RNA–Protein interactions for RNA: ENST00000493359.1

NCKAP1-207, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 615 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-207ENST00000493359 ERVK-9P63128 1117 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 DHX9Q08211 1270 aaKnown RBP8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 TFCP2Q12800 502 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 TRAPPC3LQ5T215 181 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 SUSD4Q5VX71 490 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 USPL1Q5W0Q7 1092 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 TSHZ3Q63HK5 1081 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 BICDL1Q6ZP65 573 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 LIAT1Q6ZQX7 453 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 TNS4Q8IZW8 715 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 TAF1LQ8IZX4 1826 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 COL26A1Q96A83 441 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 ASB16Q96NS5 453 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 PURBQ96QR8 312 aaKnown RBP8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 USP42Q9H9J4 1324 aaKnown RBP8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 CYLDQ9NQC7 956 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 SERTAD1Q9UHV2 236 aa8.16□□□□□ -1.1
NCKAP1-207ENST00000493359 ZNF609O15014 1411 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 FAM13AO94988 1023 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 NTSR2O95665 410 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 CSF1RP07333 972 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 ITGA6P23229 1130 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 FSHRP23945 695 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 SLC19A1P41440 591 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 CCDC152Q4G0S7 254 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 TNNI3KQ59H18 835 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 HELQQ8TDG4 1101 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 SETDB2Q96T68 719 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 CCDC8Q9H0W5 538 aaPredicted RBP8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 GPR108Q9NPR9 543 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 CNNM1Q9NRU3 951 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 AKAP2Q9Y2D5 859 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 FPGT-TNNI3KV9GXZ4 949 aa8.15□□□□□ -1.1
NCKAP1-207ENST00000493359 KAT6BQ8WYB5 2073 aa8.15□□□□□ -1.11
NCKAP1-207ENST00000493359 C4AP0C0L4 1744 aa8.15□□□□□ -1.11
NCKAP1-207ENST00000493359 COL24A1Q17RW2 1714 aa8.15□□□□□ -1.11
NCKAP1-207ENST00000493359 LRP5O75197 1615 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 CARMIL3Q8ND23 1372 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 REC8O95072 547 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 APBA3O96018 575 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 HCLS1P14317 486 aaPredicted RBP8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 SKOR1P84550 965 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 TXNRD1Q16881 649 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 NBPF5PQ86XG9 351 aaPredicted RBP8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 TTLL11Q8NHH1 800 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 PI4K2BQ8TCG2 481 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 EAF2Q96CJ1 260 aaPredicted RBP8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 TBC1D32Q96NH3 1257 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 C22orf23Q9BZE7 217 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 IRX2Q9BZI1 471 aaPredicted RBP8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 GREM2Q9H772 168 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 TMPRSS4Q9NRS4 437 aa8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 SRP68Q9UHB9 627 aaKnown RBP8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 V9GY48 417 aaPredicted RBP8.14□□□□□ -1.11
NCKAP1-207ENST00000493359 MYH14Q7Z406 1995 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 RTL9Q8NET4 1388 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 RGPD4Q7Z3J3 1758 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 DDX60Q8IY21 1712 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 TNS1Q9HBL0 1735 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 HIP1O00291 1037 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 STAU1O95793 577 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 MAP4K4O95819 1239 aaPredicted RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 INHAP05111 366 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 IGHMBP2P38935 993 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 ARHGAP4P98171 946 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 BECN1Q14457 450 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 METTL24Q5JXM2 366 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 GORABQ5T7V8 394 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 TBC1D9BQ66K14 1250 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 LDHAL6AQ6ZMR3 332 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 ATG9AQ7Z3C6 839 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 SYNE4Q8N205 404 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 NEUROD6Q96NK8 337 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 IPO9Q96P70 1041 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 MPHOSPH8Q99549 860 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 DIAPH3Q9NSV4 1193 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 TLR7Q9NYK1 1049 aaKnown RBP8.13□□□□□ -1.11
NCKAP1-207ENST00000493359 RIC1Q4ADV7 1423 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 MROH5Q6ZUA9 1318 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 MYH3P11055 1940 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 A0A1B0GUL7 405 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 PLSCR1O15162 318 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 CD2BP2O95400 341 aaKnown RBP8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 MCCP23508 829 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 SCNN1DP51172 638 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 LRRC24Q50LG9 513 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 TTC39AQ5SRH9 613 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 SMIM5Q71RC9 77 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 CYP2U1Q7Z449 544 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 RUFY2Q8WXA3 655 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 EVI5LQ96CN4 794 aa8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 CDC5LQ99459 802 aaKnown RBP8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 PUS3Q9BZE2 481 aaKnown RBP8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 TSPAN10Q9H1Z9 355 aaPredicted RBP8.12□□□□□ -1.11
NCKAP1-207ENST00000493359 ABCC12Q96J65 1359 aa8.11□□□□□ -1.11
NCKAP1-207ENST00000493359 TUBGCP6Q96RT7 1819 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms