RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 DBF4Q9UBU7 674 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-213ENST00000494016 PCDHGC4Q9Y5F7 938 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 LRRFIP2Q9Y608 721 aaKnown RBP7.4□□□□□ -1.22
CPSF7-213ENST00000494016 GJA3Q9Y6H8 435 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 SALL3Q9BXA9 1300 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 KDM6AO15550 1401 aaPredicted RBP7.4□□□□□ -1.22
CPSF7-213ENST00000494016 PXDNLA1KZ92 1463 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 MEGF6O75095 1541 aa7.4□□□□□ -1.22
CPSF7-213ENST00000494016 WNK3Q9BYP7 1800 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 TNS1Q9HBL0 1735 aaKnown RBP7.39□□□□□ -1.23
CPSF7-213ENST00000494016 ADCY9O60503 1353 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 ATXN7O15265 892 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-213ENST00000494016 PTCD1O75127 700 aaKnown RBP7.39□□□□□ -1.23
CPSF7-213ENST00000494016 CDC45O75419 566 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 SDSP20132 328 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 KRT76Q01546 638 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 SLC39A6Q13433 755 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 SF3B2Q13435 895 aaKnown RBP7.39□□□□□ -1.23
CPSF7-213ENST00000494016 BECN1Q14457 450 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 NFKBIBQ15653 356 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 RNFT1Q5M7Z0 435 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 KSR2Q6VAB6 950 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 LRRC69Q6ZNQ3 347 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 UNC5CLQ8IV45 518 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 IFNL2Q8IZJ0 200 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 SUSD3Q96L08 255 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 SRCIN1Q9C0H9 1055 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 ANKIB1Q9P2G1 1089 aa7.39□□□□□ -1.23
CPSF7-213ENST00000494016 ATXN7L1Q9ULK2 861 aaPredicted RBP7.39□□□□□ -1.23
CPSF7-213ENST00000494016 PLEKHG2Q9H7P9 1386 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 BNIP3LO60238 219 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 ALDH1L1O75891 902 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 NBPF7P0C2Y1 421 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-213ENST00000494016 UBTFL1P0CB47 393 aaPredicted RBP7.38□□□□□ -1.23
CPSF7-213ENST00000494016 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 PDE1AP54750 535 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 PDE4CQ08493 712 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 HIF1AQ16665 826 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 XP32Q5T750 250 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 ZNF790Q6PG37 636 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 CAPN12Q6ZSI9 719 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 PPP1R42Q7Z4L9 355 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 DCAF5Q96JK2 942 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 HSH2DQ96JZ2 352 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 USP26Q9BXU7 913 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 NEUROD4Q9HD90 331 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 DDX21Q9NR30 783 aaKnown RBP eCLIP7.38□□□□□ -1.23
CPSF7-213ENST00000494016 HYPKQ9NX55 129 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 USP35Q9P2H5 1018 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 STAP2Q9UGK3 403 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 PHF24Q9UPV7 400 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 EXOC6BQ9Y2D4 811 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 MAP3K2Q9Y2U5 619 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 PKD1L3Q7Z443 1732 aa7.38□□□□□ -1.23
CPSF7-213ENST00000494016 IBTKQ9P2D0 1353 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-213ENST00000494016 TNP2Q05952 138 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 LRP10Q7Z4F1 713 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 ZNF280CQ8ND82 737 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 FOXD4L4Q8WXT5 416 aaPredicted RBP7.37□□□□□ -1.23
CPSF7-213ENST00000494016 SNX21Q969T3 373 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 ABHD17AQ96GS6 310 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 MKNK1Q9BUB5 465 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 LRRCC1Q9C099 1032 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 USP16Q9Y5T5 823 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 C5P01031 1676 aa7.37□□□□□ -1.23
CPSF7-213ENST00000494016 TUBGCP6Q96RT7 1819 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 UTYO14607 1347 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 WDR17Q8IZU2 1322 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 EFSO43281 561 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 RAB11FIP3O75154 756 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 YY1P25490 414 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 MTX1Q13505 466 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 VPS72Q15906 364 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 COX20Q5RI15 118 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 IER5Q5VY09 327 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
CPSF7-213ENST00000494016 CNTNAP3BQ96NU0 1288 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 CNTNAP3Q9BZ76 1288 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 BCL11AQ9H165 835 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 KLK14Q9P0G3 267 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 LRFN2Q9ULH4 789 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
CPSF7-213ENST00000494016 RNF225M0QZC1 329 aaPredicted RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 SURF6O75683 361 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 IGKV5-2P06315 115 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 HSP90AB1P08238 724 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 MAPTP10636 758 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 FGFR3P22607 806 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 DEKP35659 375 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 CABP4P57796 275 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 DGKZQ13574 1117 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 CWF19L2Q2TBE0 894 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 C11orf91Q3C1V1 193 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 C16orf46Q6P387 395 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 LINS1Q8NG48 757 aa7.35□□□□□ -1.23
CPSF7-213ENST00000494016 ZCRB1Q8TBF4 217 aaKnown RBP7.35□□□□□ -1.23
CPSF7-213ENST00000494016 KAZALD1Q96I82 304 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms