RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 KCNQ4P56696 695 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 TPM4P67936 248 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 PTPAQ15257 358 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 TMED8Q6PL24 325 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-208ENST00000496116 TPTE2Q6XPS3 522 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 FBXO33Q7Z6M2 555 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 ERCC4Q92889 916 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-208ENST00000496116 MAP3K14Q99558 947 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 FOXP1Q9H334 677 aaPredicted RBP12.79□□□□□ -0.36
CMSS1-208ENST00000496116 BCL2L12Q9HB09 334 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 PYCARDQ9ULZ3 195 aa12.79□□□□□ -0.36
CMSS1-208ENST00000496116 MYH13Q9UKX3 1938 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 TNKSO95271 1327 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 CUTAO60888 179 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 RILPL1Q5EBL4 403 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 C17orf53Q8N3J3 647 aaPredicted RBP12.78□□□□□ -0.36
CMSS1-208ENST00000496116 CRACR2BQ8N4Y2 399 aaPredicted RBP12.78□□□□□ -0.36
CMSS1-208ENST00000496116 AOPEPQ8N6M6 819 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 MROH7-TTC4A0A0A0MT08 1334 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 COL24A1Q17RW2 1714 aa12.78□□□□□ -0.36
CMSS1-208ENST00000496116 DYNC1I1O14576 645 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 GNPATO15228 680 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 NEMFO60524 1076 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 XBP1P17861 261 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 NLRP12P59046 1061 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 AKAP17AQ02040 695 aaKnown RBP12.77□□□□□ -0.36
CMSS1-208ENST00000496116 CHAF1AQ13111 956 aaPredicted RBP12.77□□□□□ -0.36
CMSS1-208ENST00000496116 NBPF11Q86T75 865 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 IQCA1Q86XH1 822 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 DIS3L2Q8IYB7 885 aaKnown RBP12.77□□□□□ -0.36
CMSS1-208ENST00000496116 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.36
CMSS1-208ENST00000496116 HPSEQ9Y251 543 aa12.77□□□□□ -0.36
CMSS1-208ENST00000496116 RTCBQ9Y3I0 505 aaKnown RBP12.77□□□□□ -0.36
CMSS1-208ENST00000496116 DUOX1Q9NRD9 1551 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 FAM237AA0A1B0GTK4 181 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 SMTNL1A8MU46 457 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
CMSS1-208ENST00000496116 HIBADHP31937 336 aaKnown RBP12.77□□□□□ -0.37
CMSS1-208ENST00000496116 SEC23AQ15436 765 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 RESP18Q5W5W9 173 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 FBXW7Q969H0 707 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 ZSCAN10Q96SZ4 725 aaPredicted RBP12.77□□□□□ -0.37
CMSS1-208ENST00000496116 NRBP1Q9UHY1 535 aa12.77□□□□□ -0.37
CMSS1-208ENST00000496116 BTAF1O14981 1849 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 A0A087WWV3 80 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 BTBD18B2RXH4 712 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 DYNLL1P63167 89 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 DPCR1Q3MIW9 517 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 IFIT1BQ5T764 474 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 SHC4Q6S5L8 630 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CATIPQ7Z7H3 387 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 KRI1Q8N9T8 703 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 NSUN4Q96CB9 384 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 RBM28Q9NW13 759 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 MYH6P13533 1939 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 BAZ2AQ9UIF9 1905 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 WTIPA6NIX2 430 aaPredicted RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 NPHP1O15259 732 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CALM1P0DP23 149 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CALM2P0DP24 149 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CALM3P0DP25 149 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 HSP90AA2PQ14568 343 aaPredicted RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 MYRIPQ8NFW9 859 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CRNKL1Q9BZJ0 848 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 SRP68Q9UHB9 627 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 HOOK1Q9UJC3 728 aaKnown RBP12.76□□□□□ -0.37
CMSS1-208ENST00000496116 CEP131Q9UPN4 1083 aa12.76□□□□□ -0.37
CMSS1-208ENST00000496116 MYH2Q9UKX2 1941 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 FGRP09769 529 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 MECOMQ03112 1051 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 FNBP4Q8N3X1 1017 aaPredicted RBP12.75□□□□□ -0.37
CMSS1-208ENST00000496116 ENAHQ8N8S7 591 aaPredicted RBP12.75□□□□□ -0.37
CMSS1-208ENST00000496116 TUBE1Q9UJT0 475 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 KCNJ14Q9UNX9 436 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 CCDC88AQ3V6T2 1871 aa12.75□□□□□ -0.37
CMSS1-208ENST00000496116 BIN1O00499 593 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 LRMPQ12912 555 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 CTR9Q6PD62 1173 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 LRRC8AQ8IWT6 810 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 ELOA2Q8IYF1 753 aaPredicted RBP12.74□□□□□ -0.37
CMSS1-208ENST00000496116 CMTR1Q8N1G2 835 aaKnown RBP12.74□□□□□ -0.37
CMSS1-208ENST00000496116 ATP8A2Q9NTI2 1148 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 FAM13BQ9NYF5 915 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 KCNH3Q9ULD8 1083 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 MAST2Q6P0Q8 1798 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 IKBKBO14920 756 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 ZBTB22O15209 634 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 IGSF3O75054 1194 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 CCDC144BQ3MJ40 725 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 SPTY2D1Q68D10 685 aaPredicted RBP12.74□□□□□ -0.37
CMSS1-208ENST00000496116 CNNM3Q8NE01 707 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 CACTINQ8WUQ7 758 aaKnown RBP12.74□□□□□ -0.37
CMSS1-208ENST00000496116 CLIC6Q96NY7 704 aa12.74□□□□□ -0.37
CMSS1-208ENST00000496116 AATFQ9NY61 560 aaKnown RBP eCLIP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms