RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 ZNF335Q9H4Z2 1342 aaPredicted RBP16.14■□□□□ 0.17
ZIC4-215ENST00000493664 FAM237AA0A1B0GTK4 181 aa16.14■□□□□ 0.17
ZIC4-215ENST00000493664 IRS4O14654 1257 aaPredicted RBP16.14■□□□□ 0.17
ZIC4-215ENST00000493664 SEC31AO94979 1220 aaKnown RBP16.14■□□□□ 0.17
ZIC4-215ENST00000493664 CTSWP56202 376 aa16.14■□□□□ 0.17
ZIC4-215ENST00000493664 MDM2Q00987 491 aaPredicted RBP16.14■□□□□ 0.17
ZIC4-215ENST00000493664 NKX1-1Q15270 411 aaPredicted RBP16.14■□□□□ 0.17
ZIC4-215ENST00000493664 TOGARAM2Q6ZUX3 1019 aa16.14■□□□□ 0.17
ZIC4-215ENST00000493664 IFNL3Q8IZI9 196 aa16.14■□□□□ 0.17
ZIC4-215ENST00000493664 WDR24Q96S15 920 aa16.14■□□□□ 0.17
ZIC4-215ENST00000493664 TTF1Q15361 905 aaPredicted RBP16.13■□□□□ 0.17
ZIC4-215ENST00000493664 DESI2Q9BSY9 194 aa16.13■□□□□ 0.17
ZIC4-215ENST00000493664 SEC31BQ9NQW1 1179 aa16.13■□□□□ 0.17
ZIC4-215ENST00000493664 TRMT112Q9UI30 125 aaKnown RBP16.13■□□□□ 0.17
ZIC4-215ENST00000493664 PCDHB6Q9Y5E3 794 aa16.13■□□□□ 0.17
ZIC4-215ENST00000493664 PNMA6AP0CW24 399 aaPredicted RBP16.13■□□□□ 0.17
ZIC4-215ENST00000493664 BMS1Q14692 1282 aaKnown RBP16.13■□□□□ 0.17
ZIC4-215ENST00000493664 GIGYF2Q6Y7W6 1299 aaKnown RBP16.13■□□□□ 0.17
ZIC4-215ENST00000493664 BAG1Q99933 345 aaPredicted RBP16.13■□□□□ 0.17
ZIC4-215ENST00000493664 ABCC12Q96J65 1359 aa16.13■□□□□ 0.17
ZIC4-215ENST00000493664 POSTNQ15063 836 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 SGMS1Q86VZ5 419 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 PIGBQ92521 554 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 SAMSN1Q9NSI8 373 aaKnown RBP16.12■□□□□ 0.17
ZIC4-215ENST00000493664 STRCP1A6NGW2 1772 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 GNG11P61952 73 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 MED15Q96RN5 788 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 MAP3K15Q6ZN16 1313 aa16.12■□□□□ 0.17
ZIC4-215ENST00000493664 VGLL3A8MV65 326 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 CCP110O43303 1012 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 MMP1P03956 469 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 NUP133Q8WUM0 1156 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 TNS2Q63HR2 1409 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 ARHGAP6O43182 974 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 TADA3O75528 432 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 FMNL1O95466 1100 aaPredicted RBP16.11■□□□□ 0.17
ZIC4-215ENST00000493664 PLA2G4AP47712 749 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 DHX8Q14562 1220 aaKnown RBP16.11■□□□□ 0.17
ZIC4-215ENST00000493664 TEX2Q8IWB9 1127 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 TC2NQ8N9U0 490 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 IRX2Q9BZI1 471 aaPredicted RBP16.11■□□□□ 0.17
ZIC4-215ENST00000493664 FBXO2Q9UK22 296 aaPredicted RBP16.11■□□□□ 0.17
ZIC4-215ENST00000493664 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
ZIC4-215ENST00000493664 CASP1P29466 404 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 MTF1Q14872 753 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 KARSQ15046 597 aaKnown RBP16.11■□□□□ 0.17
ZIC4-215ENST00000493664 CADPS2Q86UW7 1296 aa16.11■□□□□ 0.17
ZIC4-215ENST00000493664 SMIM22K7EJ46 135 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 ZSCAN12O43309 604 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 ATRNO75882 1429 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 RASGRF1Q13972 1273 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 FAM205CA6NFA0 338 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 LIFRP42702 1097 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 TBX2Q13207 712 aaPredicted RBP16.1■□□□□ 0.17
ZIC4-215ENST00000493664 SAFBQ15424 915 aaKnown RBP eCLIP16.1■□□□□ 0.17
ZIC4-215ENST00000493664 TMCO3Q6UWJ1 677 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 MFSD6Q6ZSS7 791 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 MIGA1Q8NAN2 632 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 SPATA5Q8NB90 893 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 SMARCE1Q969G3 411 aa16.1■□□□□ 0.17
ZIC4-215ENST00000493664 NOL10Q9BSC4 688 aaKnown RBP16.1■□□□□ 0.17
ZIC4-215ENST00000493664 PLEKHG2Q9H7P9 1386 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 hCG_1642624A0A1W2PR95 340 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 GSG1L2A8MUP6 293 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 TUBB4AP04350 444 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 IFNAR1P17181 557 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 PTPREP23469 700 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 RTN1Q16799 776 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 AKNAD1Q5T1N1 836 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 SPECC1LQ69YQ0 1117 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 ZBTB9Q96C00 473 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 CABP5Q9NP86 173 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 POLR3GO15318 223 aaPredicted RBP16.09■□□□□ 0.17
ZIC4-215ENST00000493664 STARD3NLO95772 234 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 ARID4AP29374 1257 aaPredicted RBP16.09■□□□□ 0.17
ZIC4-215ENST00000493664 TDO2P48775 406 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 EVA1CP58658 441 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 KLHL10Q6JEL2 608 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 LCORLQ8N3X6 602 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 PAPPAQ13219 1627 aa16.09■□□□□ 0.17
ZIC4-215ENST00000493664 COL5A2P05997 1499 aaPredicted RBP16.09■□□□□ 0.17
ZIC4-215ENST00000493664 A0A0U1RQJ8 604 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 ZRANB2O95218 330 aaKnown RBP eCLIP16.08■□□□□ 0.17
ZIC4-215ENST00000493664 ZNF18P17022 549 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 CASQ1P31415 396 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 STX17P56962 302 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 TEX35Q5T0J7 233 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 CPLX3Q8WVH0 158 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 ATRIPQ8WXE1 791 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 ZNF512BQ96KM6 892 aaPredicted RBP16.08■□□□□ 0.17
ZIC4-215ENST00000493664 ZBTB1Q9Y2K1 713 aa16.08■□□□□ 0.17
ZIC4-215ENST00000493664 TEX33O43247 280 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 AFMP43652 599 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 CSRNP2Q9H175 543 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 ZSWIM4Q9H7M6 989 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 CDHR2Q9BYE9 1310 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 WTAPQ15007 396 aa16.08■□□□□ 0.16
ZIC4-215ENST00000493664 PUM3Q15397 648 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms