RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 PPFIA3O75145 1194 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 FDPSP14324 419 aaKnown RBP19.19■□□□□ 0.66
HLA-A-208ENST00000496081 RXRAP19793 462 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 METAP2P50579 478 aaKnown RBP eCLIP19.19■□□□□ 0.66
HLA-A-208ENST00000496081 SCNN1DP51172 638 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 TGFB2P61812 414 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 PDE4BQ07343 736 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 SEC23AQ15436 765 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 TMTC2Q8N394 836 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 SLC12A7Q9Y666 1083 aa19.19■□□□□ 0.66
HLA-A-208ENST00000496081 ROBO3Q96MS0 1386 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 TNKSO95271 1327 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 PPIP5K2O43314 1243 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 HHIPL2Q6UWX4 724 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 MICU3Q86XE3 530 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 ZSCAN10Q96SZ4 725 aaPredicted RBP19.18■□□□□ 0.66
HLA-A-208ENST00000496081 PSMD1Q99460 953 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 MYL10Q9BUA6 226 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 SAP30BPQ9UHR5 308 aaKnown RBP19.18■□□□□ 0.66
HLA-A-208ENST00000496081 ATP6V1DQ9Y5K8 247 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 DDX60LQ5H9U9 1706 aaKnown RBP19.18■□□□□ 0.66
HLA-A-208ENST00000496081 FOCADQ5VW36 1801 aa19.18■□□□□ 0.66
HLA-A-208ENST00000496081 FLT1P17948 1338 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 ADAMTSL1Q8N6G6 1762 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 TCHHQ07283 1943 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 USP17L3A6NCW0 530 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 USP17L4A6NCW7 530 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 CPLX1O14810 134 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 PRPF40AO75400 957 aaKnown RBP19.17■□□□□ 0.66
HLA-A-208ENST00000496081 ADD1P35611 737 aaKnown RBP19.17■□□□□ 0.66
HLA-A-208ENST00000496081 SKOR2Q2VWA4 1001 aaPredicted RBP19.17■□□□□ 0.66
HLA-A-208ENST00000496081 USP17L1Q7RTZ2 530 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 AMOTL1Q8IY63 956 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 KLHL34Q8N239 644 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 PPP1R1BQ9UD71 204 aaPredicted RBP19.17■□□□□ 0.66
HLA-A-208ENST00000496081 KIF3AQ9Y496 699 aa19.17■□□□□ 0.66
HLA-A-208ENST00000496081 CDC27P30260 824 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 PLCD1P51178 756 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 ENAHQ8N8S7 591 aaPredicted RBP19.16■□□□□ 0.66
HLA-A-208ENST00000496081 DYNLL2Q96FJ2 89 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 FAM217BQ9NTX9 383 aaPredicted RBP19.16■□□□□ 0.66
HLA-A-208ENST00000496081 PIM2Q9P1W9 311 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 GOLGA8AA7E2F4 631 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 POLR3DP05423 398 aaPredicted RBP19.16■□□□□ 0.66
HLA-A-208ENST00000496081 SYNE3Q6ZMZ3 975 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 FERMT3Q86UX7 667 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 IQCA1Q86XH1 822 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 KIAA0825Q8IV33 1275 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 CCDC144CPQ8IYA2 1237 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 TEKT1Q969V4 418 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 NID2Q14112 1375 aa19.16■□□□□ 0.66
HLA-A-208ENST00000496081 MYH1P12882 1939 aa19.15■□□□□ 0.66
HLA-A-208ENST00000496081 YDJCA8MPS7 323 aa19.15■□□□□ 0.66
HLA-A-208ENST00000496081 FAM47AQ5JRC9 791 aa19.15■□□□□ 0.66
HLA-A-208ENST00000496081 MRIQ9BWK5 157 aa19.15■□□□□ 0.66
HLA-A-208ENST00000496081 GOLGB1Q14789 3259 aaKnown RBP19.15■□□□□ 0.66
HLA-A-208ENST00000496081 H3BQV1 296 aa19.14■□□□□ 0.66
HLA-A-208ENST00000496081 CRKP46108 304 aa19.14■□□□□ 0.66
HLA-A-208ENST00000496081 NTRK3Q16288 839 aa19.14■□□□□ 0.66
HLA-A-208ENST00000496081 IFFO2Q5TF58 517 aa19.14■□□□□ 0.66
HLA-A-208ENST00000496081 APOBEC3HQ6NTF7 200 aaKnown RBP19.14■□□□□ 0.66
HLA-A-208ENST00000496081 WDHD1O75717 1129 aaPredicted RBP19.14■□□□□ 0.65
HLA-A-208ENST00000496081 RCAN1P53805 252 aa19.14■□□□□ 0.65
HLA-A-208ENST00000496081 ZNF654Q8IZM8 581 aa19.14■□□□□ 0.65
HLA-A-208ENST00000496081 USP40Q9NVE5 1235 aa19.14■□□□□ 0.65
HLA-A-208ENST00000496081 ORC3Q9UBD5 711 aaPredicted RBP19.14■□□□□ 0.65
HLA-A-208ENST00000496081 CNPY2Q9Y2B0 182 aa19.14■□□□□ 0.65
HLA-A-208ENST00000496081 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 CDKL5O76039 1030 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 NT5C2P49902 561 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 HDLBPQ00341 1268 aaKnown RBP19.13■□□□□ 0.65
HLA-A-208ENST00000496081 DNM1Q05193 864 aaKnown RBP19.13■□□□□ 0.65
HLA-A-208ENST00000496081 GSE1Q14687 1217 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 IFIT1BQ5T764 474 aaKnown RBP19.13■□□□□ 0.65
HLA-A-208ENST00000496081 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 ZDHHC15Q96MV8 337 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 GDPD2Q9HCC8 539 aa19.13■□□□□ 0.65
HLA-A-208ENST00000496081 ZNF277Q9NRM2 450 aaPredicted RBP19.13■□□□□ 0.65
HLA-A-208ENST00000496081 PSME4Q14997 1843 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 BRCA1P38398 1863 aaKnown RBP19.12■□□□□ 0.65
HLA-A-208ENST00000496081 NMT2O60551 498 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 FOSBP53539 338 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 CDC42EP5Q6NZY7 148 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 CPLX2Q6PUV4 134 aaKnown RBP19.12■□□□□ 0.65
HLA-A-208ENST00000496081 SLC44A5Q8NCS7 719 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 MKNK2Q9HBH9 465 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 DDX4Q9NQI0 724 aaKnown RBP19.12■□□□□ 0.65
HLA-A-208ENST00000496081 DDX49Q9Y6V7 483 aaKnown RBP19.12■□□□□ 0.65
HLA-A-208ENST00000496081 COL4A5P29400 1685 aa19.12■□□□□ 0.65
HLA-A-208ENST00000496081 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 TFAP4Q01664 338 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 RESTQ13127 1097 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 PICALMQ13492 652 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 KLHL40Q2TBA0 621 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 DALRD3Q5D0E6 543 aaKnown RBP19.11■□□□□ 0.65
HLA-A-208ENST00000496081 C16orf86Q6ZW13 317 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 LARGE2Q8N3Y3 721 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 RTN1Q16799 776 aa19.11■□□□□ 0.65
HLA-A-208ENST00000496081 FAM173BQ6P4H8 233 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms