RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 JMYQ8N9B5 988 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
ZIC4-216ENST00000494569 KDM4AO75164 1064 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 PPP4CP60510 307 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 SYCE3A1L190 88 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 ORC4O43929 436 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 GRIK5Q16478 980 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 VPS37DQ86XT2 251 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 FBXO18Q8NFZ0 1043 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 RNF41Q9H4P4 317 aaPredicted RBP12.85□□□□□ -0.35
ZIC4-216ENST00000494569 KIF3AQ9Y496 699 aa12.85□□□□□ -0.35
ZIC4-216ENST00000494569 TDO2P48775 406 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 FSTL1Q12841 308 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 HS1BP3Q53T59 392 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 FAM184AQ8NB25 1140 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 WDR66Q8TBY9 1149 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 DCP1AQ9NPI6 582 aaPredicted RBP12.84□□□□□ -0.35
ZIC4-216ENST00000494569 ATP8A2Q9NTI2 1148 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 MYH1P12882 1939 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 AP5Z1O43299 807 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 SNW1Q13573 536 aaKnown RBP12.84□□□□□ -0.35
ZIC4-216ENST00000494569 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 ENGASEQ8NFI3 743 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 RPGRQ92834 1020 aaKnown RBP12.84□□□□□ -0.35
ZIC4-216ENST00000494569 SYAP1Q96A49 352 aaPredicted RBP12.84□□□□□ -0.35
ZIC4-216ENST00000494569 POLLQ9UGP5 575 aa12.84□□□□□ -0.35
ZIC4-216ENST00000494569 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.35
ZIC4-216ENST00000494569 TBC1D16Q8TBP0 767 aa12.83□□□□□ -0.35
ZIC4-216ENST00000494569 FAM205AQ6ZU69 1335 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.36
ZIC4-216ENST00000494569 METAP2P50579 478 aaKnown RBP eCLIP12.83□□□□□ -0.36
ZIC4-216ENST00000494569 TMEM67Q5HYA8 995 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 SHISA4Q96DD7 197 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 CD209Q9NNX6 404 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 KCNG1Q9UIX4 513 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 SRGNP10124 158 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 NT5C2P49902 561 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 EVX2Q03828 476 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 NLGN1Q8N2Q7 840 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 CEP350Q5VT06 3117 aa12.83□□□□□ -0.36
ZIC4-216ENST00000494569 FMNL1O95466 1100 aaPredicted RBP12.82□□□□□ -0.36
ZIC4-216ENST00000494569 IFNAR1P17181 557 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 FAM163AQ96GL9 167 aaPredicted RBP12.82□□□□□ -0.36
ZIC4-216ENST00000494569 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
ZIC4-216ENST00000494569 KIF28PB7ZC32 967 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 ZBTB43O43298 467 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 FUT2Q10981 343 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 SECISBP2LQ93073 1101 aaKnown RBP12.82□□□□□ -0.36
ZIC4-216ENST00000494569 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 ANKIB1Q9P2G1 1089 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 ORC3Q9UBD5 711 aaPredicted RBP12.82□□□□□ -0.36
ZIC4-216ENST00000494569 ATP6V0A2Q9Y487 856 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 H3BQV1 296 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 LIG1P18858 919 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 KIF23Q02241 960 aaPredicted RBP12.82□□□□□ -0.36
ZIC4-216ENST00000494569 TMTC2Q8N394 836 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 SPATA32Q96LK8 384 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 GAKO14976 1311 aa12.82□□□□□ -0.36
ZIC4-216ENST00000494569 IFIT3O14879 490 aaKnown RBP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 MMP10P09238 476 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 GPR101Q96P66 508 aaPredicted RBP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 TFIP11Q9UBB9 837 aaKnown RBP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 ARPP21Q9UBL0 812 aaPredicted RBP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 GGA1Q9UJY5 639 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 CFAP45Q9UL16 551 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 MORC2Q9Y6X9 1032 aaPredicted RBP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 MROH7-TTC4A0A0A0MT08 1334 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 CYP2D7A0A087X1C5 515 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 FAM237AA0A1B0GTK4 181 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 USP28Q96RU2 1077 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 AATFQ9NY61 560 aaKnown RBP eCLIP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.81□□□□□ -0.36
ZIC4-216ENST00000494569 MYH8P13535 1937 aa12.81□□□□□ -0.36
ZIC4-216ENST00000494569 CDKL5O76039 1030 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 U2AF2P26368 475 aaKnown RBP eCLIP12.8□□□□□ -0.36
ZIC4-216ENST00000494569 BRAPQ7Z569 592 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 CNPY4Q8N129 248 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 ENAHQ8N8S7 591 aaPredicted RBP12.8□□□□□ -0.36
ZIC4-216ENST00000494569 CRNKL1Q9BZJ0 848 aaKnown RBP12.8□□□□□ -0.36
ZIC4-216ENST00000494569 RNF216Q9NWF9 866 aaPredicted RBP12.8□□□□□ -0.36
ZIC4-216ENST00000494569 PPEF1O14829 653 aaPredicted RBP12.8□□□□□ -0.36
ZIC4-216ENST00000494569 RAB11FIP4Q86YS3 637 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 TEX2Q8IWB9 1127 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 ANKS1AQ92625 1134 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 ESR2Q92731 530 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 ZSCAN10Q96SZ4 725 aaPredicted RBP12.8□□□□□ -0.36
ZIC4-216ENST00000494569 GPR75-ASB3A0A0A6YYF3 556 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 UFL1O94874 794 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 WTAPQ15007 396 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 UVSSAQ2YD98 709 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 C12orf60Q5U649 245 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 C8orf76Q96K31 380 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 TSPY26PQ9H489 355 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 GOLPH3LQ9H4A5 285 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 POLR3EQ9NVU0 708 aa12.8□□□□□ -0.36
ZIC4-216ENST00000494569 TNKSO95271 1327 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 GOLGA8AA7E2F4 631 aa12.79□□□□□ -0.36
ZIC4-216ENST00000494569 USP17L12C9JPN9 530 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms