RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.47■□□□□ 0.07
TREX1-204ENST00000492235 HDAC5Q9UQL6 1122 aa15.47■□□□□ 0.07
TREX1-204ENST00000492235 A0A1W2PPC1 479 aa15.46■□□□□ 0.07
TREX1-204ENST00000492235 TBC1D12O60347 775 aa15.46■□□□□ 0.07
TREX1-204ENST00000492235 CAPN2P17655 700 aa15.46■□□□□ 0.07
TREX1-204ENST00000492235 TFCP2Q12800 502 aa15.46■□□□□ 0.07
TREX1-204ENST00000492235 MVPQ14764 893 aaKnown RBP15.46■□□□□ 0.07
TREX1-204ENST00000492235 NECAB2Q7Z6G3 386 aa15.46■□□□□ 0.07
TREX1-204ENST00000492235 PROCA1Q8NCQ7 364 aaPredicted RBP15.46■□□□□ 0.07
TREX1-204ENST00000492235 ZNF280CQ8ND82 737 aa15.46■□□□□ 0.07
TREX1-204ENST00000492235 OSBPL5Q9H0X9 879 aaPredicted RBP15.46■□□□□ 0.07
TREX1-204ENST00000492235 GCLCP48506 637 aaPredicted RBP15.45■□□□□ 0.06
TREX1-204ENST00000492235 HMGCS2P54868 508 aa15.45■□□□□ 0.06
TREX1-204ENST00000492235 PI16Q6UXB8 463 aa15.45■□□□□ 0.06
TREX1-204ENST00000492235 NEUROD6Q96NK8 337 aa15.45■□□□□ 0.06
TREX1-204ENST00000492235 API5Q9BZZ5 524 aaKnown RBP15.45■□□□□ 0.06
TREX1-204ENST00000492235 AKAP2Q9Y2D5 859 aa15.45■□□□□ 0.06
TREX1-204ENST00000492235 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.45■□□□□ 0.06
TREX1-204ENST00000492235 SRGAP3O43295 1099 aa15.44■□□□□ 0.06
TREX1-204ENST00000492235 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
TREX1-204ENST00000492235 HMGCRP04035 888 aa15.44■□□□□ 0.06
TREX1-204ENST00000492235 TRIM32Q13049 653 aa15.44■□□□□ 0.06
TREX1-204ENST00000492235 PABPC4Q13310 644 aaKnown RBP eCLIP15.44■□□□□ 0.06
TREX1-204ENST00000492235 RRP1BQ14684 758 aaKnown RBP15.44■□□□□ 0.06
TREX1-204ENST00000492235 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
TREX1-204ENST00000492235 C7orf61Q8IZ16 206 aa15.44■□□□□ 0.06
TREX1-204ENST00000492235 ASCC2Q9H1I8 757 aaPredicted RBP15.44■□□□□ 0.06
TREX1-204ENST00000492235 HMG20BQ9P0W2 317 aa15.44■□□□□ 0.06
TREX1-204ENST00000492235 LDHCP07864 332 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 CAP2P40123 477 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 GSTO1P78417 241 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 GORABQ5T7V8 394 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 ANKLE1Q8NAG6 615 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 SPATA5Q8NB90 893 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 NSUN4Q96CB9 384 aaKnown RBP15.43■□□□□ 0.06
TREX1-204ENST00000492235 HMX1Q9NP08 348 aaPredicted RBP15.43■□□□□ 0.06
TREX1-204ENST00000492235 RAI14Q9P0K7 980 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 GJD2Q9UKL4 321 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 ZMYND8Q9ULU4 1186 aaPredicted RBP15.43■□□□□ 0.06
TREX1-204ENST00000492235 PLXNB2O15031 1838 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 DDX60LQ5H9U9 1706 aaKnown RBP15.43■□□□□ 0.06
TREX1-204ENST00000492235 RPTORQ8N122 1335 aa15.43■□□□□ 0.06
TREX1-204ENST00000492235 COL2A1P02458 1487 aaPredicted RBP15.42■□□□□ 0.06
TREX1-204ENST00000492235 USP17L5A8MUK1 530 aa15.42■□□□□ 0.06
TREX1-204ENST00000492235 TEX11Q8IYF3 940 aa15.42■□□□□ 0.06
TREX1-204ENST00000492235 TBC1D2Q9BYX2 928 aa15.42■□□□□ 0.06
TREX1-204ENST00000492235 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
TREX1-204ENST00000492235 MAP4K4O95819 1239 aaPredicted RBP15.41■□□□□ 0.06
TREX1-204ENST00000492235 SH3D19Q5HYK7 790 aa15.41■□□□□ 0.06
TREX1-204ENST00000492235 TRMT2AQ8IZ69 625 aaKnown RBP15.41■□□□□ 0.06
TREX1-204ENST00000492235 GDF15Q99988 308 aa15.41■□□□□ 0.06
TREX1-204ENST00000492235 NBPF3Q9H094 633 aa15.41■□□□□ 0.06
TREX1-204ENST00000492235 AS3MTQ9HBK9 375 aa15.41■□□□□ 0.06
TREX1-204ENST00000492235 SIPA1L1O43166 1804 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 PEX10O60683 326 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 GNAI3P08754 354 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 CT47B1P0C2W7 299 aaPredicted RBP15.4■□□□□ 0.06
TREX1-204ENST00000492235 SYN1P17600 705 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 CYP2B6P20813 491 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 MNX1P50219 401 aaPredicted RBP15.4■□□□□ 0.06
TREX1-204ENST00000492235 IRX3P78415 501 aaPredicted RBP15.4■□□□□ 0.06
TREX1-204ENST00000492235 MTMR2Q13614 643 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 SH3RF3Q8TEJ3 882 aaPredicted RBP15.4■□□□□ 0.06
TREX1-204ENST00000492235 TRIB2Q92519 343 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 C11orf49Q9H6J7 331 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 LRP2BPQ9P2M1 347 aa15.4■□□□□ 0.06
TREX1-204ENST00000492235 HERC5Q9UII4 1024 aaKnown RBP15.4■□□□□ 0.06
TREX1-204ENST00000492235 ARID4AP29374 1257 aaPredicted RBP15.39■□□□□ 0.05
TREX1-204ENST00000492235 BMP8BP34820 402 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 MCAMP43121 646 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 MTX1Q13505 466 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 P2RX7Q99572 595 aaKnown RBP15.39■□□□□ 0.05
TREX1-204ENST00000492235 NOL10Q9BSC4 688 aaKnown RBP15.39■□□□□ 0.05
TREX1-204ENST00000492235 PI4KBQ9UBF8 816 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 MORF4L1Q9UBU8 362 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 COL6A3P12111 3177 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 CUL9Q8IWT3 2517 aa15.39■□□□□ 0.05
TREX1-204ENST00000492235 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
TREX1-204ENST00000492235 BACE1P56817 501 aa15.38■□□□□ 0.05
TREX1-204ENST00000492235 WDR18Q9BV38 432 aa15.38■□□□□ 0.05
TREX1-204ENST00000492235 AATFQ9NY61 560 aaKnown RBP eCLIP15.38■□□□□ 0.05
TREX1-204ENST00000492235 TMOD4Q9NZQ9 345 aa15.38■□□□□ 0.05
TREX1-204ENST00000492235 OGDHLQ9ULD0 1010 aa15.38■□□□□ 0.05
TREX1-204ENST00000492235 CDK5RAP2Q96SN8 1893 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 MAST2Q6P0Q8 1798 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 ASNSP08243 561 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 MAGEA10P43363 369 aaPredicted RBP15.37■□□□□ 0.05
TREX1-204ENST00000492235 RARSP54136 660 aaKnown RBP15.37■□□□□ 0.05
TREX1-204ENST00000492235 HERVK_113P62684 666 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 JAG1P78504 1218 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 SHROOM1Q2M3G4 852 aaPredicted RBP15.37■□□□□ 0.05
TREX1-204ENST00000492235 NUDT12Q9BQG2 462 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 TXNRD2Q9NNW7 524 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 SNRKQ9NRH2 765 aa15.37■□□□□ 0.05
TREX1-204ENST00000492235 GDF11O95390 407 aa15.36■□□□□ 0.05
TREX1-204ENST00000492235 BAG3O95817 575 aa15.36■□□□□ 0.05
TREX1-204ENST00000492235 UQCRFS1P1P0C7P4 283 aa15.36■□□□□ 0.05
TREX1-204ENST00000492235 HOXA7P31268 230 aaPredicted RBP15.36■□□□□ 0.05
TREX1-204ENST00000492235 G3BP1Q13283 466 aaKnown RBP eCLIP15.36■□□□□ 0.05
TREX1-204ENST00000492235 MAP3K21Q5TCX8 1036 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms