RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SOX1O00570 391 aaPredicted RBP13.62□□□□□ -0.23
SND1-215ENST00000492772 RHBDL3P58872 404 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 GSTO1P78417 241 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 MECOMQ03112 1051 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 SLFN5Q08AF3 891 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 CCDC84Q86UT8 332 aaPredicted RBP13.62□□□□□ -0.23
SND1-215ENST00000492772 ZNF280CQ8ND82 737 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 API5Q9BZZ5 524 aaKnown RBP13.62□□□□□ -0.23
SND1-215ENST00000492772 STAP2Q9UGK3 403 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 LAMA3Q16787 3333 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 PLXNB2O15031 1838 aa13.62□□□□□ -0.23
SND1-215ENST00000492772 LDHCP07864 332 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 CT47B1P0C2W7 299 aaPredicted RBP13.61□□□□□ -0.23
SND1-215ENST00000492772 SLURP2P0DP57 97 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 BMP8BP34820 402 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 SPP2Q13103 211 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 GPR153Q6NV75 609 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 C7orf61Q8IZ16 206 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 DIS3LQ8TF46 1054 aaKnown RBP13.61□□□□□ -0.23
SND1-215ENST00000492772 XAGE2Q96GT9 111 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 AS3MTQ9HBK9 375 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 HMX1Q9NP08 348 aaPredicted RBP13.61□□□□□ -0.23
SND1-215ENST00000492772 RPTORQ8N122 1335 aa13.61□□□□□ -0.23
SND1-215ENST00000492772 SIPA1L1O43166 1804 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 COL6A3P12111 3177 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 USP17L5A8MUK1 530 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 DLL1O00548 723 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 HMGCS2P54868 508 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 TIMM10P62072 90 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 SH3D19Q5HYK7 790 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 LRCH3Q96II8 777 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 GDF15Q99988 308 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 NBPF3Q9H094 633 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 ASCC2Q9H1I8 757 aaPredicted RBP13.6□□□□□ -0.23
SND1-215ENST00000492772 HERC5Q9UII4 1024 aaKnown RBP13.6□□□□□ -0.23
SND1-215ENST00000492772 FOCADQ5VW36 1801 aa13.6□□□□□ -0.23
SND1-215ENST00000492772 CAP2P40123 477 aa13.59□□□□□ -0.23
SND1-215ENST00000492772 TFCP2Q12800 502 aa13.59□□□□□ -0.23
SND1-215ENST00000492772 ZNF384Q8TF68 577 aa13.59□□□□□ -0.23
SND1-215ENST00000492772 NSUN4Q96CB9 384 aaKnown RBP13.59□□□□□ -0.23
SND1-215ENST00000492772 MEIS3Q99687 375 aa13.59□□□□□ -0.23
SND1-215ENST00000492772 MORF4L1Q9UBU8 362 aa13.59□□□□□ -0.23
SND1-215ENST00000492772 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
SND1-215ENST00000492772 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
SND1-215ENST00000492772 ZNF316A6NFI3 1004 aaPredicted RBP13.58□□□□□ -0.24
SND1-215ENST00000492772 SRGAP3O43295 1099 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 GNAI3P08754 354 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 IRX3P78415 501 aaPredicted RBP13.58□□□□□ -0.24
SND1-215ENST00000492772 MTX1Q13505 466 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 GORABQ5T7V8 394 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 TEX11Q8IYF3 940 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 SPATA5Q8NB90 893 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 SOCS4Q8WXH5 440 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 NOL10Q9BSC4 688 aaKnown RBP13.58□□□□□ -0.24
SND1-215ENST00000492772 C11orf49Q9H6J7 331 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 RAI14Q9P0K7 980 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 CDK5RAP2Q96SN8 1893 aa13.58□□□□□ -0.24
SND1-215ENST00000492772 ARID4AP29374 1257 aaPredicted RBP13.57□□□□□ -0.24
SND1-215ENST00000492772 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
SND1-215ENST00000492772 TRIB2Q92519 343 aa13.57□□□□□ -0.24
SND1-215ENST00000492772 NEUROD6Q96NK8 337 aa13.57□□□□□ -0.24
SND1-215ENST00000492772 WDR18Q9BV38 432 aa13.57□□□□□ -0.24
SND1-215ENST00000492772 DHX36Q9H2U1 1008 aaKnown RBP13.57□□□□□ -0.24
SND1-215ENST00000492772 TMOD4Q9NZQ9 345 aa13.57□□□□□ -0.24
SND1-215ENST00000492772 OGDHLQ9ULD0 1010 aa13.57□□□□□ -0.24
SND1-215ENST00000492772 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
SND1-215ENST00000492772 FRMPD3Q5JV73 1810 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 ASNSP08243 561 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 XRCC5P13010 732 aaKnown RBP13.56□□□□□ -0.24
SND1-215ENST00000492772 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
SND1-215ENST00000492772 MNX1P50219 401 aaPredicted RBP13.56□□□□□ -0.24
SND1-215ENST00000492772 TRIM32Q13049 653 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 MTMR2Q13614 643 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 PDE3AQ14432 1141 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 LRIT3Q3SXY7 679 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 PI16Q6UXB8 463 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 NUDT12Q9BQG2 462 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 PI4KBQ9UBF8 816 aa13.56□□□□□ -0.24
SND1-215ENST00000492772 UQCRFS1P1P0C7P4 283 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 PLCG2P16885 1265 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 ZKSCAN1P17029 563 aaPredicted RBP13.55□□□□□ -0.24
SND1-215ENST00000492772 MAPK4P31152 587 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 HOXA7P31268 230 aaPredicted RBP13.55□□□□□ -0.24
SND1-215ENST00000492772 MAGEA10P43363 369 aaPredicted RBP13.55□□□□□ -0.24
SND1-215ENST00000492772 BACE1P56817 501 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 HERVK_113P62684 666 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 RRP1BQ14684 758 aaKnown RBP13.55□□□□□ -0.24
SND1-215ENST00000492772 TBC1D9Q6ZT07 1266 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 TRMT2AQ8IZ69 625 aaKnown RBP13.55□□□□□ -0.24
SND1-215ENST00000492772 TDHQ8IZJ6 230 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 DEFB123Q8N688 67 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 GPRC5AQ8NFJ5 357 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 GTF3C2Q8WUA4 911 aaPredicted RBP13.55□□□□□ -0.24
SND1-215ENST00000492772 CDCA7LQ96GN5 454 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 GINM1Q9NU53 330 aa13.55□□□□□ -0.24
SND1-215ENST00000492772 LRP2BPQ9P2M1 347 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms