RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 NTF4P34130 210 aa4.57□□□□□ -1.68
PTPN12-212ENST00000494248 ABHD4Q8TB40 342 aa4.57□□□□□ -1.68
PTPN12-212ENST00000494248 DDX54Q8TDD1 881 aaKnown RBP4.57□□□□□ -1.68
PTPN12-212ENST00000494248 XYLT2Q9H1B5 865 aa4.57□□□□□ -1.68
PTPN12-212ENST00000494248 PRDM10Q9NQV6 1147 aa4.57□□□□□ -1.68
PTPN12-212ENST00000494248 GTF2IRD1Q9UHL9 959 aa4.57□□□□□ -1.68
PTPN12-212ENST00000494248 GSTP1P09211 210 aaKnown RBP4.56□□□□□ -1.68
PTPN12-212ENST00000494248 SRFP11831 508 aa4.56□□□□□ -1.68
PTPN12-212ENST00000494248 ATP2B4P23634 1241 aa4.56□□□□□ -1.68
PTPN12-212ENST00000494248 ZC3H12AQ5D1E8 599 aaKnown RBP4.56□□□□□ -1.68
PTPN12-212ENST00000494248 KIAA0319Q5VV43 1072 aa4.56□□□□□ -1.68
PTPN12-212ENST00000494248 PDZD3Q86UT5 571 aa4.56□□□□□ -1.68
PTPN12-212ENST00000494248 CXorf38Q8TB03 319 aa4.56□□□□□ -1.68
PTPN12-212ENST00000494248 BAHD1Q8TBE0 780 aaPredicted RBP4.56□□□□□ -1.68
PTPN12-212ENST00000494248 SLC26A8Q96RN1 970 aa4.56□□□□□ -1.68
PTPN12-212ENST00000494248 NPAS4Q8IUM7 802 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 GJD3Q8N144 294 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 RNF214Q8ND24 703 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 STK35Q8TDR2 534 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 MCOLN1Q9GZU1 580 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 SSU72Q9NP77 194 aaKnown RBP4.55□□□□□ -1.68
PTPN12-212ENST00000494248 KRT82Q9NSB4 513 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 CCDC87Q9NVE4 849 aa4.55□□□□□ -1.68
PTPN12-212ENST00000494248 DNAJC25-GNG10A0A024R161 153 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.54□□□□□ -1.68
PTPN12-212ENST00000494248 MYOCOSA0A1B0GUC4 107 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 OTOL1A6NHN0 477 aaPredicted RBP4.54□□□□□ -1.68
PTPN12-212ENST00000494248 DLG4P78352 724 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 EHHADHQ08426 723 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 RALGPS1Q5JS13 557 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 TTC6Q86TZ1 520 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 GTF3C2Q8WUA4 911 aaPredicted RBP4.54□□□□□ -1.68
PTPN12-212ENST00000494248 ALPK1Q96QP1 1244 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 DNAJC25Q9H1X3 360 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 SP110Q9HB58 689 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 ABCB6Q9NP58 842 aa4.54□□□□□ -1.68
PTPN12-212ENST00000494248 GNAT3A8MTJ3 354 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 H3BS24 57 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 ATG7O95352 703 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 NPR3P17342 541 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 TRHRP34981 398 aaPredicted RBP4.53□□□□□ -1.68
PTPN12-212ENST00000494248 ERVK-24P63145 666 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 CDKAL1Q5VV42 579 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 GCM1Q9NP62 436 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 SLAMF8Q9P0V8 285 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 ST14Q9Y5Y6 855 aa4.53□□□□□ -1.68
PTPN12-212ENST00000494248 PTPN12Q05209 780 aaKnown RBP4.52□□□□□ -1.69
PTPN12-212ENST00000494248 MPRIPQ6WCQ1 1025 aa4.52□□□□□ -1.69
PTPN12-212ENST00000494248 MENTQ9BUN1 341 aa4.52□□□□□ -1.69
PTPN12-212ENST00000494248 RNF32Q9H0A6 362 aa4.52□□□□□ -1.69
PTPN12-212ENST00000494248 EHD4Q9H223 541 aa4.52□□□□□ -1.69
PTPN12-212ENST00000494248 USP5P45974 858 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 SSPNQ14714 243 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 PPM1JQ5JR12 505 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 ALKBH2Q6NS38 261 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 PANK1Q8TE04 598 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 MYLIPQ8WY64 445 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 KCNB2Q92953 911 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 SGPP1Q9BX95 441 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 PRDM5Q9NQX1 630 aaPredicted RBP4.51□□□□□ -1.69
PTPN12-212ENST00000494248 CSADQ9Y600 493 aa4.51□□□□□ -1.69
PTPN12-212ENST00000494248 SLITRK5O94991 958 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 HPXP02790 462 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 CELA3BP08861 270 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 HK2P52789 917 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 AAMPQ13685 434 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 PUM1Q14671 1186 aaKnown RBP eCLIP4.5□□□□□ -1.69
PTPN12-212ENST00000494248 RPS26P11Q5JNZ5 115 aaPredicted RBP4.5□□□□□ -1.69
PTPN12-212ENST00000494248 TCERG1LQ5VWI1 586 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 FOXQ1Q9C009 403 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 NPHS2Q9NP85 383 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 ZNF777Q9ULD5 760 aaPredicted RBP4.5□□□□□ -1.69
PTPN12-212ENST00000494248 CNOT6Q9ULM6 557 aaKnown RBP4.5□□□□□ -1.69
PTPN12-212ENST00000494248 MAPK8IP1Q9UQF2 711 aa4.5□□□□□ -1.69
PTPN12-212ENST00000494248 FGD1P98174 961 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 RING1Q06587 406 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 TIGD5Q53EQ6 642 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 FEZF2Q8TBJ5 459 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 GPBAR1Q8TDU6 330 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 ADAMTS10Q9H324 1103 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 C19orf44Q9H6X5 657 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 KCTD3Q9Y597 815 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 CAPN6Q9Y6Q1 641 aa4.49□□□□□ -1.69
PTPN12-212ENST00000494248 TMEM238LA0A1B0GVL6 79 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 WASH4PA8MWX3 477 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 FAM155AB1AL88 458 aaPredicted RBP4.48□□□□□ -1.69
PTPN12-212ENST00000494248 ESR1P03372 595 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 RAC2P15153 192 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 PRPF40BQ6NWY9 871 aaKnown RBP4.48□□□□□ -1.69
PTPN12-212ENST00000494248 ZNF605Q86T29 641 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 UBE2FQ969M7 185 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 CACNA2D2Q9NY47 1150 aa4.48□□□□□ -1.69
PTPN12-212ENST00000494248 INSRRP14616 1297 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 EFEMP1Q12805 493 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 C22orf34Q6ZV56 151 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 ARMCX6Q7L4S7 300 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 ZDHHC14Q8IZN3 488 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 MFSD4AQ8N468 514 aa4.47□□□□□ -1.69
PTPN12-212ENST00000494248 RIN3Q8TB24 985 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms