RNA–Protein interactions for RNA: ENST00000495934.2

C9orf78-207, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-207ENST00000495934 LOC285556D6RIA3 1793 aa12.88□□□□□ -0.35
C9orf78-207ENST00000495934 SMAD3P84022 425 aaKnown RBP12.87□□□□□ -0.35
C9orf78-207ENST00000495934 CACNB2Q08289 660 aaPredicted RBP12.87□□□□□ -0.35
C9orf78-207ENST00000495934 MAP3K12Q12852 859 aa12.87□□□□□ -0.35
C9orf78-207ENST00000495934 C9orf50Q5SZB4 431 aa12.87□□□□□ -0.35
C9orf78-207ENST00000495934 LHX8Q68G74 356 aa12.87□□□□□ -0.35
C9orf78-207ENST00000495934 CCDC84Q86UT8 332 aaPredicted RBP12.87□□□□□ -0.35
C9orf78-207ENST00000495934 ZFPM1Q8IX07 1006 aa12.87□□□□□ -0.35
C9orf78-207ENST00000495934 USP38Q8NB14 1042 aa12.87□□□□□ -0.35
C9orf78-207ENST00000495934 LRRFIP2Q9Y608 721 aaKnown RBP12.87□□□□□ -0.35
C9orf78-207ENST00000495934 MROH5Q6ZUA9 1318 aa12.87□□□□□ -0.35
C9orf78-207ENST00000495934 PIEZO1Q92508 2521 aa12.86□□□□□ -0.35
C9orf78-207ENST00000495934 ZKSCAN1P17029 563 aaPredicted RBP12.86□□□□□ -0.35
C9orf78-207ENST00000495934 CCND3P30281 292 aaPredicted RBP12.86□□□□□ -0.35
C9orf78-207ENST00000495934 DIXDC1Q155Q3 683 aa12.86□□□□□ -0.35
C9orf78-207ENST00000495934 PROCA1Q8NCQ7 364 aaPredicted RBP12.86□□□□□ -0.35
C9orf78-207ENST00000495934 SENP6Q9GZR1 1112 aaPredicted RBP12.86□□□□□ -0.35
C9orf78-207ENST00000495934 USP40Q9NVE5 1235 aa12.86□□□□□ -0.35
C9orf78-207ENST00000495934 ZBED9Q6R2W3 1325 aa12.86□□□□□ -0.35
C9orf78-207ENST00000495934 CTNND1O60716 968 aaKnown RBP12.85□□□□□ -0.35
C9orf78-207ENST00000495934 XRCC5P13010 732 aaKnown RBP12.85□□□□□ -0.35
C9orf78-207ENST00000495934 SOCS4Q8WXH5 440 aa12.85□□□□□ -0.35
C9orf78-207ENST00000495934 NUDT12Q9BQG2 462 aa12.85□□□□□ -0.35
C9orf78-207ENST00000495934 GRM8O00222 908 aa12.84□□□□□ -0.35
C9orf78-207ENST00000495934 RGS3P49796 1198 aa12.84□□□□□ -0.35
C9orf78-207ENST00000495934 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-207ENST00000495934 PABPC4Q13310 644 aaKnown RBP eCLIP12.84□□□□□ -0.35
C9orf78-207ENST00000495934 METTL24Q5JXM2 366 aa12.84□□□□□ -0.35
C9orf78-207ENST00000495934 TRMT44Q8IYL2 757 aaKnown RBP12.84□□□□□ -0.35
C9orf78-207ENST00000495934 ASCC2Q9H1I8 757 aaPredicted RBP12.84□□□□□ -0.35
C9orf78-207ENST00000495934 MYH2Q9UKX2 1941 aa12.84□□□□□ -0.35
C9orf78-207ENST00000495934 ATAD5Q96QE3 1844 aa12.83□□□□□ -0.35
C9orf78-207ENST00000495934 F6X3S4 739 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 SLURP2P0DP57 97 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 RTP1P59025 263 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 MAP3K10Q02779 954 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 PDE3AQ14432 1141 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
C9orf78-207ENST00000495934 WDR66Q8TBY9 1149 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 MORF4L1Q9UBU8 362 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 RLFQ13129 1914 aa12.83□□□□□ -0.36
C9orf78-207ENST00000495934 ENTPD3O75355 529 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 PRDX5P30044 214 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 HMGCS2P54868 508 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 CCL14Q16627 93 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 LRRC24Q50LG9 513 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 VGLL2Q8N8G2 317 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 ADAMTS19Q8TE59 1207 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 ATP11BQ9Y2G3 1177 aa12.82□□□□□ -0.36
C9orf78-207ENST00000495934 DDTLA6NHG4 134 aaPredicted RBP12.81□□□□□ -0.36
C9orf78-207ENST00000495934 PDE8BO95263 885 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 SPP2Q13103 211 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 GRIN2CQ14957 1233 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 BADQ92934 168 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 IDI2Q9BXS1 227 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 PRDM5Q9NQX1 630 aaPredicted RBP12.81□□□□□ -0.36
C9orf78-207ENST00000495934 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
C9orf78-207ENST00000495934 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
C9orf78-207ENST00000495934 PEX10O60683 326 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 LDHBP07195 334 aaKnown RBP12.8□□□□□ -0.36
C9orf78-207ENST00000495934 IFIT1P09914 478 aaKnown RBP12.8□□□□□ -0.36
C9orf78-207ENST00000495934 DSG3P32926 999 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 RGS2P41220 211 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 IRX3P78415 501 aaPredicted RBP12.8□□□□□ -0.36
C9orf78-207ENST00000495934 ZNF280CQ8ND82 737 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 ATXN2LQ8WWM7 1075 aaKnown RBP12.8□□□□□ -0.36
C9orf78-207ENST00000495934 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 USP6NLQ92738 828 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 SUCLG2Q96I99 432 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 UHRF1Q96T88 793 aaPredicted RBP12.8□□□□□ -0.36
C9orf78-207ENST00000495934 APBA2Q99767 749 aa12.8□□□□□ -0.36
C9orf78-207ENST00000495934 DNM1LO00429 736 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 MAPK4P31152 587 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 PUM3Q15397 648 aaKnown RBP12.79□□□□□ -0.36
C9orf78-207ENST00000495934 MRPL50Q8N5N7 158 aaKnown RBP12.79□□□□□ -0.36
C9orf78-207ENST00000495934 GPRC5AQ8NFJ5 357 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 RNPC3Q96LT9 517 aaKnown RBP12.79□□□□□ -0.36
C9orf78-207ENST00000495934 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 TXNRD2Q9NNW7 524 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 THEGQ9P2T0 379 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 CHD9Q3L8U1 2897 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 SYNGAP1Q96PV0 1343 aa12.79□□□□□ -0.36
C9orf78-207ENST00000495934 TCF20Q9UGU0 1960 aaKnown RBP12.78□□□□□ -0.36
C9orf78-207ENST00000495934 FGFR2P21802 821 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 MORN1Q5T089 497 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 GPR142Q7Z601 462 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 CCAR1Q8IX12 1150 aaKnown RBP12.78□□□□□ -0.36
C9orf78-207ENST00000495934 PPM1EQ8WY54 764 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 LPAR1Q92633 364 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 KAZALD1Q96I82 304 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 TBC1D2Q9BYX2 928 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
C9orf78-207ENST00000495934 PDLIM7Q9NR12 457 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 DDX20Q9UHI6 824 aaKnown RBP12.78□□□□□ -0.36
C9orf78-207ENST00000495934 REV3LO60673 3130 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 MUC6Q6W4X9 2439 aa12.78□□□□□ -0.36
C9orf78-207ENST00000495934 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms