RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-215ENST00000495341 MAPKAPK5Q8IW41 473 aa20.21■□□□□ 0.83
LMNA-215ENST00000495341 TGFBRAP1Q8WUH2 860 aa20.21■□□□□ 0.83
LMNA-215ENST00000495341 MYCP01106 439 aaPredicted RBP20.2■□□□□ 0.82
LMNA-215ENST00000495341 CYP7A1P22680 504 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 PRMT2P55345 433 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 SH3TC2Q8TF17 1288 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 TRIM47Q96LD4 638 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 DHX36Q9H2U1 1008 aaKnown RBP20.2■□□□□ 0.82
LMNA-215ENST00000495341 HERC5Q9UII4 1024 aaKnown RBP20.2■□□□□ 0.82
LMNA-215ENST00000495341 DDX19BQ9UMR2 479 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 COG6Q9Y2V7 657 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 FLT1P17948 1338 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 PDE4DIPQ5VU43 2346 aa20.2■□□□□ 0.82
LMNA-215ENST00000495341 APBB1O00213 710 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 IGSF3O75054 1194 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 HOXD10P28358 340 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 CTGFP29279 349 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 PPP4CP60510 307 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 SMCR8Q8TEV9 937 aaPredicted RBP20.19■□□□□ 0.82
LMNA-215ENST00000495341 IL1RAPL2Q9NP60 686 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 PI4KBQ9UBF8 816 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 NDUFB9Q9Y6M9 179 aa20.19■□□□□ 0.82
LMNA-215ENST00000495341 OSBPP22059 807 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 CAP2P40123 477 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 DYNLL1P63167 89 aaKnown RBP20.18■□□□□ 0.82
LMNA-215ENST00000495341 PRPF38BQ5VTL8 546 aaKnown RBP20.18■□□□□ 0.82
LMNA-215ENST00000495341 CRACR2BQ8N4Y2 399 aaPredicted RBP20.18■□□□□ 0.82
LMNA-215ENST00000495341 RHPN1Q8TCX5 695 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 BCL11AQ9H165 835 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 SRRDQ9UH36 339 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 RCAN3Q9UKA8 241 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 AGTPBP1Q9UPW5 1226 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 SLC45A1Q9Y2W3 748 aa20.18■□□□□ 0.82
LMNA-215ENST00000495341 BRCA2P51587 3418 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 HMMRO75330 724 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 BCRP11274 1271 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 EN2P19622 333 aaPredicted RBP20.17■□□□□ 0.82
LMNA-215ENST00000495341 FCGRTP55899 365 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 SPP2Q13103 211 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 MAGEB6Q8N7X4 407 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 MIGA1Q8NAN2 632 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 RAET1EQ8TD07 263 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 SAP30BPQ9UHR5 308 aaKnown RBP20.17■□□□□ 0.82
LMNA-215ENST00000495341 PALD1Q9ULE6 856 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 MYPNQ86TC9 1320 aa20.17■□□□□ 0.82
LMNA-215ENST00000495341 USP17L5A8MUK1 530 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 HLA-DOAP06340 250 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 MAP3K12Q12852 859 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 RRP1BQ14684 758 aaKnown RBP20.16■□□□□ 0.82
LMNA-215ENST00000495341 RPAP2Q8IXW5 612 aaPredicted RBP20.16■□□□□ 0.82
LMNA-215ENST00000495341 ZNF280CQ8ND82 737 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 TBC1D2Q9BYX2 928 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 ANTXR1Q9H6X2 564 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 AS3MTQ9HBK9 375 aa20.16■□□□□ 0.82
LMNA-215ENST00000495341 HMGCS2P54868 508 aa20.15■□□□□ 0.82
LMNA-215ENST00000495341 TREML2Q5T2D2 321 aa20.15■□□□□ 0.82
LMNA-215ENST00000495341 CLASRPQ8N2M8 674 aaKnown RBP20.15■□□□□ 0.82
LMNA-215ENST00000495341 PROCA1Q8NCQ7 364 aaPredicted RBP20.15■□□□□ 0.82
LMNA-215ENST00000495341 KIF1BPQ96EK5 621 aa20.15■□□□□ 0.82
LMNA-215ENST00000495341 PNMA3Q9UL41 463 aa20.15■□□□□ 0.82
LMNA-215ENST00000495341 PHIPQ8WWQ0 1821 aa20.14■□□□□ 0.81
LMNA-215ENST00000495341 USP5P45974 858 aa20.14■□□□□ 0.81
LMNA-215ENST00000495341 CERS3Q8IU89 383 aa20.14■□□□□ 0.81
LMNA-215ENST00000495341 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.81
LMNA-215ENST00000495341 ZBTB40Q9NUA8 1239 aa20.14■□□□□ 0.81
LMNA-215ENST00000495341 RBBP6Q7Z6E9 1792 aaKnown RBP20.13■□□□□ 0.81
LMNA-215ENST00000495341 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
LMNA-215ENST00000495341 GRK4P32298 578 aa20.13■□□□□ 0.81
LMNA-215ENST00000495341 PRKCZQ05513 592 aa20.13■□□□□ 0.81
LMNA-215ENST00000495341 FOXP4Q8IVH2 680 aaPredicted RBP20.13■□□□□ 0.81
LMNA-215ENST00000495341 DNAJC18Q9H819 358 aa20.13■□□□□ 0.81
LMNA-215ENST00000495341 BIN2Q9UBW5 565 aaPredicted RBP20.13■□□□□ 0.81
LMNA-215ENST00000495341 MKI67P46013 3256 aaKnown RBP20.13■□□□□ 0.81
LMNA-215ENST00000495341 PTPRFP10586 1907 aa20.12■□□□□ 0.81
LMNA-215ENST00000495341 MYO5AQ9Y4I1 1855 aaKnown RBP20.12■□□□□ 0.81
LMNA-215ENST00000495341 GDF11O95390 407 aa20.12■□□□□ 0.81
LMNA-215ENST00000495341 ASNSP08243 561 aa20.12■□□□□ 0.81
LMNA-215ENST00000495341 PABPC4Q13310 644 aaKnown RBP eCLIP20.12■□□□□ 0.81
LMNA-215ENST00000495341 TTF1Q15361 905 aaPredicted RBP20.12■□□□□ 0.81
LMNA-215ENST00000495341 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
LMNA-215ENST00000495341 ANKRD13CQ8N6S4 541 aa20.12■□□□□ 0.81
LMNA-215ENST00000495341 SIPA1L1O43166 1804 aa20.11■□□□□ 0.81
LMNA-215ENST00000495341 ATAD5Q96QE3 1844 aa20.11■□□□□ 0.81
LMNA-215ENST00000495341 KIAA0100Q14667 2235 aaKnown RBP20.11■□□□□ 0.81
LMNA-215ENST00000495341 TNPO2O14787 897 aaKnown RBP20.11■□□□□ 0.81
LMNA-215ENST00000495341 MTMR2Q13614 643 aa20.11■□□□□ 0.81
LMNA-215ENST00000495341 DNAJC2Q99543 621 aaKnown RBP20.11■□□□□ 0.81
LMNA-215ENST00000495341 GABRQQ9UN88 632 aa20.11■□□□□ 0.81
LMNA-215ENST00000495341 RAB11FIP3O75154 756 aa20.1■□□□□ 0.81
LMNA-215ENST00000495341 MTFR1Q15390 333 aa20.1■□□□□ 0.81
LMNA-215ENST00000495341 SHROOM1Q2M3G4 852 aaPredicted RBP20.1■□□□□ 0.81
LMNA-215ENST00000495341 SH3D19Q5HYK7 790 aa20.1■□□□□ 0.81
LMNA-215ENST00000495341 TMED8Q6PL24 325 aaPredicted RBP20.1■□□□□ 0.81
LMNA-215ENST00000495341 METTL16Q86W50 562 aaKnown RBP20.1■□□□□ 0.81
LMNA-215ENST00000495341 TMOD4Q9NZQ9 345 aa20.1■□□□□ 0.81
LMNA-215ENST00000495341 FOCADQ5VW36 1801 aa20.09■□□□□ 0.81
LMNA-215ENST00000495341 LOC285556D6RIA3 1793 aa20.09■□□□□ 0.81
LMNA-215ENST00000495341 UBXN2AP68543 259 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms