RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-240ENST00000495293 TTC37Q6PGP7 1564 aa6.89□□□□□ -1.31
RBM39-240ENST00000495293 DENND4BO75064 1496 aaPredicted RBP6.88□□□□□ -1.31
RBM39-240ENST00000495293 CCNB3Q8WWL7 1395 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 RAPGEF3O95398 923 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 PTPN12Q05209 780 aaKnown RBP6.88□□□□□ -1.31
RBM39-240ENST00000495293 CDK5R2Q13319 367 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 SPRED2Q7Z698 418 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 PDZD3Q86UT5 571 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 TP53INP2Q8IXH6 220 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 FLCNQ8NFG4 579 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 CRIM1Q9NZV1 1036 aa6.88□□□□□ -1.31
RBM39-240ENST00000495293 ADGRL1O94910 1474 aa6.87□□□□□ -1.31
RBM39-240ENST00000495293 ITGB5P18084 799 aa6.87□□□□□ -1.31
RBM39-240ENST00000495293 B4GALNT3Q6L9W6 998 aa6.87□□□□□ -1.31
RBM39-240ENST00000495293 FBXL18Q96ME1 805 aa6.87□□□□□ -1.31
RBM39-240ENST00000495293 FANCD2OSQ96PS1 177 aa6.87□□□□□ -1.31
RBM39-240ENST00000495293 CFDP1Q9UEE9 299 aaPredicted RBP6.87□□□□□ -1.31
RBM39-240ENST00000495293 EHBP1L1Q8N3D4 1523 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 SCAPERQ9BY12 1400 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 SYNGAP1Q96PV0 1343 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 PDE3BQ13370 1112 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 OGFOD2Q6N063 350 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 OGFOD3Q6PK18 319 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 FAM181AQ8N9Y4 354 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 BCL7CQ8WUZ0 217 aaPredicted RBP6.86□□□□□ -1.31
RBM39-240ENST00000495293 CSRNP1Q96S65 589 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 DNAJC25Q9H1X3 360 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 DISC1Q9NRI5 854 aa6.86□□□□□ -1.31
RBM39-240ENST00000495293 SUPT6HQ7KZ85 1726 aaKnown RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 ARID4BQ4LE39 1312 aaPredicted RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 GADD45BO75293 160 aaPredicted RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 LEFTY1O75610 366 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 NEFMP07197 916 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 CD96P40200 585 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 BNIP3Q12983 259 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 AP3B2Q13367 1082 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 RPS26P11Q5JNZ5 115 aaPredicted RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 DUSP27Q5VZP5 1158 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 PLD6Q8N2A8 252 aaKnown RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 ALKBH8Q96BT7 664 aaKnown RBP6.85□□□□□ -1.31
RBM39-240ENST00000495293 CITED4Q96RK1 184 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 RBCK1Q9BYM8 510 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 TIAM1Q13009 1591 aa6.85□□□□□ -1.31
RBM39-240ENST00000495293 PREX2Q70Z35 1606 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 PAPLNO95428 1278 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 GSTP1P09211 210 aaKnown RBP6.84□□□□□ -1.31
RBM39-240ENST00000495293 FAM87AP0C7U9 286 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 FCGRTP55899 365 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 KIF4BQ2VIQ3 1234 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 HP1BP3Q5SSJ5 553 aaPredicted RBP6.84□□□□□ -1.31
RBM39-240ENST00000495293 MPRIPQ6WCQ1 1025 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 TMC7Q7Z402 723 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 MAP3K1Q13233 1512 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 CDC42BPBQ9Y5S2 1711 aa6.84□□□□□ -1.31
RBM39-240ENST00000495293 GPATCH8Q9UKJ3 1502 aaKnown RBP6.83□□□□□ -1.32
RBM39-240ENST00000495293 NEFLP07196 543 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 HCLS1P14317 486 aaPredicted RBP6.83□□□□□ -1.32
RBM39-240ENST00000495293 ID3Q02535 119 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 TTLL4Q14679 1199 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 AFAP1Q8N556 730 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 TMC1Q8TDI8 760 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 CDC42BPAQ5VT25 1732 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 ZNF518AQ6AHZ1 1483 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 LRRC9Q6ZRR7 1453 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 MAGI2Q86UL8 1455 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 PLEKHH2Q8IVE3 1493 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 ITSN2Q9NZM3 1697 aa6.83□□□□□ -1.32
RBM39-240ENST00000495293 NCOA2Q15596 1464 aa6.82□□□□□ -1.32
RBM39-240ENST00000495293 HNRNPMP52272 730 aaKnown RBP eCLIP6.82□□□□□ -1.32
RBM39-240ENST00000495293 JAG1P78504 1218 aa6.82□□□□□ -1.32
RBM39-240ENST00000495293 CYP27A1Q02318 531 aa6.82□□□□□ -1.32
RBM39-240ENST00000495293 TRIM26Q12899 539 aaPredicted RBP6.82□□□□□ -1.32
RBM39-240ENST00000495293 DDX54Q8TDD1 881 aaKnown RBP6.82□□□□□ -1.32
RBM39-240ENST00000495293 ZFYVE1Q9HBF4 777 aa6.82□□□□□ -1.32
RBM39-240ENST00000495293 ADAMTS6Q9UKP5 1117 aa6.82□□□□□ -1.32
RBM39-240ENST00000495293 POGZQ7Z3K3 1410 aa6.82□□□□□ -1.32
RBM39-240ENST00000495293 RICTORQ6R327 1708 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 ZFYVE16Q7Z3T8 1539 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 SOWAHDA6NJG2 315 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 RBAK-RBAKDNI3L0D1 243 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 TSPY4P0CV99 314 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 TSPY10P0CW01 314 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 CD8BP10966 210 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 ZNF792Q3KQV3 632 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 UBE3DQ7Z6J8 389 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 SMYD4Q8IYR2 804 aaPredicted RBP6.81□□□□□ -1.32
RBM39-240ENST00000495293 DMRTB1Q96MA1 342 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 BCO2Q9BYV7 579 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 TRAK1Q9UPV9 953 aa6.81□□□□□ -1.32
RBM39-240ENST00000495293 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
RBM39-240ENST00000495293 SPAG9O60271 1321 aaKnown RBP6.8□□□□□ -1.32
RBM39-240ENST00000495293 NTF4P34130 210 aa6.8□□□□□ -1.32
RBM39-240ENST00000495293 DSC3Q14574 896 aa6.8□□□□□ -1.32
RBM39-240ENST00000495293 NXPE4Q6UWF7 544 aa6.8□□□□□ -1.32
RBM39-240ENST00000495293 DTHD1Q6ZMT9 781 aa6.8□□□□□ -1.32
RBM39-240ENST00000495293 SULF2Q8IWU5 870 aa6.8□□□□□ -1.32
RBM39-240ENST00000495293 C3orf58Q8NDZ4 430 aa6.8□□□□□ -1.32
RBM39-240ENST00000495293 CCER1Q8TC90 406 aaPredicted RBP6.8□□□□□ -1.32
RBM39-240ENST00000495293 ISL2Q96A47 359 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms