RNA–Protein interactions for RNA: ENST00000493564.1

SGIP1-213, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-213ENST00000493564 IGSF3O75054 1194 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 PTPRAP18433 802 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 PPIL2Q13356 520 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 SNAPC2Q13487 334 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 SHROOM1Q2M3G4 852 aaPredicted RBP11.42□□□□□ -0.58
SGIP1-213ENST00000493564 NOL9Q5SY16 702 aaKnown RBP11.42□□□□□ -0.58
SGIP1-213ENST00000493564 OTUD7BQ6GQQ9 843 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 SCYL3Q8IZE3 742 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 FAM43AQ8N2R8 423 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 LCORLQ8N3X6 602 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 CRACR2BQ8N4Y2 399 aaPredicted RBP11.42□□□□□ -0.58
SGIP1-213ENST00000493564 SDR42E1Q8WUS8 393 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 ZNF296Q8WUU4 475 aaPredicted RBP11.42□□□□□ -0.58
SGIP1-213ENST00000493564 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 TRIM34Q9BYJ4 488 aa11.42□□□□□ -0.58
SGIP1-213ENST00000493564 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.42□□□□□ -0.58
SGIP1-213ENST00000493564 DHX36Q9H2U1 1008 aaKnown RBP11.42□□□□□ -0.58
SGIP1-213ENST00000493564 BTBD19C9JJ37 291 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 MBD4O95243 580 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 CETPP11597 493 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 JAG1P78504 1218 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 EVX2Q03828 476 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 CRHR2Q13324 411 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 DGKZQ13574 1117 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 IFFO2Q5TF58 517 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 FOXP4Q8IVH2 680 aaPredicted RBP11.41□□□□□ -0.58
SGIP1-213ENST00000493564 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 LNPKQ9C0E8 428 aa11.41□□□□□ -0.58
SGIP1-213ENST00000493564 PUS7LQ9H0K6 701 aaKnown RBP11.41□□□□□ -0.58
SGIP1-213ENST00000493564 TRIM75PA6NK02 468 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 ECM2O94769 699 aaPredicted RBP11.4□□□□□ -0.58
SGIP1-213ENST00000493564 GDF11O95390 407 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 POLR3DP05423 398 aaPredicted RBP11.4□□□□□ -0.58
SGIP1-213ENST00000493564 HLA-DOAP06340 250 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 CYP2D6P10635 497 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 MX1P20591 662 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 PLCD1P51178 756 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 AAMPQ13685 434 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 UBE3CQ15386 1083 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 CERS3Q8IU89 383 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 CRNKL1Q9BZJ0 848 aaKnown RBP11.4□□□□□ -0.58
SGIP1-213ENST00000493564 MCOLN1Q9GZU1 580 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 DNAJC18Q9H819 358 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 MCM9Q9NXL9 1143 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 HERC5Q9UII4 1024 aaKnown RBP11.4□□□□□ -0.58
SGIP1-213ENST00000493564 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
SGIP1-213ENST00000493564 TTC41PQ6P2S7 1318 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 MAST2Q6P0Q8 1798 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 ERC2O15083 957 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 RNF113AO15541 343 aaKnown RBP11.39□□□□□ -0.59
SGIP1-213ENST00000493564 FKTNO75072 461 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 CAP2P40123 477 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 SPP2Q13103 211 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 TAF1CQ15572 869 aaPredicted RBP11.39□□□□□ -0.59
SGIP1-213ENST00000493564 TMED8Q6PL24 325 aaPredicted RBP11.39□□□□□ -0.59
SGIP1-213ENST00000493564 GADL1Q6ZQY3 521 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 KBTBD3Q8NAB2 608 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 KCNH4Q9UQ05 1017 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 SLC4A4Q9Y6R1 1079 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 DOCK2Q92608 1830 aa11.39□□□□□ -0.59
SGIP1-213ENST00000493564 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 SMIM22K7EJ46 135 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 PDHXO00330 501 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 CXCL11O14625 94 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 GLRX3O76003 335 aaKnown RBP11.38□□□□□ -0.59
SGIP1-213ENST00000493564 PDE1AP54750 535 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 MOGSQ13724 837 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 TTC6Q86TZ1 520 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 METTL16Q86W50 562 aaKnown RBP11.38□□□□□ -0.59
SGIP1-213ENST00000493564 SMC5Q8IY18 1101 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 OSBP2Q969R2 916 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 ABHD8Q96I13 439 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 CFHR5Q9BXR6 569 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 ZFYVE28Q9HCC9 887 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 DCP1AQ9NPI6 582 aaPredicted RBP11.38□□□□□ -0.59
SGIP1-213ENST00000493564 CDK5RAP2Q96SN8 1893 aa11.38□□□□□ -0.59
SGIP1-213ENST00000493564 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
SGIP1-213ENST00000493564 SALL3Q9BXA9 1300 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 A0A0G2JLL6 359 aaPredicted RBP11.37□□□□□ -0.59
SGIP1-213ENST00000493564 USP17L5A8MUK1 530 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 M0R2C6 588 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 GPAT2Q6NUI2 795 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 PRRT2Q7Z6L0 340 aaPredicted RBP11.37□□□□□ -0.59
SGIP1-213ENST00000493564 CTU1Q7Z7A3 348 aaKnown RBP11.37□□□□□ -0.59
SGIP1-213ENST00000493564 CHD1LQ86WJ1 897 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 STK11IPQ8N1F8 1099 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 ZNF280CQ8ND82 737 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 CD99L2Q8TCZ2 262 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 DYNLL2Q96FJ2 89 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
SGIP1-213ENST00000493564 SEC62Q99442 399 aaKnown RBP11.37□□□□□ -0.59
SGIP1-213ENST00000493564 FSD1Q9BTV5 496 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 SERPINB13Q9UIV8 391 aa11.37□□□□□ -0.59
SGIP1-213ENST00000493564 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 USP17L21D6R901 530 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 GH2P01242 217 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 CYP2C8P10632 490 aa11.36□□□□□ -0.59
SGIP1-213ENST00000493564 CAP1Q01518 475 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms