RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 ALG13Q9NP73 1137 aaKnown RBP5.8□□□□□ -1.48
UBR4-215ENST00000492606 RIC1Q4ADV7 1423 aa5.8□□□□□ -1.48
UBR4-215ENST00000492606 EP300Q09472 2414 aaPredicted RBP5.79□□□□□ -1.48
UBR4-215ENST00000492606 ABCA12Q86UK0 2595 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 YDJCA8MPS7 323 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 FBLN1P23142 703 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 HOXC9P31274 260 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 EIF5P55010 431 aaKnown RBP5.79□□□□□ -1.48
UBR4-215ENST00000492606 TCIRG1Q13488 830 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 NCOA4Q13772 614 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 AAK1Q2M2I8 961 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 PLPP7Q8NBV4 271 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 ARHGAP9Q9BRR9 750 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 C1QTNF2Q9BXJ5 285 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 GZF1Q9H116 711 aaPredicted RBP5.79□□□□□ -1.48
UBR4-215ENST00000492606 BIN2Q9UBW5 565 aaPredicted RBP5.79□□□□□ -1.48
UBR4-215ENST00000492606 PCDHB9Q9Y5E1 797 aa5.79□□□□□ -1.48
UBR4-215ENST00000492606 SMG1Q96Q15 3661 aaKnown RBP5.78□□□□□ -1.48
UBR4-215ENST00000492606 PFASO15067 1338 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 PRR23AA6NEV1 266 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 FAM196BA6NMK8 535 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 PRMT2P55345 433 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 MCCD1P59942 119 aaPredicted RBP5.78□□□□□ -1.48
UBR4-215ENST00000492606 UBXN2AP68543 259 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 CLDN10P78369 228 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 LACTBP83111 547 aaPredicted RBP5.78□□□□□ -1.48
UBR4-215ENST00000492606 PLA2G2CQ5R387 149 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 LDLRAD1Q5T700 205 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 ANGEL2Q5VTE6 544 aaKnown RBP5.78□□□□□ -1.48
UBR4-215ENST00000492606 POTEGQ6S5H5 508 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.78□□□□□ -1.48
UBR4-215ENST00000492606 DPF2Q92785 391 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 WNK4Q96J92 1243 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 SRRDQ9UH36 339 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 FZD1Q9UP38 647 aa5.78□□□□□ -1.48
UBR4-215ENST00000492606 FCF1Q9Y324 198 aaKnown RBP5.78□□□□□ -1.48
UBR4-215ENST00000492606 ITPR3Q14573 2671 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L15C9J2P7 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L10C9JJH3 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L13C9JLJ4 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L12C9JPN9 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L11C9JVI0 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L21D6R901 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L18D6R9N7 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L22D6RA61 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L17D6RBQ6 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L19D6RCP7 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L20D6RJB6 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 ERC2O15083 957 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 CAMTA2O94983 1202 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 IGFBP4P22692 258 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 SH3BP2P78314 561 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 ST5P78524 1137 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 PDE4CQ08493 712 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 KCNA1Q09470 495 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 USP17L24Q0WX57 530 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 TNIP1Q15025 636 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 DNAJC10Q8IXB1 793 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 ZNF511Q8NB15 262 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 RGS22Q8NE09 1264 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 RAET1EQ8TD07 263 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 TRIM47Q96LD4 638 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 PAK6Q9NQU5 681 aaPredicted RBP5.77□□□□□ -1.49
UBR4-215ENST00000492606 NOVA2Q9UNW9 492 aaKnown RBP5.77□□□□□ -1.49
UBR4-215ENST00000492606 ZBTB1Q9Y2K1 713 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 BRWD1Q9NSI6 2320 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 HECTD1Q9ULT8 2610 aa5.77□□□□□ -1.49
UBR4-215ENST00000492606 NBEAQ8NFP9 2946 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 ESPNB1AK53 854 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 PROB1E7EW31 1015 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 LRRC26Q2I0M4 334 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 KIF4BQ2VIQ3 1234 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 LINC01559Q495D7 138 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 SLFNL1Q499Z3 407 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 CC2D2BQ6DHV5 1058 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 RNF135Q8IUD6 432 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 CLMNQ96JQ2 1002 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 LBHD1Q9BQE6 289 aaPredicted RBP5.76□□□□□ -1.49
UBR4-215ENST00000492606 C11orf49Q9H6J7 331 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 KIAA1024Q9UPX6 916 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 TECTAO75443 2155 aa5.76□□□□□ -1.49
UBR4-215ENST00000492606 PRRC2BQ5JSZ5 2229 aaKnown RBP5.75□□□□□ -1.49
UBR4-215ENST00000492606 LZTS3O60299 673 aaPredicted RBP5.75□□□□□ -1.49
UBR4-215ENST00000492606 GNRH1P01148 92 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 ALADP13716 330 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 PHKG2P15735 406 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 CAPN2P17655 700 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 ALDH1B1P30837 517 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 SKOR1P84550 965 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 SCARF1Q14162 830 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 MAP7D1Q3KQU3 841 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 OTUD7BQ6GQQ9 843 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 ZBTB33Q86T24 672 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 TRMT44Q8IYL2 757 aaKnown RBP5.75□□□□□ -1.49
UBR4-215ENST00000492606 ZKSCAN4Q969J2 545 aaPredicted RBP5.75□□□□□ -1.49
UBR4-215ENST00000492606 EMID1Q96A84 441 aaPredicted RBP5.75□□□□□ -1.49
UBR4-215ENST00000492606 MFSD14AQ96MC6 490 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 KMT2EQ8IZD2 1858 aa5.75□□□□□ -1.49
UBR4-215ENST00000492606 PLXNA1Q9UIW2 1896 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms