RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 DDX60LQ5H9U9 1706 aaKnown RBP13.5□□□□□ -0.25
TMEM39A-211ENST00000491685 DOCK3Q8IZD9 2030 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 CXCL11O14625 94 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 BCRP11274 1271 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 OSBPP22059 807 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 PSMC4P43686 418 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 KIF22Q14807 665 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 TMEM106CQ9BVX2 250 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 OSBPL5Q9H0X9 879 aaPredicted RBP13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 PICK1Q9NRD5 415 aa13.49□□□□□ -0.25
TMEM39A-211ENST00000491685 PLXNB2O15031 1838 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 TRIM75PA6NK02 468 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 SURF6O75683 361 aaKnown RBP13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 CYP2E1P05181 493 aaPredicted RBP13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 NEFLP07196 543 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 UQCRFS1P1P0C7P4 283 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 MTFR1Q15390 333 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 TTC39AQ5SRH9 613 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 GADL1Q6ZQY3 521 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 PARK7Q99497 189 aaKnown RBP13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 PIH1D3Q9NQM4 214 aaKnown RBP13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 DBNLQ9UJU6 430 aaKnown RBP13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 NAV1Q8NEY1 1877 aa13.48□□□□□ -0.25
TMEM39A-211ENST00000491685 MYPNQ86TC9 1320 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 CTNND1O60716 968 aaKnown RBP13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 NPM3O75607 178 aaKnown RBP13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 GSTO1P78417 241 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 PRKCZQ05513 592 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 OS9Q13438 667 aaPredicted RBP13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 TREML2Q5T2D2 321 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 TEX11Q8IYF3 940 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 SHISA4Q96DD7 197 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 CRBNQ96SW2 442 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 GPR108Q9NPR9 543 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 AATFQ9NY61 560 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 LRP2BPQ9P2M1 347 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 SRRDQ9UH36 339 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 GABRQQ9UN88 632 aa13.47□□□□□ -0.25
TMEM39A-211ENST00000491685 TBC1D12O60347 775 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 FMNL1O95466 1100 aaPredicted RBP13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 GNRH1P01148 92 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 LDHCP07864 332 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 ZAP70P43403 619 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 JAG1P78504 1218 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 SLC4A8Q2Y0W8 1093 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 EAF2Q96CJ1 260 aaPredicted RBP13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 DNAJC18Q9H819 358 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 NOP58Q9Y2X3 529 aaKnown RBP13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 NDUFB9Q9Y6M9 179 aa13.46□□□□□ -0.25
TMEM39A-211ENST00000491685 FLT1P17948 1338 aa13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 NAA16Q6N069 864 aaPredicted RBP13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 CEP85Q6P2H3 762 aa13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 FASTKD5Q7L8L6 764 aaKnown RBP13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 NBPF11Q86T75 865 aa13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 ERC1Q8IUD2 1116 aa13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 RANBP2P49792 3224 aaKnown RBP13.45□□□□□ -0.26
TMEM39A-211ENST00000491685 H0YGN5 161 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 PRMT2P55345 433 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 FCGRTP55899 365 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 DYNLL1P63167 89 aaKnown RBP13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 CCDC158Q5M9N0 1113 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 MAPKAPK5Q8IW41 473 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 RWDD1Q9H446 243 aaPredicted RBP13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 AGTPBP1Q9UPW5 1226 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 EXOC6BQ9Y2D4 811 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 ALPK3Q96L96 1907 aa13.44□□□□□ -0.26
TMEM39A-211ENST00000491685 RAB11FIP3O75154 756 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 MAP4K4O95819 1239 aaPredicted RBP13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 GRK4P32298 578 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 CAP2P40123 477 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 HMGCS2P54868 508 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 SPP2Q13103 211 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 RAET1EQ8TD07 263 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 ZNF512BQ96KM6 892 aaPredicted RBP13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 ANTXR1Q9H6X2 564 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 SLC45A1Q9Y2W3 748 aa13.43□□□□□ -0.26
TMEM39A-211ENST00000491685 PPP4CP60510 307 aa13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 ANKRD13CQ8N6S4 541 aa13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 ZNF280CQ8ND82 737 aa13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 SMCR8Q8TEV9 937 aaPredicted RBP13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 SAP30BPQ9UHR5 308 aaKnown RBP13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 PALD1Q9ULE6 856 aa13.42□□□□□ -0.26
TMEM39A-211ENST00000491685 MYH7P12883 1935 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 MYH8P13535 1937 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 PEX10O60683 326 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 IGSF3O75054 1194 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 GDF11O95390 407 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 CCL5P13501 91 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 ELNP15502 786 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 HOXD10P28358 340 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 FLT3LGP49771 235 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 MIGA1Q8NAN2 632 aa13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 PROCA1Q8NCQ7 364 aaPredicted RBP13.41□□□□□ -0.26
TMEM39A-211ENST00000491685 NOL10Q9BSC4 688 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms