RNA–Protein interactions for RNA: ENST00000495643.1

DCTN1-223, Transcript of dynactin subunit 1, human

TSL 3

Gene DCTN1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCTN1-223	ENST00000495643	RIOK1	Q9BRS2	568 aa	Known RBP	13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	BOLA2	Q9H3K6	86 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	ZCCHC17	Q9NP64	241 aa	Known RBP	13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	PAG1	Q9NWQ8	432 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	PI4KB	Q9UBF8	816 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	HERC5	Q9UII4	1024 aa	Known RBP	13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	ZHX2	Q9Y6X8	837 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	MYH7	P12883	1935 aa		13.31	□□□□□ -0.28
DCTN1-223	ENST00000495643	TCRBV5S4A2T	A0A5A2	114 aa		13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	CXCL11	O14625	94 aa		13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	RRP1B	Q14684	758 aa	Known RBP	13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	TAF1C	Q15572	869 aa	Predicted RBP	13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	SLC9C2	Q5TAH2	1124 aa		13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	PICK1	Q9NRD5	415 aa		13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	PALD1	Q9ULE6	856 aa		13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	AFG3L2	Q9Y4W6	797 aa		13.3	□□□□□ -0.28
DCTN1-223	ENST00000495643	CAP2	P40123	477 aa		13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	PKN2	Q16513	984 aa	Known RBP	13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	ANKRD23	Q86SG2	305 aa		13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	DNAJC18	Q9H819	358 aa		13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	ZFYVE28	Q9HCC9	887 aa		13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	SAP30BP	Q9UHR5	308 aa	Known RBP	13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	DDX60L	Q5H9U9	1706 aa	Known RBP	13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	ZNF532	Q9HCE3	1301 aa		13.29	□□□□□ -0.28
DCTN1-223	ENST00000495643	HTT	P42858	3142 aa		13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643		A0A0G2JLL6	359 aa	Predicted RBP	13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	MAGEB6P1	A0A0J9YX57	407 aa		13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	CAP1	Q01518	475 aa		13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	SP3	Q02447	781 aa		13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	GPAT2	Q6NUI2	795 aa		13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	ECHDC1	Q9NTX5	307 aa		13.28	□□□□□ -0.28
DCTN1-223	ENST00000495643	NAV1	Q8NEY1	1877 aa		13.27	□□□□□ -0.28
DCTN1-223	ENST00000495643	CCDC85C	A6NKD9	419 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	PDHX	O00330	501 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	TLR2	O60603	784 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	ADD2	P35612	726 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	USP5	P45974	858 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	JAG1	P78504	1218 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	CCDC84	Q86UT8	332 aa	Predicted RBP	13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	CD99L2	Q8TCZ2	262 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	ERO1A	Q96HE7	468 aa		13.27	□□□□□ -0.29
DCTN1-223	ENST00000495643	LOC285556	D6RIA3	1793 aa		13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	SLC4A8	Q2Y0W8	1093 aa		13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	SLFNL1	Q499Z3	407 aa		13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	FASTKD5	Q7L8L6	764 aa	Known RBP	13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	OTOP1	Q7RTM1	612 aa		13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	ADGRA2	Q96PE1	1338 aa		13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	TBC1D2	Q9BYX2	928 aa		13.26	□□□□□ -0.29
DCTN1-223	ENST00000495643	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.26	□□□□□ -0.29	3e-7	■■■■■ 42.3
DCTN1-223	ENST00000495643	ZSWIM8	A7E2V4	1837 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	TRIM75P	A6NK02	468 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	USP17L5	A8MUK1	530 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	CHGB	P05060	677 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	HLA-DOA	P06340	250 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	AAMP	Q13685	434 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	UBE3C	Q15386	1083 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	C17orf99	Q6UX52	265 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	LCORL	Q8N3X6	602 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	CRNKL1	Q9BZJ0	848 aa	Known RBP	13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	EHD4	Q9H223	541 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	HPS5	Q9UPZ3	1129 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	TRIM17	Q9Y577	477 aa		13.25	□□□□□ -0.29
DCTN1-223	ENST00000495643	ASNS	P08243	561 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	SPP2	Q13103	211 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	HDAC1	Q13547	482 aa	Predicted RBP	13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	SHROOM1	Q2M3G4	852 aa	Predicted RBP	13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	TSHZ3	Q63HK5	1081 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	TATDN1	Q6P1N9	297 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	GADL1	Q6ZQY3	521 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	ZNF280C	Q8ND82	737 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	GPATCH3	Q96I76	525 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	WDR18	Q9BV38	432 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	ARMT1	Q9H993	441 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	DCP1A	Q9NPI6	582 aa	Predicted RBP	13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	GINM1	Q9NU53	330 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	SERPINB13	Q9UIV8	391 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	SLC45A1	Q9Y2W3	748 aa		13.24	□□□□□ -0.29
DCTN1-223	ENST00000495643	BAZ2A	Q9UIF9	1905 aa	Known RBP	13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	TTC41P	Q6P2S7	1318 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	SALL3	Q9BXA9	1300 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	MBD4	O95243	580 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	CYP2C8	P10632	490 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	PLCD1	P51178	756 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	SH3D19	Q5HYK7	790 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	ZSCAN25	Q6NSZ9	544 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	TTC6	Q86TZ1	520 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	KBTBD3	Q8NAB2	608 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	PROCA1	Q8NCQ7	364 aa	Predicted RBP	13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	SDR42E1	Q8WUS8	393 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	TRIM34	Q9BYJ4	488 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	EFCC1	Q9HA90	598 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	CPA4	Q9UI42	421 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	PTPN22	Q9Y2R2	807 aa		13.23	□□□□□ -0.29
DCTN1-223	ENST00000495643	PRKAB2	O43741	272 aa		13.22	□□□□□ -0.29

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