RNA–Protein interactions for RNA: ENST00000493256.1

LYSMD4-208, Transcript of LysM domain containing 4, humanhuman

TSL 3

Gene LYSMD4, Length 880 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-208ENST00000493256 ADGRA1Q86SQ6 560 aa27.14■■□□□ 1.94
LYSMD4-208ENST00000493256 PIH1D3Q9NQM4 214 aaKnown RBP27.14■■□□□ 1.94
LYSMD4-208ENST00000493256 BAG3O95817 575 aa27.13■■□□□ 1.93
LYSMD4-208ENST00000493256 BCRP11274 1271 aa27.13■■□□□ 1.93
LYSMD4-208ENST00000493256 PRMT2P55345 433 aa27.13■■□□□ 1.93
LYSMD4-208ENST00000493256 SH3TC2Q8TF17 1288 aa27.13■■□□□ 1.93
LYSMD4-208ENST00000493256 CDK5RAP2Q96SN8 1893 aa27.13■■□□□ 1.93
LYSMD4-208ENST00000493256 PPP4CP60510 307 aa27.12■■□□□ 1.93
LYSMD4-208ENST00000493256 TMEM106CQ9BVX2 250 aa27.12■■□□□ 1.93
LYSMD4-208ENST00000493256 SRRDQ9UH36 339 aa27.12■■□□□ 1.93
LYSMD4-208ENST00000493256 EXOC6BQ9Y2D4 811 aa27.12■■□□□ 1.93
LYSMD4-208ENST00000493256 SLC45A1Q9Y2W3 748 aa27.12■■□□□ 1.93
LYSMD4-208ENST00000493256 SIPA1L1O43166 1804 aa27.11■■□□□ 1.93
LYSMD4-208ENST00000493256 ATAD5Q96QE3 1844 aa27.11■■□□□ 1.93
LYSMD4-208ENST00000493256 FMNL1O95466 1100 aaPredicted RBP27.11■■□□□ 1.93
LYSMD4-208ENST00000493256 PLCG2P16885 1265 aa27.11■■□□□ 1.93
LYSMD4-208ENST00000493256 OSBPP22059 807 aa27.11■■□□□ 1.93
LYSMD4-208ENST00000493256 RRP1BQ14684 758 aaKnown RBP27.11■■□□□ 1.93
LYSMD4-208ENST00000493256 MYCP01106 439 aaPredicted RBP27.1■■□□□ 1.93
LYSMD4-208ENST00000493256 MAPKAPK5Q8IW41 473 aa27.1■■□□□ 1.93
LYSMD4-208ENST00000493256 TGFBRAP1Q8WUH2 860 aa27.1■■□□□ 1.93
LYSMD4-208ENST00000493256 HERC5Q9UII4 1024 aaKnown RBP27.1■■□□□ 1.93
LYSMD4-208ENST00000493256 FOCADQ5VW36 1801 aa27.1■■□□□ 1.93
LYSMD4-208ENST00000493256 IGSF3O75054 1194 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 SLC34A2O95436 690 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 CAP2P40123 477 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 ERC1Q8IUD2 1116 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 DHX36Q9H2U1 1008 aaKnown RBP27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 PI4KBQ9UBF8 816 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 AGTPBP1Q9UPW5 1226 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 FLT1P17948 1338 aa27.09■■□□□ 1.93
LYSMD4-208ENST00000493256 MGAMO43451 1857 aa27.08■■□□□ 1.93
LYSMD4-208ENST00000493256 HOXD10P28358 340 aa27.08■■□□□ 1.93
LYSMD4-208ENST00000493256 SLC4A8Q2Y0W8 1093 aa27.08■■□□□ 1.93
LYSMD4-208ENST00000493256 MS4A1P11836 297 aa27.07■■□□□ 1.92
LYSMD4-208ENST00000493256 SPP2Q13103 211 aa27.07■■□□□ 1.92
LYSMD4-208ENST00000493256 TREML2Q5T2D2 321 aa27.07■■□□□ 1.92
LYSMD4-208ENST00000493256 AACSQ86V21 672 aa27.07■■□□□ 1.92
LYSMD4-208ENST00000493256 NDUFB9Q9Y6M9 179 aa27.07■■□□□ 1.92
LYSMD4-208ENST00000493256 MYPNQ86TC9 1320 aa27.07■■□□□ 1.92
LYSMD4-208ENST00000493256 IDH1O75874 414 aaKnown RBP27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 CYP7A1P22680 504 aa27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 FCGRTP55899 365 aa27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 DYNLL1P63167 89 aaKnown RBP27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 ZNF280CQ8ND82 737 aa27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 RAET1EQ8TD07 263 aa27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 LOC285556D6RIA3 1793 aa27.06■■□□□ 1.92
LYSMD4-208ENST00000493256 PROCA1Q8NCQ7 364 aaPredicted RBP27.05■■□□□ 1.92
LYSMD4-208ENST00000493256 SMCR8Q8TEV9 937 aaPredicted RBP27.05■■□□□ 1.92
LYSMD4-208ENST00000493256 TBC1D2Q9BYX2 928 aa27.05■■□□□ 1.92
LYSMD4-208ENST00000493256 DNAJC18Q9H819 358 aa27.05■■□□□ 1.92
LYSMD4-208ENST00000493256 USP17L5A8MUK1 530 aa27.04■■□□□ 1.92
LYSMD4-208ENST00000493256 PRKCZQ05513 592 aa27.04■■□□□ 1.92
LYSMD4-208ENST00000493256 METTL16Q86W50 562 aaKnown RBP27.04■■□□□ 1.92
LYSMD4-208ENST00000493256 ANTXR1Q9H6X2 564 aa27.04■■□□□ 1.92
LYSMD4-208ENST00000493256 IL1RAPL2Q9NP60 686 aa27.04■■□□□ 1.92
LYSMD4-208ENST00000493256 PALD1Q9ULE6 856 aa27.04■■□□□ 1.92
LYSMD4-208ENST00000493256 GRK4P32298 578 aa27.03■■□□□ 1.92
LYSMD4-208ENST00000493256 HMGCS2P54868 508 aa27.03■■□□□ 1.92
LYSMD4-208ENST00000493256 HSP90AB4PQ58FF6 505 aa27.03■■□□□ 1.92
LYSMD4-208ENST00000493256 RHPN1Q8TCX5 695 aa27.03■■□□□ 1.92
LYSMD4-208ENST00000493256 SAP30BPQ9UHR5 308 aaKnown RBP27.03■■□□□ 1.92
LYSMD4-208ENST00000493256 COG6Q9Y2V7 657 aa27.03■■□□□ 1.92
LYSMD4-208ENST00000493256 JAG1P78504 1218 aa27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 MTFR1Q15390 333 aa27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 FOXP4Q8IVH2 680 aaPredicted RBP27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 MAGEB6Q8N7X4 407 aa27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 MIGA1Q8NAN2 632 aa27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 PNMA3Q9UL41 463 aa27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 GABRQQ9UN88 632 aa27.02■■□□□ 1.92
LYSMD4-208ENST00000493256 CRACR2BQ8N4Y2 399 aaPredicted RBP27.01■■□□□ 1.91
LYSMD4-208ENST00000493256 ZBTB40Q9NUA8 1239 aa27.01■■□□□ 1.91
LYSMD4-208ENST00000493256 DDX19BQ9UMR2 479 aa27.01■■□□□ 1.91
LYSMD4-208ENST00000493256 SHROOM1Q2M3G4 852 aaPredicted RBP27■■□□□ 1.91
LYSMD4-208ENST00000493256 SH3D19Q5HYK7 790 aa27■■□□□ 1.91
LYSMD4-208ENST00000493256 SIRT2Q8IXJ6 389 aa27■■□□□ 1.91
LYSMD4-208ENST00000493256 RPAP2Q8IXW5 612 aaPredicted RBP27■■□□□ 1.91
LYSMD4-208ENST00000493256 ANKRD13CQ8N6S4 541 aa27■■□□□ 1.91
LYSMD4-208ENST00000493256 TRIM34Q9BYJ4 488 aa27■■□□□ 1.91
LYSMD4-208ENST00000493256 AS3MTQ9HBK9 375 aa27■■□□□ 1.91
LYSMD4-208ENST00000493256 MYH1P12882 1939 aa26.99■■□□□ 1.91
LYSMD4-208ENST00000493256 APBB1O00213 710 aa26.99■■□□□ 1.91
LYSMD4-208ENST00000493256 ASNSP08243 561 aa26.99■■□□□ 1.91
LYSMD4-208ENST00000493256 MAP3K12Q12852 859 aa26.99■■□□□ 1.91
LYSMD4-208ENST00000493256 WDR18Q9BV38 432 aa26.99■■□□□ 1.91
LYSMD4-208ENST00000493256 GDF11O95390 407 aa26.98■■□□□ 1.91
LYSMD4-208ENST00000493256 HLA-DOAP06340 250 aa26.98■■□□□ 1.91
LYSMD4-208ENST00000493256 MTMR2Q13614 643 aa26.98■■□□□ 1.91
LYSMD4-208ENST00000493256 CERS3Q8IU89 383 aa26.98■■□□□ 1.91
LYSMD4-208ENST00000493256 RCAN3Q9UKA8 241 aa26.98■■□□□ 1.91
LYSMD4-208ENST00000493256 DOCK3Q8IZD9 2030 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 TNPO2O14787 897 aaKnown RBP26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 HMMRO75330 724 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 USP5P45974 858 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 FLT3LGP49771 235 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 PABPC4Q13310 644 aaKnown RBP eCLIP26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 FAM110CQ1W6H9 321 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 SLAIN1Q8ND83 568 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 KIF1BPQ96EK5 621 aa26.97■■□□□ 1.91
LYSMD4-208ENST00000493256 ASCC2Q9H1I8 757 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms