RNA–Protein interactions for RNA: ENST00000494920.1

KDM1A-205, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-205ENST00000494920 CREBZFQ9NS37 354 aa13.21□□□□□ -0.29
KDM1A-205ENST00000494920 PI4KBQ9UBF8 816 aa13.21□□□□□ -0.29
KDM1A-205ENST00000494920 TLL2Q9Y6L7 1015 aa13.21□□□□□ -0.29
KDM1A-205ENST00000494920 PTPRFP10586 1907 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 USP17L12C9JPN9 530 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 USP17L21D6R901 530 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 HOOK2Q96ED9 719 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 DSCC1Q9BVC3 393 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 ZNF408Q9H9D4 720 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 MCM9Q9NXL9 1143 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 ARPP21Q9UBL0 812 aaPredicted RBP13.2□□□□□ -0.3
KDM1A-205ENST00000494920 HERC5Q9UII4 1024 aaKnown RBP13.2□□□□□ -0.3
KDM1A-205ENST00000494920 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
KDM1A-205ENST00000494920 FAM196BA6NMK8 535 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 FGAP02671 866 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 HSPA6P17066 643 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 SHMT1P34896 483 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 NF2P35240 595 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
KDM1A-205ENST00000494920 PTH1RQ03431 593 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 DCAF15Q66K64 600 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 TATDN1Q6P1N9 297 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.19□□□□□ -0.3
KDM1A-205ENST00000494920 MIGA2Q7L4E1 593 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 FOXP4Q8IVH2 680 aaPredicted RBP13.19□□□□□ -0.3
KDM1A-205ENST00000494920 RUFY2Q8WXA3 655 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 HHIPL1Q96JK4 782 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 ZNF341Q9BYN7 854 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 LSG1Q9H089 658 aaKnown RBP13.19□□□□□ -0.3
KDM1A-205ENST00000494920 NBPF3Q9H094 633 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 SERPINB13Q9UIV8 391 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 TACC3Q9Y6A5 838 aa13.19□□□□□ -0.3
KDM1A-205ENST00000494920 UNCXA6NJT0 531 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 RASSF10A6NK89 507 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 PPP1R12BO60237 982 aaPredicted RBP13.18□□□□□ -0.3
KDM1A-205ENST00000494920 HLA-DOAP06340 250 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 SLC4A8Q2Y0W8 1093 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 NOL9Q5SY16 702 aaKnown RBP13.18□□□□□ -0.3
KDM1A-205ENST00000494920 C16orf86Q6ZW13 317 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 TTC6Q86TZ1 520 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
KDM1A-205ENST00000494920 ANAPC4Q9UJX5 808 aa13.18□□□□□ -0.3
KDM1A-205ENST00000494920 ANGEL1Q9UNK9 670 aaKnown RBP13.18□□□□□ -0.3
KDM1A-205ENST00000494920 UBE2Q2LH0YL09 131 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 POLR3DP05423 398 aaPredicted RBP13.17□□□□□ -0.3
KDM1A-205ENST00000494920 FGRP09769 529 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 INPP5BP32019 993 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 TDO2P48775 406 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 HUNKP57058 714 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 JAG1P78504 1218 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 PRKG1Q13976 671 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 VGLL4Q14135 290 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 SHROOM1Q2M3G4 852 aaPredicted RBP13.17□□□□□ -0.3
KDM1A-205ENST00000494920 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 C2orf69Q8N8R5 385 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 SLC44A5Q8NCS7 719 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 MAP4K1Q92918 833 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 DYNLL2Q96FJ2 89 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 CLMNQ96JQ2 1002 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 NACAP1Q9BZK3 213 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 NAPBQ9H115 298 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.17□□□□□ -0.3
KDM1A-205ENST00000494920 SNCAIPQ9Y6H5 919 aa13.17□□□□□ -0.3
KDM1A-205ENST00000494920 APPP05067 770 aa13.16□□□□□ -0.3
KDM1A-205ENST00000494920 IREB2P48200 963 aaKnown RBP13.16□□□□□ -0.3
KDM1A-205ENST00000494920 MAP3K9P80192 1104 aa13.16□□□□□ -0.3
KDM1A-205ENST00000494920 HTRA3P83110 453 aa13.16□□□□□ -0.3
KDM1A-205ENST00000494920 PPARAQ07869 468 aa13.16□□□□□ -0.3
KDM1A-205ENST00000494920 WRNIP1Q96S55 665 aa13.16□□□□□ -0.3
KDM1A-205ENST00000494920 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.16□□□□□ -0.3
KDM1A-205ENST00000494920 FAM155AB1AL88 458 aaPredicted RBP13.15□□□□□ -0.3
KDM1A-205ENST00000494920 GJA5P36382 358 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 CDK8P49336 464 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 RASAL3Q86YV0 1011 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 ANKRD13AQ8IZ07 590 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 ZKSCAN4Q969J2 545 aaPredicted RBP13.15□□□□□ -0.3
KDM1A-205ENST00000494920 DDRGK1Q96HY6 314 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 SWAP70Q9UH65 585 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 PLIN4Q96Q06 1357 aa13.15□□□□□ -0.3
KDM1A-205ENST00000494920 SPDYE5A6NIY4 337 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 MINDY4BA8MYZ0 360 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 CTNND1O60716 968 aaKnown RBP13.14□□□□□ -0.31
KDM1A-205ENST00000494920 SLC10A3P09131 477 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 RASA1P20936 1047 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 GUCY1A2P33402 732 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 CAP2P40123 477 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
KDM1A-205ENST00000494920 C8orf34Q49A92 452 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 SCYL3Q8IZE3 742 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 NKX2-3Q8TAU0 364 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.14□□□□□ -0.31
KDM1A-205ENST00000494920 RBM8AQ9Y5S9 174 aaKnown RBP13.14□□□□□ -0.31
KDM1A-205ENST00000494920 TAF6LQ9Y6J9 622 aa13.14□□□□□ -0.31
KDM1A-205ENST00000494920 LOC285556D6RIA3 1793 aa13.13□□□□□ -0.31
KDM1A-205ENST00000494920 ORC4O43929 436 aa13.13□□□□□ -0.31
KDM1A-205ENST00000494920 CYP21A2P08686 494 aa13.13□□□□□ -0.31
KDM1A-205ENST00000494920 NECTIN1Q15223 517 aa13.13□□□□□ -0.31
KDM1A-205ENST00000494920 RGMBQ6NW40 437 aa13.13□□□□□ -0.31
KDM1A-205ENST00000494920 AMOTL1Q8IY63 956 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 225.9 ms