RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GRIN1Q05586 938 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 PDE4BQ07343 736 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 RRP12Q5JTH9 1297 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 SPECC1Q5M775 1068 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 UTP14CQ5TAP6 766 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 FANCLQ9NW38 375 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 FBXO2Q9UK22 296 aaPredicted RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 SLC4A4Q9Y6R1 1079 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 V9GYY5 206 aaPredicted RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 DOT1LQ8TEK3 1739 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 BCAMP50895 628 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 EIF5P55010 431 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 WTAPQ15007 396 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 VSTM4Q8IW00 320 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 NACAP1Q9BZK3 213 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 FOXP1Q9H334 677 aaPredicted RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 TMX1Q9H3N1 280 aa18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 DDX41Q9UJV9 622 aaKnown RBP18.54■□□□□ 0.56
SEMA4D-220ENST00000492386 PTPREP23469 700 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 SAFBQ15424 915 aaKnown RBP eCLIP18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 SYT10Q6XYQ8 523 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 TRIM22Q8IYM9 498 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 CRACR2BQ8N4Y2 399 aaPredicted RBP18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 COL14A1Q05707 1796 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 MYH6P13533 1939 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 SART3Q15020 963 aaKnown RBP18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 CFAP100Q494V2 611 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 KMT5BQ4FZB7 885 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 MTA3Q9BTC8 594 aa18.53■□□□□ 0.56
SEMA4D-220ENST00000492386 TMEM232C9JQI7 657 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 ELF2Q15723 593 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 CCDC93Q567U6 631 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 RILPL1Q5EBL4 403 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 CMTR1Q8N1G2 835 aaKnown RBP18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 TOMM22Q9NS69 142 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 INTS13Q9NVM9 706 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 WNK3Q9BYP7 1800 aa18.52■□□□□ 0.56
SEMA4D-220ENST00000492386 DEXIO95424 95 aa18.52■□□□□ 0.55
SEMA4D-220ENST00000492386 TUBB4AP04350 444 aa18.52■□□□□ 0.55
SEMA4D-220ENST00000492386 INTS5Q6P9B9 1019 aaKnown RBP18.52■□□□□ 0.55
SEMA4D-220ENST00000492386 UTP14AQ9BVJ6 771 aaKnown RBP18.52■□□□□ 0.55
SEMA4D-220ENST00000492386 MAN1B1Q9UKM7 699 aa18.52■□□□□ 0.55
SEMA4D-220ENST00000492386 LAMB2P55268 1798 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 BCL9LQ86UU0 1499 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 EXOC5O00471 708 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 RCAN1P53805 252 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 NR5A1Q13285 461 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 POSTNQ15063 836 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 NT5DC1Q5TFE4 455 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 CCDC82Q8N4S0 544 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 MIGA1Q8NAN2 632 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 PCDHB6Q9Y5E3 794 aa18.51■□□□□ 0.55
SEMA4D-220ENST00000492386 ZNF654Q8IZM8 581 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 TMTC2Q8N394 836 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 FANCBQ8NB91 859 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 GTPBP4Q9BZE4 634 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 HOOK1Q9UJC3 728 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 RTL9Q8NET4 1388 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 CCDC196A0A1B0GTZ2 297 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 ERICH2A1L162 156 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 POLR2DO15514 142 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 PRR29P0C7W0 189 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 SARSP49591 514 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 PTPN21Q16825 1174 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 FBXO38Q6PIJ6 1188 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 ZNF579Q8NAF0 562 aaKnown RBP18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 SERTAD1Q9UHV2 236 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 MORC2Q9Y6X9 1032 aaPredicted RBP18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 COL4A1P02462 1669 aa18.5■□□□□ 0.55
SEMA4D-220ENST00000492386 CCP110O43303 1012 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 TOP1P11387 765 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 ETF1P62495 437 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 PPARAQ07869 468 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 CCDC152Q4G0S7 254 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 ADGRA1Q86SQ6 560 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 OXER1Q8TDS5 423 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 RNF41Q9H4P4 317 aaPredicted RBP18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 LRP2BPQ9P2M1 347 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 GOLGA8FQ08AF8 430 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 GOLGA8DPQ0D2H9 430 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 TMEM139Q8IV31 216 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 CCDC87Q9NVE4 849 aa18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 SRPRBQ9Y5M8 271 aaKnown RBP18.49■□□□□ 0.55
SEMA4D-220ENST00000492386 ZNF18P17022 549 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 IGHMBP2P38935 993 aaKnown RBP18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 FMR1Q06787 632 aaKnown RBP eCLIP18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 TBX2Q13207 712 aaPredicted RBP18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 MORC3Q14149 939 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 SEC23AQ15436 765 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 TRIM65Q6PJ69 517 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 LRRN4CLQ8ND94 238 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 NUP133Q8WUM0 1156 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 SHISA4Q96DD7 197 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 RREB1Q92766 1687 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 PHLPP2Q6ZVD8 1323 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 CHRNDQ07001 517 aa18.48■□□□□ 0.55
SEMA4D-220ENST00000492386 CICQ96RK0 1608 aaPredicted RBP18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms