RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 DNM1Q05193 864 aaKnown RBP21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 OLFM4Q6UX06 510 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 FERMT3Q86UX7 667 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 TSPY26PQ9H489 355 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 SENP2Q9HC62 589 aa21.6■■□□□ 1.05
TSPAN4-212ENST00000494815 TCHHQ07283 1943 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 CYP2D7A0A087X1C5 515 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 FDPSP14324 419 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 WTAPQ15007 396 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 CPLX2Q6PUV4 134 aaKnown RBP21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 SYNE3Q6ZMZ3 975 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 DEFB132Q7Z7B7 95 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 RGS22Q8NE09 1264 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 GDPD2Q9HCC8 539 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 LAMB1P07942 1786 aa21.59■■□□□ 1.05
TSPAN4-212ENST00000494815 GPR75-ASB3A0A0A6YYF3 556 aa21.58■■□□□ 1.05
TSPAN4-212ENST00000494815 PLCG2P16885 1265 aa21.58■■□□□ 1.05
TSPAN4-212ENST00000494815 KRT85P78386 507 aa21.58■■□□□ 1.05
TSPAN4-212ENST00000494815 SH3RF3Q8TEJ3 882 aaPredicted RBP21.58■■□□□ 1.05
TSPAN4-212ENST00000494815 USP5P45974 858 aa21.58■■□□□ 1.04
TSPAN4-212ENST00000494815 GTF2IP78347 998 aa21.58■■□□□ 1.04
TSPAN4-212ENST00000494815 MICU3Q86XE3 530 aa21.58■■□□□ 1.04
TSPAN4-212ENST00000494815 STK11IPQ8N1F8 1099 aa21.58■■□□□ 1.04
TSPAN4-212ENST00000494815 GAKO14976 1311 aa21.58■■□□□ 1.04
TSPAN4-212ENST00000494815 MYH2Q9UKX2 1941 aa21.58■■□□□ 1.04
TSPAN4-212ENST00000494815 RESTQ13127 1097 aa21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 RNF214Q8ND24 703 aa21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 MCM9Q9NXL9 1143 aa21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 GOLGA8AA7E2F4 631 aa21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 SMIM22K7EJ46 135 aa21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 RAB11FIP4Q86YS3 637 aa21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 ORC3Q9UBD5 711 aaPredicted RBP21.57■■□□□ 1.04
TSPAN4-212ENST00000494815 DYNC1I1O14576 645 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 FIBPO43427 364 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 BTDP43251 543 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 PDE4BQ07343 736 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 SEC23AQ15436 765 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 IQCA1Q86XH1 822 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 AMOTL1Q8IY63 956 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 SLC16A10Q8TF71 515 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 ZKSCAN3Q9BRR0 538 aa21.56■■□□□ 1.04
TSPAN4-212ENST00000494815 UBE2HP62256 183 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 C12orf60Q5U649 245 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 SASS6Q6UVJ0 657 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 FAM13BQ9NYF5 915 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 TNKSO95271 1327 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 ROBO3Q96MS0 1386 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 RANBP6O60518 1105 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 CHRNA5P30532 468 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 ADD1P35611 737 aaKnown RBP21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 CC2D2BQ6DHV5 1058 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 PODNQ7Z5L7 613 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 ZSCAN10Q96SZ4 725 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 SCAND2PQ9GZW5 306 aaPredicted RBP21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 C10orf71Q711Q0 1435 aa21.55■■□□□ 1.04
TSPAN4-212ENST00000494815 CDC27P30260 824 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 ELP1O95163 1332 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 SLX4Q8IY92 1834 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 G3V3G9 751 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 PPP2R5BQ15173 497 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 NTRK3Q16288 839 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 DCAF8Q5TAQ9 597 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 C7orf43Q8WVR3 580 aa21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 FAM217BQ9NTX9 383 aaPredicted RBP21.54■■□□□ 1.04
TSPAN4-212ENST00000494815 CCDC196A0A1B0GTZ2 297 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 GADD45BO75293 160 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 USP17L8P0C7I0 530 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 CYP2D6P10635 497 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 RXRAP19793 462 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 MTERF4Q7Z6M4 381 aaKnown RBP21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 ENAHQ8N8S7 591 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 TGFBRAP1Q8WUH2 860 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 C8orf76Q96K31 380 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 PPFIA3O75145 1194 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 PRDM1O75626 825 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 DOK7Q18PE1 504 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 ZNF654Q8IZM8 581 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 FBXO18Q8NFZ0 1043 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 MYL10Q9BUA6 226 aa21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 PDGFDQ9GZP0 370 aaPredicted RBP21.53■■□□□ 1.04
TSPAN4-212ENST00000494815 STK36Q9NRP7 1315 aa21.52■■□□□ 1.04
TSPAN4-212ENST00000494815 RHBDL3P58872 404 aa21.52■■□□□ 1.04
TSPAN4-212ENST00000494815 FAM173BQ6P4H8 233 aa21.52■■□□□ 1.04
TSPAN4-212ENST00000494815 CCDC125Q86Z20 511 aa21.52■■□□□ 1.04
TSPAN4-212ENST00000494815 TEX11Q8IYF3 940 aa21.52■■□□□ 1.04
TSPAN4-212ENST00000494815 PTMAP06454 111 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 IFNAR1P17181 557 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 KIAA2012Q0VF49 1180 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 RTN1Q16799 776 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 ATL3Q6DD88 541 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 CERS5Q8N5B7 392 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 DAGLAQ9Y4D2 1042 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 NAV1Q8NEY1 1877 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 IARSP41252 1262 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 EVX2Q03828 476 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 IFIT1BQ5T764 474 aaKnown RBP21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 CCDC144CPQ8IYA2 1237 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 FBXW7Q969H0 707 aa21.51■■□□□ 1.03
TSPAN4-212ENST00000494815 SNED1Q8TER0 1413 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms