RNA–Protein interactions for RNA: ENST00000493864.1

TRA2B-216, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-216ENST00000493864 DDB1Q16531 1140 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 KRT25Q7Z3Z0 450 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 MARCH10Q8NA82 808 aaPredicted RBP8.47□□□□□ -1.05
TRA2B-216ENST00000493864 DCAF5Q96JK2 942 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 CNTNAP3BQ96NU0 1288 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 PNMA5Q96PV4 448 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 CNTNAP3Q9BZ76 1288 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 GSX2Q9BZM3 304 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 MYH16Q9H6N6 1097 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 FNDC3AQ9Y2H6 1198 aaKnown RBP8.47□□□□□ -1.05
TRA2B-216ENST00000493864 PCDH11XQ9BZA7 1347 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 PCDH11YQ9BZA8 1340 aa8.47□□□□□ -1.05
TRA2B-216ENST00000493864 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.05
TRA2B-216ENST00000493864 A6NHS1 94 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 SASH3O75995 380 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 RPLP1P05386 114 aaKnown RBP8.46□□□□□ -1.06
TRA2B-216ENST00000493864 HSP90AB1P08238 724 aaKnown RBP8.46□□□□□ -1.06
TRA2B-216ENST00000493864 GMPRP36959 345 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 USP5P45974 858 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 KRT76Q01546 638 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 TEFQ10587 303 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 TREML4Q6UXN2 200 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 BHMTQ93088 406 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 IFT57Q9NWB7 429 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 NSFL1CQ9UNZ2 370 aaKnown RBP8.46□□□□□ -1.06
TRA2B-216ENST00000493864 CEMIPQ8WUJ3 1361 aa8.46□□□□□ -1.06
TRA2B-216ENST00000493864 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.06
TRA2B-216ENST00000493864 TARSP26639 723 aaKnown RBP8.45□□□□□ -1.06
TRA2B-216ENST00000493864 CABP4P57796 275 aa8.45□□□□□ -1.06
TRA2B-216ENST00000493864 EXOSC9Q06265 439 aaKnown RBP8.45□□□□□ -1.06
TRA2B-216ENST00000493864 SLC52A2Q9HAB3 445 aa8.45□□□□□ -1.06
TRA2B-216ENST00000493864 FANCIQ9NVI1 1328 aa8.45□□□□□ -1.06
TRA2B-216ENST00000493864 SHANK3Q9BYB0 1731 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 ERVV-2B6SEH9 535 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 KCNQ3O43525 872 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 EGFRP00533 1210 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 NFKB1P19838 968 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 ZNF438Q7Z4V0 828 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 DEFB132Q7Z7B7 95 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 GJD3Q8N144 294 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 C11orf16Q9NQ32 467 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 TSPYL4Q9UJ04 414 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.44□□□□□ -1.06
TRA2B-216ENST00000493864 TNS2Q63HR2 1409 aa8.44□□□□□ -1.06
TRA2B-216ENST00000493864 ELL2O00472 640 aaPredicted RBP8.43□□□□□ -1.06
TRA2B-216ENST00000493864 RARAP10276 462 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 MAP2K3P46734 347 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 PCBP4P57723 403 aaKnown RBP8.43□□□□□ -1.06
TRA2B-216ENST00000493864 SLC39A6Q13433 755 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 KRT24Q2M2I5 525 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 SYT9Q86SS6 491 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 C8orf58Q8NAV2 365 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 ACSBG1Q96GR2 724 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 CITED4Q96RK1 184 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 RBCK1Q9BYM8 510 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 BABAM1Q9NWV8 329 aa8.43□□□□□ -1.06
TRA2B-216ENST00000493864 SRCAPQ6ZRS2 3230 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 SRSF11Q05519 484 aaKnown RBP8.42□□□□□ -1.06
TRA2B-216ENST00000493864 EHHADHQ08426 723 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 ZNF468Q5VIY5 522 aaPredicted RBP8.42□□□□□ -1.06
TRA2B-216ENST00000493864 TMC7Q7Z402 723 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 TSPYL6Q8N831 410 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 PIGBQ92521 554 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 ELP3Q9H9T3 547 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 ZFATQ9P243 1243 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 ADAMTS7Q9UKP4 1686 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 SCN11AQ9UI33 1791 aa8.42□□□□□ -1.06
TRA2B-216ENST00000493864 VIRMAQ69YN4 1812 aaKnown RBP8.41□□□□□ -1.06
TRA2B-216ENST00000493864 NUP188Q5SRE5 1749 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 KCNQ2O43526 872 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 VAMP4O75379 141 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 EIF4A1P60842 406 aaKnown RBP8.41□□□□□ -1.06
TRA2B-216ENST00000493864 PDE12Q6L8Q7 609 aaKnown RBP8.41□□□□□ -1.06
TRA2B-216ENST00000493864 ZSCAN29Q8IWY8 852 aaPredicted RBP8.41□□□□□ -1.06
TRA2B-216ENST00000493864 SYTL4Q96C24 671 aaPredicted RBP8.41□□□□□ -1.06
TRA2B-216ENST00000493864 FAM129BQ96TA1 746 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 IGFLR1Q9H665 355 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 TMOD3Q9NYL9 352 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 PODXL2Q9NZ53 605 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 TMEM63CQ9P1W3 806 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 RCAN3Q9UKA8 241 aa8.41□□□□□ -1.06
TRA2B-216ENST00000493864 RREB1Q92766 1687 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 TRIM37O94972 964 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 ARAFP10398 606 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 MFAP1P55081 439 aaKnown RBP8.4□□□□□ -1.06
TRA2B-216ENST00000493864 TBC1D8BQ0IIM8 1120 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 TWISTNBQ3B726 338 aaPredicted RBP8.4□□□□□ -1.06
TRA2B-216ENST00000493864 ZNF790Q6PG37 636 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 PTF1AQ7RTS3 328 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 EFCC1Q9HA90 598 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 ASAP1Q9ULH1 1129 aa8.4□□□□□ -1.06
TRA2B-216ENST00000493864 SUPT16HQ9Y5B9 1047 aaKnown RBP8.4□□□□□ -1.06
TRA2B-216ENST00000493864 BTAF1O14981 1849 aa8.4□□□□□ -1.07
TRA2B-216ENST00000493864 DOT1LQ8TEK3 1739 aa8.4□□□□□ -1.07
TRA2B-216ENST00000493864 NEURL1BA8MQ27 555 aa8.39□□□□□ -1.07
TRA2B-216ENST00000493864 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
TRA2B-216ENST00000493864 GPR182O15218 404 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms