773 170 aa14.37□□□□□ -0.11
THBS3-208ENST00000496332 MAGEB6P1A0A0J9YX57 407 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 HLA-DOAP06340 250 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 ARHGEF6Q15052 776 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 SLC4A8Q2Y0W8 1093 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 METTL16Q86W50 562 aaKnown RBP14.36□□□□□ -0.11
THBS3-208ENST00000496332 CRACR2BQ8N4Y2 399 aaPredicted RBP14.36□□□□□ -0.11
THBS3-208ENST00000496332 RIOK1Q9BRS2 568 aaKnown RBP14.36□□□□□ -0.11
THBS3-208ENST00000496332 PAG1Q9NWQ8 432 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 CPA4Q9UI42 421 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 PTPN22Q9Y2R2 807 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 ZNF532Q9HCE3 1301 aa14.36□□□□□ -0.11
THBS3-208ENST00000496332 CYP2C8P10632 490 aa14.35□□□□□ -0.11
THBS3-208ENST00000496332 SPP2Q13103 211 aa14.35□□□□□ -0.11
THBS3-208ENST00000496332 PARK7Q99497 189 aaKnown RBP14.35□□□□□ -0.11
THBS3-208ENST00000496332 HAUS7Q99871 368 aa14.35□□□□□ -0.11
THBS3-208ENST00000496332 DNAJC18Q9H819 358 aa14.35□□□□□ -0.11
THBS3-208ENST00000496332 PCDHB15Q9Y5E8 787 aa14.35□□□□□ -0.11
THBS3-208ENST00000496332 HTTP42858 3142 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 DOCK1Q14185 1865 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 TCRBV5S4A2TA0A5A2 114 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 USP17L5A8MUK1 530 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 JAG1P78504 1218 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 LACTBP83111 547 aaPredicted RBP14.34□□□□□ -0.11
THBS3-208ENST00000496332 MLLT1Q03111 559 aaPredicted RBP14.34□□□□□ -0.11
THBS3-208ENST00000496332 KIF22Q14807 665 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 TBC1D2Q9BYX2 928 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 ARHGAP39Q9C0H5 1083 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 ADGRA2Q96PE1 1338 aa14.34□□□□□ -0.11
THBS3-208ENST00000496332 ECM2O94769 699 aaPredicted RBP14.33□□□□□ -0.12
THBS3-208ENST00000496332 TTC6Q86TZ1 520 aa14.33□□□□□ -0.12
THBS3-208ENST00000496332 CRBNQ96SW2 442 aa14.33□□□□□ -0.12
THBS3-208ENST00000496332 CRNKL1Q9BZJ0 848 aaKnown RBP14.33□□□□□ -0.12
THBS3-208ENST00000496332 AS3MTQ9HBK9 375 aa14.33□□□□□ -0.12
THBS3-208ENST00000496332 ECHDC1Q9NTX5 307 aa14.33□□□□□ -0.12
THBS3-208ENST00000496332 SLC45A1Q9Y2W3 748 aa14.33□□□□□ -0.12
THBS3-208ENST00000496332 SIPA1L1O43166 1804 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 GDF11O95390 407 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 ASNSP08243 561 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 ADD2P35612 726 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 SHROOM1Q2M3G4 852 aaPredicted RBP14.32□□□□□ -0.12
THBS3-208ENST00000496332 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 TREML2Q5T2D2 321 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 LCORLQ8N3X6 602 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 PROCA1Q8NCQ7 364 aaPredicted RBP14.32□□□□□ -0.12
THBS3-208ENST00000496332 WDR18Q9BV38 432 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.32□□□□□ -0.12
THBS3-208ENST00000496332 SERPINB13Q9UIV8 391 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 AGTPBP1Q9UPW5 1226 aa14.32□□□□□ -0.12
THBS3-208ENST00000496332 FOCADQ5VW36 1801 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 CDK5RAP2Q96SN8 1893 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 BCRP11274 1271 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 CTGFP29279 349 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 PSMC4P43686 418 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 PLCD1P51178 756 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 HMGCS2P54868 508 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 GPATCH3Q96I76 525 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 EHD4Q9H223 541 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 ARMT1Q9H993 441 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 GINM1Q9NU53 330 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 PTCH2Q9Y6C5 1203 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 PHIPQ8WWQ0 1821 aa14.31□□□□□ -0.12
THBS3-208ENST00000496332 MBD4O95243 580 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 FMNL1O95466 1100 aaPredicted RBP14.3□□□□□ -0.12
THBS3-208ENST00000496332 GNRH1P01148 92 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 CHGBP05060 677 aa14.3□□□□□ -0.12
THBS3-208ENST00000496332 POLR3DP05423 398 aaPredicted RBP14.3□□□□□ -0.12
THBS3-208ENST00000496332 UBE3CQ15386 1083 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms