RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 MIGA1Q8NAN2 632 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 YTHDC1Q96MU7 727 aaKnown RBP15.41■□□□□ 0.06
HSPG2-212ENST00000493940 AFG3L2Q9Y4W6 797 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 PCDHB15Q9Y5E8 787 aa15.41■□□□□ 0.06
HSPG2-212ENST00000493940 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
HSPG2-212ENST00000493940 COL2A1P02458 1487 aaPredicted RBP15.4■□□□□ 0.06
HSPG2-212ENST00000493940 NAV1Q8NEY1 1877 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 CTGFP29279 349 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 SLC4A8Q2Y0W8 1093 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 OTUD7BQ6GQQ9 843 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 ARHGAP39Q9C0H5 1083 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.4■□□□□ 0.06
HSPG2-212ENST00000493940 PALD1Q9ULE6 856 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 TRIM17Q9Y577 477 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 ZHX2Q9Y6X8 837 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 FLT1P17948 1338 aa15.4■□□□□ 0.06
HSPG2-212ENST00000493940 LOC285556D6RIA3 1793 aa15.39■□□□□ 0.05
HSPG2-212ENST00000493940 MYH8P13535 1937 aa15.39■□□□□ 0.05
HSPG2-212ENST00000493940 CTNND1O60716 968 aaKnown RBP15.39■□□□□ 0.05
HSPG2-212ENST00000493940 RAB11FIP3O75154 756 aa15.39■□□□□ 0.05
HSPG2-212ENST00000493940 HMMRO75330 724 aa15.39■□□□□ 0.05
HSPG2-212ENST00000493940 SP3Q02447 781 aa15.39■□□□□ 0.05
HSPG2-212ENST00000493940 FBXO46Q6PJ61 603 aaPredicted RBP15.39■□□□□ 0.05
HSPG2-212ENST00000493940 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
HSPG2-212ENST00000493940 SAP30BPQ9UHR5 308 aaKnown RBP15.39■□□□□ 0.05
HSPG2-212ENST00000493940 ADGRA2Q96PE1 1338 aa15.39■□□□□ 0.05
HSPG2-212ENST00000493940 TCRBV5S4A2TA0A5A2 114 aa15.38■□□□□ 0.05
HSPG2-212ENST00000493940 PDHXO00330 501 aa15.38■□□□□ 0.05
HSPG2-212ENST00000493940 TLR2O60603 784 aa15.38■□□□□ 0.05
HSPG2-212ENST00000493940 ECM2O94769 699 aaPredicted RBP15.38■□□□□ 0.05
HSPG2-212ENST00000493940 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
HSPG2-212ENST00000493940 METTL16Q86W50 562 aaKnown RBP15.38■□□□□ 0.05
HSPG2-212ENST00000493940 RIOK1Q9BRS2 568 aaKnown RBP15.38■□□□□ 0.05
HSPG2-212ENST00000493940 BOLA2Q9H3K6 86 aa15.38■□□□□ 0.05
HSPG2-212ENST00000493940 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
HSPG2-212ENST00000493940 PDE4DIPQ5VU43 2346 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
HSPG2-212ENST00000493940 GOLIM4O00461 696 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 CXCL11O14625 94 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 BAG3O95817 575 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 IFIT2P09913 472 aaKnown RBP15.37■□□□□ 0.05
HSPG2-212ENST00000493940 C17orf99Q6UX52 265 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
HSPG2-212ENST00000493940 ANKRD23Q86SG2 305 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
HSPG2-212ENST00000493940 CPA4Q9UI42 421 aa15.37■□□□□ 0.05
HSPG2-212ENST00000493940 TRIM75PA6NK02 468 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 SMIM22K7EJ46 135 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 CYP2C8P10632 490 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 PDE6AP16499 860 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 CAP2P40123 477 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
HSPG2-212ENST00000493940 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.36■□□□□ 0.05
HSPG2-212ENST00000493940 DCTPP1Q9H773 170 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 PICK1Q9NRD5 415 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 PI4KBQ9UBF8 816 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
HSPG2-212ENST00000493940 RBBP6Q7Z6E9 1792 aaKnown RBP15.35■□□□□ 0.05
HSPG2-212ENST00000493940 ATP5JP18859 108 aa15.35■□□□□ 0.05
HSPG2-212ENST00000493940 SLC9C2Q5TAH2 1124 aa15.35■□□□□ 0.05
HSPG2-212ENST00000493940 ERO1AQ96HE7 468 aa15.35■□□□□ 0.05
HSPG2-212ENST00000493940 CRBNQ96SW2 442 aa15.35■□□□□ 0.05
HSPG2-212ENST00000493940 NOL10Q9BSC4 688 aaKnown RBP15.35■□□□□ 0.05
HSPG2-212ENST00000493940 LRRCC1Q9C099 1032 aa15.35■□□□□ 0.05
HSPG2-212ENST00000493940 ZCCHC17Q9NP64 241 aaKnown RBP15.35■□□□□ 0.05
HSPG2-212ENST00000493940 ZNF532Q9HCE3 1301 aa15.35■□□□□ 0.05
HSPG2-212ENST00000493940 PLCG2P16885 1265 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 PLCD1P51178 756 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 MAP3K12Q12852 859 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 SPP2Q13103 211 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 TREML2Q5T2D2 321 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 TSHZ3Q63HK5 1081 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 GADL1Q6ZQY3 521 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 CHMP4BQ9H444 224 aaKnown RBP15.34■□□□□ 0.05
HSPG2-212ENST00000493940 EFCC1Q9HA90 598 aa15.34■□□□□ 0.05
HSPG2-212ENST00000493940 PLXNB2O15031 1838 aa15.33■□□□□ 0.05
HSPG2-212ENST00000493940 GDF11O95390 407 aa15.33■□□□□ 0.04
HSPG2-212ENST00000493940 LACTBP83111 547 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-212ENST00000493940 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-212ENST00000493940 LCORLQ8N3X6 602 aa15.33■□□□□ 0.04
HSPG2-212ENST00000493940 OTUD7AQ8TE49 926 aaPredicted RBP15.33■□□□□ 0.04
HSPG2-212ENST00000493940 HAUS7Q99871 368 aa15.33■□□□□ 0.04
HSPG2-212ENST00000493940 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.04
HSPG2-212ENST00000493940 PAG1Q9NWQ8 432 aa15.33■□□□□ 0.04
HSPG2-212ENST00000493940 HERC5Q9UII4 1024 aaKnown RBP15.33■□□□□ 0.04
HSPG2-212ENST00000493940 PRKAB2O43741 272 aa15.32■□□□□ 0.04
HSPG2-212ENST00000493940 IGSF3O75054 1194 aa15.32■□□□□ 0.04
HSPG2-212ENST00000493940 BCRP11274 1271 aa15.32■□□□□ 0.04
HSPG2-212ENST00000493940 SDR42E1Q8WUS8 393 aa15.32■□□□□ 0.04
HSPG2-212ENST00000493940 TRIM47Q96LD4 638 aa15.32■□□□□ 0.04
HSPG2-212ENST00000493940 PTCH2Q9Y6C5 1203 aa15.32■□□□□ 0.04
HSPG2-212ENST00000493940 MAGEB6P1A0A0J9YX57 407 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 POTEFA5A3E0 1075 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 PEX10O60683 326 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 CYP2D6P10635 497 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 ADD2P35612 726 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 USP5P45974 858 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 TTF1Q15361 905 aaPredicted RBP15.31■□□□□ 0.04
HSPG2-212ENST00000493940 ARMT1Q9H993 441 aa15.31■□□□□ 0.04
HSPG2-212ENST00000493940 USP17L5A8MUK1 530 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms