RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 ZNF532Q9HCE3 1301 aa19.16■□□□□ 0.66
CBX4-204ENST00000495122 LARGE1O95461 756 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 MBD3O95983 291 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 FGAP02671 866 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 CHGBP05060 677 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 GJB2P29033 226 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 EVCP57679 992 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 CSPP1Q1MSJ5 1256 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 MCTP1Q6DN14 999 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 Q6ZUG5 572 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 STOX1Q6ZVD7 989 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 GTF3C6Q969F1 213 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 ZNF274Q96GC6 653 aaPredicted RBP19.15■□□□□ 0.66
CBX4-204ENST00000495122 TAF6LQ9Y6J9 622 aa19.15■□□□□ 0.66
CBX4-204ENST00000495122 ZNF213O14771 459 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 FOXP2O15409 715 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 PFKFB2O60825 505 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 SYT1P21579 422 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 FKBP1AP62942 108 aaKnown RBP19.14■□□□□ 0.65
CBX4-204ENST00000495122 FGD1P98174 961 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 RASAL3Q86YV0 1011 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 TMEM87AQ8NBN3 555 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 NCOA7Q8NI08 942 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 LMBRD1Q9NUN5 540 aa19.14■□□□□ 0.65
CBX4-204ENST00000495122 BCAMP50895 628 aa19.13■□□□□ 0.65
CBX4-204ENST00000495122 FBXO33Q7Z6M2 555 aa19.13■□□□□ 0.65
CBX4-204ENST00000495122 APOBEC3FQ8IUX4 373 aaKnown RBP19.13■□□□□ 0.65
CBX4-204ENST00000495122 RGS22Q8NE09 1264 aa19.13■□□□□ 0.65
CBX4-204ENST00000495122 STRBPQ96SI9 672 aaKnown RBP19.13■□□□□ 0.65
CBX4-204ENST00000495122 MAST2Q6P0Q8 1798 aa19.13■□□□□ 0.65
CBX4-204ENST00000495122 MYO5AQ9Y4I1 1855 aaKnown RBP19.12■□□□□ 0.65
CBX4-204ENST00000495122 SSC5DA1L4H1 1573 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 PATL2C9JE40 543 aaKnown RBP19.12■□□□□ 0.65
CBX4-204ENST00000495122 MCM5P33992 734 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 HMGN5P82970 282 aaKnown RBP19.12■□□□□ 0.65
CBX4-204ENST00000495122 KIF23Q02241 960 aaPredicted RBP19.12■□□□□ 0.65
CBX4-204ENST00000495122 ST3GAL1Q11201 340 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 TRDNQ13061 729 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 PRAMEF18Q5VWM3 479 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 MOB2Q70IA6 237 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 RALYLQ86SE5 291 aaKnown RBP19.12■□□□□ 0.65
CBX4-204ENST00000495122 MTMR14Q8NCE2 650 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 NACAP1Q9BZK3 213 aa19.12■□□□□ 0.65
CBX4-204ENST00000495122 FAM205AQ6ZU69 1335 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 F13A1P00488 732 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 SLFNL1Q499Z3 407 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 VPS37DQ86XT2 251 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 MTA3Q9BTC8 594 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 SAGE1Q9NXZ1 904 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 DDX49Q9Y6V7 483 aaKnown RBP19.11■□□□□ 0.65
CBX4-204ENST00000495122 MYH2Q9UKX2 1941 aa19.11■□□□□ 0.65
CBX4-204ENST00000495122 DLGAP5Q15398 846 aa19.1■□□□□ 0.65
CBX4-204ENST00000495122 MB21D2Q8IYB1 491 aaPredicted RBP19.1■□□□□ 0.65
CBX4-204ENST00000495122 MAGEB6Q8N7X4 407 aa19.1■□□□□ 0.65
CBX4-204ENST00000495122 TDRD7Q8NHU6 1098 aaKnown RBP19.1■□□□□ 0.65
CBX4-204ENST00000495122 BRF1Q92994 677 aa19.1■□□□□ 0.65
CBX4-204ENST00000495122 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
CBX4-204ENST00000495122 LRP2BPQ9P2M1 347 aa19.1■□□□□ 0.65
CBX4-204ENST00000495122 JAG2Q9Y219 1238 aa19.1■□□□□ 0.65
CBX4-204ENST00000495122 PCDHAC2Q9Y5I4 1007 aa19.1■□□□□ 0.65
CBX4-204ENST00000495122 DHX16O60231 1041 aaKnown RBP19.09■□□□□ 0.65
CBX4-204ENST00000495122 GYG1P46976 350 aa19.09■□□□□ 0.65
CBX4-204ENST00000495122 SMARCC2Q8TAQ2 1214 aa19.09■□□□□ 0.65
CBX4-204ENST00000495122 ABHD8Q96I13 439 aa19.09■□□□□ 0.65
CBX4-204ENST00000495122 CNNM2Q9H8M5 875 aa19.09■□□□□ 0.65
CBX4-204ENST00000495122 MTMR6Q9Y217 621 aa19.09■□□□□ 0.65
CBX4-204ENST00000495122 FSD2A1L4K1 749 aa19.08■□□□□ 0.64
CBX4-204ENST00000495122 F8W031 263 aaPredicted RBP19.08■□□□□ 0.64
CBX4-204ENST00000495122 UBE2Q2LH0YL09 131 aa19.08■□□□□ 0.64
CBX4-204ENST00000495122 NCLP19338 710 aaKnown RBP19.08■□□□□ 0.64
CBX4-204ENST00000495122 NF2P35240 595 aa19.08■□□□□ 0.64
CBX4-204ENST00000495122 NT5C2P49902 561 aa19.08■□□□□ 0.64
CBX4-204ENST00000495122 CFAP100Q494V2 611 aa19.08■□□□□ 0.64
CBX4-204ENST00000495122 LARP1BQ659C4 914 aaKnown RBP19.08■□□□□ 0.64
CBX4-204ENST00000495122 SALL1Q9NSC2 1324 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 GOLGA6L3A6NEY3 463 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 SPDYE2BA6NHP3 402 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 MBD4O95243 580 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 SPDYE6P0CI01 402 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 HIBADHP31937 336 aaKnown RBP19.07■□□□□ 0.64
CBX4-204ENST00000495122 SPTY2D1Q68D10 685 aaPredicted RBP19.07■□□□□ 0.64
CBX4-204ENST00000495122 GIMAP6Q6P9H5 292 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 NECAB1Q8N987 351 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 TMEM87BQ96K49 555 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 CSRNP1Q96S65 589 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 NAPBQ9H115 298 aa19.07■□□□□ 0.64
CBX4-204ENST00000495122 PRC1O43663 620 aa19.06■□□□□ 0.64
CBX4-204ENST00000495122 PCP11498 1178 aaKnown RBP19.06■□□□□ 0.64
CBX4-204ENST00000495122 TTLL12Q14166 644 aaPredicted RBP19.06■□□□□ 0.64
CBX4-204ENST00000495122 REM2Q8IYK8 340 aaPredicted RBP19.06■□□□□ 0.64
CBX4-204ENST00000495122 SYAP1Q96A49 352 aaPredicted RBP19.06■□□□□ 0.64
CBX4-204ENST00000495122 TCEANC2Q96MN5 208 aa19.06■□□□□ 0.64
CBX4-204ENST00000495122 LARP6Q9BRS8 491 aaKnown RBP19.06■□□□□ 0.64
CBX4-204ENST00000495122 KRT23Q9C075 422 aa19.06■□□□□ 0.64
CBX4-204ENST00000495122 RNF41Q9H4P4 317 aaPredicted RBP19.06■□□□□ 0.64
CBX4-204ENST00000495122 RNF186Q9NXI6 227 aa19.06■□□□□ 0.64
CBX4-204ENST00000495122 PRPF40AO75400 957 aaKnown RBP19.05■□□□□ 0.64
CBX4-204ENST00000495122 APPP05067 770 aa19.05■□□□□ 0.64
CBX4-204ENST00000495122 MFSD14BQ5SR56 506 aa19.05■□□□□ 0.64
CBX4-204ENST00000495122 IFNL3Q8IZI9 196 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms