RNA–Protein interactions for RNA: ENST00000495817.1

CCDC39-207, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 1,047 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-207ENST00000495817 TMEM74Q96NL1 305 aa9.24□□□□□ -0.93
CCDC39-207ENST00000495817 OSBPL1AQ9BXW6 950 aa9.24□□□□□ -0.93
CCDC39-207ENST00000495817 SSU72Q9NP77 194 aaKnown RBP9.24□□□□□ -0.93
CCDC39-207ENST00000495817 PCDHB5Q9Y5E4 795 aa9.24□□□□□ -0.93
CCDC39-207ENST00000495817 PRR19A6NJB7 356 aa9.23□□□□□ -0.93
CCDC39-207ENST00000495817 DYNC1LI2O43237 492 aaPredicted RBP9.23□□□□□ -0.93
CCDC39-207ENST00000495817 TGFB1P01137 390 aa9.23□□□□□ -0.93
CCDC39-207ENST00000495817 C12orf40Q86WS4 652 aa9.23□□□□□ -0.93
CCDC39-207ENST00000495817 PIM2Q9P1W9 311 aa9.23□□□□□ -0.93
CCDC39-207ENST00000495817 TLR6Q9Y2C9 796 aa9.23□□□□□ -0.93
CCDC39-207ENST00000495817 SCO2A0A1W2PP80 73 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 COBLO75128 1261 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 ADMP35318 185 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 CD97P48960 835 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 RPL6Q02878 288 aaKnown RBP9.22□□□□□ -0.93
CCDC39-207ENST00000495817 INPP5AQ14642 412 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 DUSP27Q5VZP5 1158 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.22□□□□□ -0.93
CCDC39-207ENST00000495817 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCDC39-207ENST00000495817 SREK1Q8WXA9 508 aaKnown RBP9.22□□□□□ -0.93
CCDC39-207ENST00000495817 CCSER2Q9H7U1 834 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 USP35Q9P2H5 1018 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 LEMD3Q9Y2U8 911 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 CSADQ9Y600 493 aa9.22□□□□□ -0.93
CCDC39-207ENST00000495817 PRAMEF27A3QJZ7 478 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 GBP2P32456 591 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-207ENST00000495817 CAMK2GQ13555 558 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-207ENST00000495817 CYP27C1Q4G0S4 372 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 ARTNQ5T4W7 220 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 OGFOD3Q6PK18 319 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 CDC37L1Q7L3B6 337 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 ZNF654Q8IZM8 581 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 ZNF507Q8TCN5 953 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 WNT10AQ9GZT5 417 aa9.21□□□□□ -0.94
CCDC39-207ENST00000495817 DDX41Q9UJV9 622 aaKnown RBP9.21□□□□□ -0.94
CCDC39-207ENST00000495817 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.21□□□□□ -0.94
CCDC39-207ENST00000495817 KIAA1324LA8MWY0 1029 aaPredicted RBP9.2□□□□□ -0.94
CCDC39-207ENST00000495817 GFRA2O00451 464 aa9.2□□□□□ -0.94
CCDC39-207ENST00000495817 FOSL1P15407 271 aa9.2□□□□□ -0.94
CCDC39-207ENST00000495817 DRC1Q96MC2 740 aa9.2□□□□□ -0.94
CCDC39-207ENST00000495817 PSMG3-AS1Q96PY0 264 aa9.2□□□□□ -0.94
CCDC39-207ENST00000495817 GGT7Q9UJ14 662 aa9.2□□□□□ -0.94
CCDC39-207ENST00000495817 FAM170BA6NMN3 283 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 BPNT1O95861 308 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 PF4P02776 101 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 CAP2P40123 477 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 CDK5R2Q13319 367 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 SF3A1Q15459 793 aaKnown RBP9.19□□□□□ -0.94
CCDC39-207ENST00000495817 USP48Q86UV5 1035 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 SLC43A3Q8NBI5 491 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 GATAD2BQ8WXI9 593 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 KBTBD4Q9NVX7 518 aa9.19□□□□□ -0.94
CCDC39-207ENST00000495817 CILPO75339 1184 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 ETF1P62495 437 aaKnown RBP9.18□□□□□ -0.94
CCDC39-207ENST00000495817 SNAP47Q5SQN1 464 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 ZNF765Q7L2R6 523 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 Q8N3U1 123 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 TINF2Q9BSI4 451 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 LGR6Q9HBX8 967 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 ZFP64Q9NPA5 681 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 KCNQ5Q9NR82 932 aa9.18□□□□□ -0.94
CCDC39-207ENST00000495817 FAM221AA4D161 298 aa9.17□□□□□ -0.94
CCDC39-207ENST00000495817 LRIG2O94898 1065 aa9.17□□□□□ -0.94
CCDC39-207ENST00000495817 FAM87AP0C7U9 286 aa9.17□□□□□ -0.94
CCDC39-207ENST00000495817 PDE4BQ07343 736 aa9.17□□□□□ -0.94
CCDC39-207ENST00000495817 GNL2Q13823 731 aaKnown RBP9.17□□□□□ -0.94
CCDC39-207ENST00000495817 JARID2Q92833 1246 aaPredicted RBP9.17□□□□□ -0.94
CCDC39-207ENST00000495817 CYP26A1O43174 497 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 SPINK2P20155 84 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 RACK1P63244 317 aaKnown RBP9.16□□□□□ -0.94
CCDC39-207ENST00000495817 ZNF394Q53GI3 561 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 BNC2Q6ZN30 1099 aaPredicted RBP9.16□□□□□ -0.94
CCDC39-207ENST00000495817 ARMCX6Q7L4S7 300 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 HID1Q8IV36 788 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 DUSP23Q9BVJ7 150 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 ACBD3Q9H3P7 528 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 ADAM30Q9UKF2 790 aa9.16□□□□□ -0.94
CCDC39-207ENST00000495817 F6X3S4 739 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 GRK4P32298 578 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 CDK8P49336 464 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 MPP2Q14168 576 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 DTX1Q86Y01 620 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 SHISA5Q8N114 240 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 GOLM1Q8NBJ4 401 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 CAPN10Q9HC96 672 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 PRDM10Q9NQV6 1147 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 PCMTD2Q9NV79 361 aa9.15□□□□□ -0.94
CCDC39-207ENST00000495817 SUPT16HQ9Y5B9 1047 aaKnown RBP9.15□□□□□ -0.94
CCDC39-207ENST00000495817 ROBO2Q9HCK4 1378 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 HYAL3O43820 417 aaPredicted RBP9.14□□□□□ -0.95
CCDC39-207ENST00000495817 F13A1P00488 732 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 GARTP22102 1010 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 SSTR4P31391 388 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 EIF4A3P38919 411 aaKnown RBP9.14□□□□□ -0.95
CCDC39-207ENST00000495817 MSMPQ1L6U9 139 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 FAM196AQ6ZSG2 479 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 LRRC3Q9BY71 257 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 MKNK2Q9HBH9 465 aa9.14□□□□□ -0.95
CCDC39-207ENST00000495817 COPRSQ9NQ92 184 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms