RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 NAV1Q8NEY1 1877 aa28.04■■■□□ 2.08
CPNE9-204ENST00000491802 DDX60LQ5H9U9 1706 aaKnown RBP28.04■■■□□ 2.08
CPNE9-204ENST00000491802 MYH1P12882 1939 aa28.03■■■□□ 2.08
CPNE9-204ENST00000491802 PHF20L1A8MW92 1017 aa28.03■■■□□ 2.08
CPNE9-204ENST00000491802 ZFYP08048 801 aaPredicted RBP28.03■■■□□ 2.08
CPNE9-204ENST00000491802 CNKSR2Q8WXI2 1034 aa28.03■■■□□ 2.08
CPNE9-204ENST00000491802 PALD1Q9ULE6 856 aa28.03■■■□□ 2.08
CPNE9-204ENST00000491802 DOCK1Q14185 1865 aa28.02■■■□□ 2.08
CPNE9-204ENST00000491802 RNF113AO15541 343 aaKnown RBP28.02■■■□□ 2.08
CPNE9-204ENST00000491802 SLC4A8Q2Y0W8 1093 aa28.02■■■□□ 2.08
CPNE9-204ENST00000491802 LRRFIP1Q32MZ4 808 aaKnown RBP28.02■■■□□ 2.08
CPNE9-204ENST00000491802 PLEKHM2Q8IWE5 1019 aa28.02■■■□□ 2.08
CPNE9-204ENST00000491802 APPBP2Q92624 585 aa28.02■■■□□ 2.08
CPNE9-204ENST00000491802 PUS7LQ9H0K6 701 aaKnown RBP28.02■■■□□ 2.08
CPNE9-204ENST00000491802 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.02■■■□□ 2.08
CPNE9-204ENST00000491802 PI4KBQ9UBF8 816 aa28.02■■■□□ 2.08
CPNE9-204ENST00000491802 ALDH1A1P00352 501 aa28.01■■■□□ 2.07
CPNE9-204ENST00000491802 PPATQ06203 517 aa28.01■■■□□ 2.07
CPNE9-204ENST00000491802 SDR42E1Q8WUS8 393 aa28.01■■■□□ 2.07
CPNE9-204ENST00000491802 OTUD5Q96G74 571 aa28.01■■■□□ 2.07
CPNE9-204ENST00000491802 HLA-DOAP06340 250 aa28■■■□□ 2.07
CPNE9-204ENST00000491802 PPIL2Q13356 520 aa28■■■□□ 2.07
CPNE9-204ENST00000491802 COL13A1Q5TAT6 717 aaPredicted RBP28■■■□□ 2.07
CPNE9-204ENST00000491802 METTL16Q86W50 562 aaKnown RBP28■■■□□ 2.07
CPNE9-204ENST00000491802 EVI5LQ96CN4 794 aa28■■■□□ 2.07
CPNE9-204ENST00000491802 MS4A4AQ96JQ5 239 aa28■■■□□ 2.07
CPNE9-204ENST00000491802 HERC5Q9UII4 1024 aaKnown RBP28■■■□□ 2.07
CPNE9-204ENST00000491802 TRPA1O75762 1119 aa27.99■■■□□ 2.07
CPNE9-204ENST00000491802 NEFLP07196 543 aa27.99■■■□□ 2.07
CPNE9-204ENST00000491802 NOM1Q5C9Z4 860 aaKnown RBP27.99■■■□□ 2.07
CPNE9-204ENST00000491802 OSBP2Q969R2 916 aa27.99■■■□□ 2.07
CPNE9-204ENST00000491802 OSBPL3Q9H4L5 887 aa27.99■■■□□ 2.07
CPNE9-204ENST00000491802 PRKAB2O43741 272 aa27.98■■■□□ 2.07
CPNE9-204ENST00000491802 PDE4AP27815 886 aa27.98■■■□□ 2.07
CPNE9-204ENST00000491802 GTF2A2P52657 109 aa27.98■■■□□ 2.07
CPNE9-204ENST00000491802 IFNL1Q8IU54 200 aa27.98■■■□□ 2.07
CPNE9-204ENST00000491802 SCYL3Q8IZE3 742 aa27.98■■■□□ 2.07
CPNE9-204ENST00000491802 CRACR2BQ8N4Y2 399 aaPredicted RBP27.98■■■□□ 2.07
CPNE9-204ENST00000491802 PHIPQ8WWQ0 1821 aa27.97■■■□□ 2.07
CPNE9-204ENST00000491802 CASP8AP2Q9UKL3 1982 aa27.97■■■□□ 2.07
CPNE9-204ENST00000491802 CTNND1O60716 968 aaKnown RBP27.97■■■□□ 2.07
CPNE9-204ENST00000491802 TRIM34Q9BYJ4 488 aa27.97■■■□□ 2.07
CPNE9-204ENST00000491802 DNAJC18Q9H819 358 aa27.97■■■□□ 2.07
CPNE9-204ENST00000491802 DCP1AQ9NPI6 582 aaPredicted RBP27.97■■■□□ 2.07
CPNE9-204ENST00000491802 ATAD5Q96QE3 1844 aa27.97■■■□□ 2.07
CPNE9-204ENST00000491802 FOXP4Q8IVH2 680 aaPredicted RBP27.96■■■□□ 2.07
CPNE9-204ENST00000491802 PICK1Q9NRD5 415 aa27.96■■■□□ 2.07
CPNE9-204ENST00000491802 MCM9Q9NXL9 1143 aa27.96■■■□□ 2.07
CPNE9-204ENST00000491802 TSKSQ9UJT2 592 aa27.96■■■□□ 2.07
CPNE9-204ENST00000491802 SLC4A4Q9Y6R1 1079 aa27.96■■■□□ 2.07
CPNE9-204ENST00000491802 TRIM6-TRIM34B2RNG4 842 aa27.95■■■□□ 2.06
CPNE9-204ENST00000491802 M0R2C6 588 aa27.95■■■□□ 2.06
CPNE9-204ENST00000491802 POLR3DP05423 398 aaPredicted RBP27.95■■■□□ 2.06
CPNE9-204ENST00000491802 OTUD7BQ6GQQ9 843 aa27.95■■■□□ 2.06
CPNE9-204ENST00000491802 TTC6Q86TZ1 520 aa27.95■■■□□ 2.06
CPNE9-204ENST00000491802 ATP8A2Q9NTI2 1148 aa27.95■■■□□ 2.06
CPNE9-204ENST00000491802 KCNH4Q9UQ05 1017 aa27.95■■■□□ 2.06
CPNE9-204ENST00000491802 IGF2BP3O00425 579 aaKnown RBP eCLIP27.94■■■□□ 2.06
CPNE9-204ENST00000491802 IRF6O14896 467 aa27.94■■■□□ 2.06
CPNE9-204ENST00000491802 GPAA1O43292 621 aa27.94■■■□□ 2.06
CPNE9-204ENST00000491802 STRBPQ96SI9 672 aaKnown RBP27.94■■■□□ 2.06
CPNE9-204ENST00000491802 EHD4Q9H223 541 aa27.94■■■□□ 2.06
CPNE9-204ENST00000491802 PTPRFP10586 1907 aa27.94■■■□□ 2.06
CPNE9-204ENST00000491802 SNAPC2Q13487 334 aa27.93■■■□□ 2.06
CPNE9-204ENST00000491802 ZMYM1Q5SVZ6 1142 aa27.93■■■□□ 2.06
CPNE9-204ENST00000491802 RILPL2Q969X0 211 aa27.93■■■□□ 2.06
CPNE9-204ENST00000491802 SEC62Q99442 399 aaKnown RBP27.93■■■□□ 2.06
CPNE9-204ENST00000491802 PTPN18Q99952 460 aa27.93■■■□□ 2.06
CPNE9-204ENST00000491802 ZCCHC17Q9NP64 241 aaKnown RBP27.93■■■□□ 2.06
CPNE9-204ENST00000491802 SERPINB13Q9UIV8 391 aa27.93■■■□□ 2.06
CPNE9-204ENST00000491802 CETPP11597 493 aa27.92■■■□□ 2.06
CPNE9-204ENST00000491802 PLCD1P51178 756 aa27.92■■■□□ 2.06
CPNE9-204ENST00000491802 RRP1BQ14684 758 aaKnown RBP27.92■■■□□ 2.06
CPNE9-204ENST00000491802 BRI3BPQ8WY22 251 aa27.92■■■□□ 2.06
CPNE9-204ENST00000491802 DDRGK1Q96HY6 314 aa27.92■■■□□ 2.06
CPNE9-204ENST00000491802 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.92■■■□□ 2.06
CPNE9-204ENST00000491802 CCL15-CCL14A0A0B4J2E2 113 aa27.91■■■□□ 2.06
CPNE9-204ENST00000491802 CYP2D6P10635 497 aa27.91■■■□□ 2.06
CPNE9-204ENST00000491802 PTPRAP18433 802 aa27.91■■■□□ 2.06
CPNE9-204ENST00000491802 CCL15Q16663 113 aa27.91■■■□□ 2.06
CPNE9-204ENST00000491802 CENPQQ7L2Z9 268 aaPredicted RBP27.91■■■□□ 2.06
CPNE9-204ENST00000491802 TAOK2Q9UL54 1235 aa27.91■■■□□ 2.06
CPNE9-204ENST00000491802 CXCL11O14625 94 aa27.9■■■□□ 2.06
CPNE9-204ENST00000491802 CAP2P40123 477 aa27.9■■■□□ 2.06
CPNE9-204ENST00000491802 EVX2Q03828 476 aa27.9■■■□□ 2.06
CPNE9-204ENST00000491802 TBC1D2Q9BYX2 928 aa27.9■■■□□ 2.06
CPNE9-204ENST00000491802 GINM1Q9NU53 330 aa27.9■■■□□ 2.06
CPNE9-204ENST00000491802 CCDC84Q86UT8 332 aaPredicted RBP27.89■■■□□ 2.06
CPNE9-204ENST00000491802 ZHX2Q9Y6X8 837 aa27.89■■■□□ 2.06
CPNE9-204ENST00000491802 BAZ2AQ9UIF9 1905 aaKnown RBP27.88■■■□□ 2.05
CPNE9-204ENST00000491802 GNAT2P19087 354 aa27.88■■■□□ 2.05
CPNE9-204ENST00000491802 AMOTL1Q8IY63 956 aa27.88■■■□□ 2.05
CPNE9-204ENST00000491802 GSG1L2A8MUP6 293 aa27.87■■■□□ 2.05
CPNE9-204ENST00000491802 GDF11O95390 407 aa27.87■■■□□ 2.05
CPNE9-204ENST00000491802 TBC1D8O95759 1140 aa27.87■■■□□ 2.05
CPNE9-204ENST00000491802 TICAM2Q86XR7 235 aa27.87■■■□□ 2.05
CPNE9-204ENST00000491802 AFG3L2Q9Y4W6 797 aa27.87■■■□□ 2.05
CPNE9-204ENST00000491802 CYP2D7A0A087X1C5 515 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 USP17L12C9JPN9 530 aa27.86■■■□□ 2.05
CPNE9-204ENST00000491802 USP17L21D6R901 530 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms