RNA–Protein interactions for RNA: ENST00000492723.1

TOM1-216, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-216ENST00000492723 TRIM22Q8IYM9 498 aa19.43■□□□□ 0.7
TOM1-216ENST00000492723 CMTR1Q8N1G2 835 aaKnown RBP19.43■□□□□ 0.7
TOM1-216ENST00000492723 FGRP09769 529 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 CYP2D6P10635 497 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 IQCA1Q86XH1 822 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 WASF1Q92558 559 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 HOXA10P31260 410 aaPredicted RBP19.42■□□□□ 0.7
TOM1-216ENST00000492723 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 RCAN1P53805 252 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 RBM6P78332 1123 aaKnown RBP19.42■□□□□ 0.7
TOM1-216ENST00000492723 GRIK5Q16478 980 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 RBM43Q6ZSC3 357 aaKnown RBP19.42■□□□□ 0.7
TOM1-216ENST00000492723 FSIP1Q8NA03 581 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 ARPP21Q9UBL0 812 aaPredicted RBP19.42■□□□□ 0.7
TOM1-216ENST00000492723 USP25Q9UHP3 1055 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 MYH2Q9UKX2 1941 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 ECM29Q5VYK3 1845 aa19.42■□□□□ 0.7
TOM1-216ENST00000492723 YEATS4O95619 227 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 DIXDC1Q155Q3 683 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 ZNF827Q17R98 1081 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 IFIT1BQ5T764 474 aaKnown RBP19.41■□□□□ 0.7
TOM1-216ENST00000492723 KCNG4Q8TDN1 519 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 SLC3A2P08195 630 aaKnown RBP19.41■□□□□ 0.7
TOM1-216ENST00000492723 HMGB2P26583 209 aaKnown RBP19.41■□□□□ 0.7
TOM1-216ENST00000492723 GSTO1P78417 241 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 ANO1Q5XXA6 986 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 CD209Q9NNX6 404 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 MCM9Q9NXL9 1143 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 MRVI1Q9Y6F6 885 aa19.41■□□□□ 0.7
TOM1-216ENST00000492723 SPTLC2O15270 562 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 FAM160A1Q05DH4 1040 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 ADALQ6DHV7 355 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 CRACR2BQ8N4Y2 399 aaPredicted RBP19.4■□□□□ 0.7
TOM1-216ENST00000492723 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.4■□□□□ 0.72e-8■■■■■ 48.1
TOM1-216ENST00000492723 APBA3O96018 575 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 USP5P45974 858 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 SNW1Q13573 536 aaKnown RBP19.4■□□□□ 0.7
TOM1-216ENST00000492723 SBK1Q52WX2 424 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 NBPF11Q86T75 865 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 CRAMP1Q96RY5 1269 aa19.4■□□□□ 0.7
TOM1-216ENST00000492723 ORC4O43929 436 aa19.39■□□□□ 0.7
TOM1-216ENST00000492723 KINO60870 393 aaKnown RBP19.39■□□□□ 0.7
TOM1-216ENST00000492723 SASS6Q6UVJ0 657 aa19.39■□□□□ 0.7
TOM1-216ENST00000492723 CATIPQ7Z7H3 387 aa19.39■□□□□ 0.7
TOM1-216ENST00000492723 SH3RF3Q8TEJ3 882 aaPredicted RBP19.39■□□□□ 0.7
TOM1-216ENST00000492723 MRPS27Q92552 414 aaKnown RBP19.39■□□□□ 0.7
TOM1-216ENST00000492723 USP17L8P0C7I0 530 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 FAM47AQ5JRC9 791 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 ZNF772Q68DY9 489 aaPredicted RBP19.39■□□□□ 0.69
TOM1-216ENST00000492723 TBC1D16Q8TBP0 767 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 POLLQ9UGP5 575 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 KLRG2A4D1S0 409 aaPredicted RBP19.39■□□□□ 0.69
TOM1-216ENST00000492723 C6orf229H3BNL8 230 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 IGSF3O75054 1194 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 DEXIO95424 95 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 BAG3O95817 575 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 U2AF2P26368 475 aaKnown RBP eCLIP19.39■□□□□ 0.69
TOM1-216ENST00000492723 PDE4BQ07343 736 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 ENGASEQ8NFI3 743 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 NOL10Q9BSC4 688 aaKnown RBP19.39■□□□□ 0.69
TOM1-216ENST00000492723 PODXL2Q9NZ53 605 aa19.39■□□□□ 0.69
TOM1-216ENST00000492723 A0A1W2PQ27 194 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 A0A1W2PQ64 194 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 A0A1W2PQD8 194 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 ANO6Q4KMQ2 910 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 HS1BP3Q53T59 392 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 COL23A1Q86Y22 540 aaPredicted RBP19.38■□□□□ 0.69
TOM1-216ENST00000492723 FAM200AQ8TCP9 573 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.38■□□□□ 0.69
TOM1-216ENST00000492723 A0A1B0GVL5 298 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 IL1R1P14778 569 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 PLCB2Q00722 1185 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 PPP2R5BQ15173 497 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 KCNJ14Q9UNX9 436 aa19.38■□□□□ 0.69
TOM1-216ENST00000492723 LAMB1P07942 1786 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 PPEF1O14829 653 aaPredicted RBP19.37■□□□□ 0.69
TOM1-216ENST00000492723 PLSCR1O15162 318 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 NMT2O60551 498 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 LDHCP07864 332 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 SAFBQ15424 915 aaKnown RBP eCLIP19.37■□□□□ 0.69
TOM1-216ENST00000492723 ZSCAN30Q86W11 494 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 NLGN1Q8N2Q7 840 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 CTAGE5O15320 804 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 MMP1P03956 469 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 AKT1S1Q96B36 256 aa19.37■□□□□ 0.69
TOM1-216ENST00000492723 KIAA1551Q9HCM1 1747 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 MROH7-TTC4A0A0A0MT08 1334 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.36■□□□□ 0.69
TOM1-216ENST00000492723 ADCY5O95622 1261 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 SLC39A14Q15043 492 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 MKRN1Q9UHC7 482 aaKnown RBP19.36■□□□□ 0.69
TOM1-216ENST00000492723 TSPY2A6NKD2 308 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 PTMAP06454 111 aaKnown RBP19.36■□□□□ 0.69
TOM1-216ENST00000492723 MARCKSP29966 332 aaPredicted RBP19.36■□□□□ 0.69
TOM1-216ENST00000492723 CLCN1P35523 988 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 NDUFA8P51970 172 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 AKAP17AQ02040 695 aaKnown RBP19.36■□□□□ 0.69
TOM1-216ENST00000492723 C12orf60Q5U649 245 aa19.36■□□□□ 0.69
TOM1-216ENST00000492723 DIS3L2Q8IYB7 885 aaKnown RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms