RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 TREML1Q86YW5 311 aa9.65□□□□□ -0.86
RPGR-210ENST00000494841 TRMT2AQ8IZ69 625 aaKnown RBP9.65□□□□□ -0.86
RPGR-210ENST00000494841 LINC00116Q8NCU8 138 aa9.65□□□□□ -0.86
RPGR-210ENST00000494841 CEP63Q96MT8 703 aa9.65□□□□□ -0.86
RPGR-210ENST00000494841 MYH16Q9H6N6 1097 aa9.65□□□□□ -0.86
RPGR-210ENST00000494841 IVNS1ABPQ9Y6Y0 642 aa9.65□□□□□ -0.86
RPGR-210ENST00000494841 TAF1LQ8IZX4 1826 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 KHNYNO15037 678 aaKnown RBP9.64□□□□□ -0.87
RPGR-210ENST00000494841 ZBTB39O15060 712 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 SNRPA1P09661 255 aaKnown RBP9.64□□□□□ -0.87
RPGR-210ENST00000494841 CYP19A1P11511 503 aaPredicted RBP9.64□□□□□ -0.87
RPGR-210ENST00000494841 EIF2S2P20042 333 aaKnown RBP9.64□□□□□ -0.87
RPGR-210ENST00000494841 MPSTP25325 297 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
RPGR-210ENST00000494841 IDH3AP50213 366 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 KRT76Q01546 638 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 DUSP27Q5VZP5 1158 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 BRD7Q9NPI1 651 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 PHF24Q9UPV7 400 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 TJP1Q07157 1748 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 C5P01031 1676 aa9.64□□□□□ -0.87
RPGR-210ENST00000494841 MYH14Q7Z406 1995 aaKnown RBP9.63□□□□□ -0.87
RPGR-210ENST00000494841 TCERG1O14776 1098 aaKnown RBP9.63□□□□□ -0.87
RPGR-210ENST00000494841 ICMTO60725 284 aa9.63□□□□□ -0.87
RPGR-210ENST00000494841 A1BGP04217 495 aa9.63□□□□□ -0.87
RPGR-210ENST00000494841 NPR3P17342 541 aa9.63□□□□□ -0.87
RPGR-210ENST00000494841 INPP5BP32019 993 aa9.63□□□□□ -0.87
RPGR-210ENST00000494841 COL25A1Q9BXS0 654 aaPredicted RBP9.63□□□□□ -0.87
RPGR-210ENST00000494841 RGPD3A6NKT7 1758 aaPredicted RBP9.63□□□□□ -0.87
RPGR-210ENST00000494841 RGPD4Q7Z3J3 1758 aa9.63□□□□□ -0.87
RPGR-210ENST00000494841 H3BRB1 525 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 OPLAHO14841 1288 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 VAMP4O75379 141 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 FGFR3P22607 806 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 CANXP27824 592 aaKnown RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 GRNP28799 593 aaKnown RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 GMPRP36959 345 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 CRKLP46109 303 aaKnown RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 FKBP4Q02790 459 aaKnown RBP eCLIP9.62□□□□□ -0.87
RPGR-210ENST00000494841 LAMC2Q13753 1193 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 ZNF827Q17R98 1081 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 TWISTNBQ3B726 338 aaPredicted RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 INTS5Q6P9B9 1019 aaKnown RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 AMIGO3Q86WK7 504 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 TEX13AQ9BXU3 409 aaPredicted RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
RPGR-210ENST00000494841 NUP188Q5SRE5 1749 aa9.62□□□□□ -0.87
RPGR-210ENST00000494841 RREB1Q92766 1687 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 PATL2C9JE40 543 aaKnown RBP9.61□□□□□ -0.87
RPGR-210ENST00000494841 STARD3NLO95772 234 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 ANXA1P04083 346 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 CD33P20138 364 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 ARSDP51689 593 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 SFSWAPQ12872 951 aaKnown RBP9.61□□□□□ -0.87
RPGR-210ENST00000494841 C4BP0C0L5 1744 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 COL5A3P25940 1745 aaPredicted RBP9.61□□□□□ -0.87
RPGR-210ENST00000494841 ZNF831Q5JPB2 1677 aa9.61□□□□□ -0.87
RPGR-210ENST00000494841 SOWAHDA6NJG2 315 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 MYL6BP14649 208 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 ZAP70P43403 619 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 GRIN2CQ14957 1233 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 ECM1Q16610 540 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 PROSER3Q2NL68 480 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 CCDC87Q9NVE4 849 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 ZBTB1Q9Y2K1 713 aa9.6□□□□□ -0.87
RPGR-210ENST00000494841 EIF1AXP47813 144 aaKnown RBP9.59□□□□□ -0.87
RPGR-210ENST00000494841 CTBSQ01459 385 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 SLC15A2Q16348 729 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 ATCAYQ86WG3 371 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 GLYCTKQ8IVS8 523 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 PDGFDQ9GZP0 370 aaPredicted RBP9.59□□□□□ -0.87
RPGR-210ENST00000494841 STK32BQ9NY57 414 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 TFCP2L1Q9NZI6 479 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 MARK1Q9P0L2 795 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 CHPF2Q9P2E5 772 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 KCNH4Q9UQ05 1017 aa9.59□□□□□ -0.87
RPGR-210ENST00000494841 CNTNAP4Q9C0A0 1308 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 SRCAPQ6ZRS2 3230 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 LAMB4A4D0S4 1761 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 RPS6KA4O75676 772 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 FAM13AO94988 1023 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 MX2P20592 715 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 R3HDM1Q15032 1099 aaKnown RBP9.58□□□□□ -0.88
RPGR-210ENST00000494841 NOM1Q5C9Z4 860 aaKnown RBP9.58□□□□□ -0.88
RPGR-210ENST00000494841 CNTNAP3BQ96NU0 1288 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 CNTNAP3Q9BZ76 1288 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 USP20Q9Y2K6 914 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 RTCBQ9Y3I0 505 aaKnown RBP9.58□□□□□ -0.88
RPGR-210ENST00000494841 TUBGCP6Q96RT7 1819 aa9.58□□□□□ -0.88
RPGR-210ENST00000494841 UBR3Q6ZT12 1888 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 CICQ96RK0 1608 aaPredicted RBP9.57□□□□□ -0.88
RPGR-210ENST00000494841 C2CD2LO14523 706 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 HOXB7P09629 217 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 EIF5P55010 431 aaKnown RBP9.57□□□□□ -0.88
RPGR-210ENST00000494841 AIMP1Q12904 312 aaKnown RBP9.57□□□□□ -0.88
RPGR-210ENST00000494841 TRAPPC3LQ5T215 181 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 CCDC30Q5VVM6 783 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 G2E3Q7L622 706 aa9.57□□□□□ -0.88
RPGR-210ENST00000494841 COL23A1Q86Y22 540 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms