RNA–Protein interactions for RNA: ENST00000491539.5

NCK1-211, Transcript of NCK adaptor protein 1, humanhuman

TSL 4

Gene NCK1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-211ENST00000491539 PNMA6EA0A0J9YXQ4 647 aa17.22■□□□□ 0.35
NCK1-211ENST00000491539 TRIM75PA6NK02 468 aa17.22■□□□□ 0.35
NCK1-211ENST00000491539 SEMA3EO15041 775 aa17.22■□□□□ 0.35
NCK1-211ENST00000491539 C7orf61Q8IZ16 206 aa17.22■□□□□ 0.35
NCK1-211ENST00000491539 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.22■□□□□ 0.35
NCK1-211ENST00000491539 GNL3LQ9NVN8 582 aaKnown RBP17.22■□□□□ 0.35
NCK1-211ENST00000491539 ZMYND8Q9ULU4 1186 aaPredicted RBP17.22■□□□□ 0.35
NCK1-211ENST00000491539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.22■□□□□ 0.35
NCK1-211ENST00000491539 A0A1W2PPC1 479 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 LDHBP07195 334 aaKnown RBP17.21■□□□□ 0.35
NCK1-211ENST00000491539 RLBP1P12271 317 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 MNX1P50219 401 aaPredicted RBP17.21■□□□□ 0.35
NCK1-211ENST00000491539 TFCP2Q12800 502 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 IRF5Q13568 498 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 CCDC102BQ68D86 513 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 Q7L0L9 218 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 ANKRD13CQ8N6S4 541 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 PXYLP1Q8TE99 480 aa17.21■□□□□ 0.35
NCK1-211ENST00000491539 A0A1B0GUL7 405 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 TIMM10P62072 90 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 PICALMQ13492 652 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 FTSJ3Q8IY81 847 aaKnown RBP17.2■□□□□ 0.34
NCK1-211ENST00000491539 SMCR8Q8TEV9 937 aaPredicted RBP17.2■□□□□ 0.34
NCK1-211ENST00000491539 ZNF384Q8TF68 577 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 GDF15Q99988 308 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 IDI2Q9BXS1 227 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 PICK1Q9NRD5 415 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 DENND2AQ9ULE3 1009 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 AKAP2Q9Y2D5 859 aa17.2■□□□□ 0.34
NCK1-211ENST00000491539 PDS5AQ29RF7 1337 aaKnown RBP17.2■□□□□ 0.34
NCK1-211ENST00000491539 DNAH12Q6ZR08 3092 aa17.19■□□□□ 0.34
NCK1-211ENST00000491539 TFRCP02786 760 aaKnown RBP17.19■□□□□ 0.34
NCK1-211ENST00000491539 RASGRF1Q13972 1273 aa17.19■□□□□ 0.34
NCK1-211ENST00000491539 POLA2Q14181 598 aa17.19■□□□□ 0.34
NCK1-211ENST00000491539 FASTKD5Q7L8L6 764 aaKnown RBP17.19■□□□□ 0.34
NCK1-211ENST00000491539 AGTPBP1Q9UPW5 1226 aa17.19■□□□□ 0.34
NCK1-211ENST00000491539 SLC45A1Q9Y2W3 748 aa17.19■□□□□ 0.34
NCK1-211ENST00000491539 MYH1P12882 1939 aa17.19■□□□□ 0.34
NCK1-211ENST00000491539 PEX10O60683 326 aa17.18■□□□□ 0.34
NCK1-211ENST00000491539 ENTPD3O75355 529 aa17.18■□□□□ 0.34
NCK1-211ENST00000491539 SYN1P17600 705 aa17.18■□□□□ 0.34
NCK1-211ENST00000491539 RRP1BQ14684 758 aaKnown RBP17.18■□□□□ 0.34
NCK1-211ENST00000491539 SSH3Q8TE77 659 aa17.18■□□□□ 0.34
NCK1-211ENST00000491539 XAGE2Q96GT9 111 aa17.18■□□□□ 0.34
NCK1-211ENST00000491539 COL2A1P02458 1487 aaPredicted RBP17.18■□□□□ 0.34
NCK1-211ENST00000491539 BTDP43251 543 aa17.17■□□□□ 0.34
NCK1-211ENST00000491539 ATP8B2P98198 1209 aa17.17■□□□□ 0.34
NCK1-211ENST00000491539 MAP3K10Q02779 954 aa17.17■□□□□ 0.34
NCK1-211ENST00000491539 FAM110CQ1W6H9 321 aa17.17■□□□□ 0.34
NCK1-211ENST00000491539 ZSCAN29Q8IWY8 852 aaPredicted RBP17.17■□□□□ 0.34
NCK1-211ENST00000491539 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
NCK1-211ENST00000491539 PFASO15067 1338 aa17.17■□□□□ 0.34
NCK1-211ENST00000491539 RLFQ13129 1914 aa17.16■□□□□ 0.34
NCK1-211ENST00000491539 G3BP1Q13283 466 aaKnown RBP eCLIP17.16■□□□□ 0.34
NCK1-211ENST00000491539 MVPQ14764 893 aaKnown RBP17.16■□□□□ 0.34
NCK1-211ENST00000491539 ITPRIPQ8IWB1 547 aa17.16■□□□□ 0.34
NCK1-211ENST00000491539 C1orf115Q9H7X2 142 aa17.16■□□□□ 0.34
NCK1-211ENST00000491539 MAGEA10P43363 369 aaPredicted RBP17.15■□□□□ 0.34
NCK1-211ENST00000491539 RHBDL3P58872 404 aa17.15■□□□□ 0.34
NCK1-211ENST00000491539 ZGPATQ8N5A5 531 aaKnown RBP17.15■□□□□ 0.34
NCK1-211ENST00000491539 TRIB2Q92519 343 aa17.15■□□□□ 0.34
NCK1-211ENST00000491539 A0A0G2JMZ2 1700 aa17.15■□□□□ 0.34
NCK1-211ENST00000491539 CTNND1O60716 968 aaKnown RBP17.14■□□□□ 0.33
NCK1-211ENST00000491539 HMGCRP04035 888 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 HMGCS2P54868 508 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 SHROOM1Q2M3G4 852 aaPredicted RBP17.14■□□□□ 0.33
NCK1-211ENST00000491539 PI16Q6UXB8 463 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 NECAB2Q7Z6G3 386 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 DZIP1Q86YF9 867 aaKnown RBP17.14■□□□□ 0.33
NCK1-211ENST00000491539 DEFB123Q8N688 67 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 PANK1Q8TE04 598 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 NEUROD6Q96NK8 337 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 NAV1Q8NEY1 1877 aa17.14■□□□□ 0.33
NCK1-211ENST00000491539 PRUNE2Q8WUY3 3088 aa17.13■□□□□ 0.33
NCK1-211ENST00000491539 PARP14Q460N5 1801 aa17.13■□□□□ 0.33
NCK1-211ENST00000491539 ARID4AP29374 1257 aaPredicted RBP17.13■□□□□ 0.33
NCK1-211ENST00000491539 COA7Q96BR5 231 aa17.13■□□□□ 0.33
NCK1-211ENST00000491539 GPR108Q9NPR9 543 aa17.13■□□□□ 0.33
NCK1-211ENST00000491539 ABCF2Q9UG63 623 aa17.13■□□□□ 0.33
NCK1-211ENST00000491539 GJD2Q9UKL4 321 aa17.13■□□□□ 0.33
NCK1-211ENST00000491539 NOP58Q9Y2X3 529 aaKnown RBP17.13■□□□□ 0.33
NCK1-211ENST00000491539 BMP8BP34820 402 aa17.12■□□□□ 0.33
NCK1-211ENST00000491539 PROCA1Q8NCQ7 364 aaPredicted RBP17.12■□□□□ 0.33
NCK1-211ENST00000491539 FAM163AQ96GL9 167 aaPredicted RBP17.12■□□□□ 0.33
NCK1-211ENST00000491539 HMG20BQ9P0W2 317 aa17.12■□□□□ 0.33
NCK1-211ENST00000491539 SURF6O75683 361 aaKnown RBP17.11■□□□□ 0.33
NCK1-211ENST00000491539 JAG1P78504 1218 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 MECOMQ03112 1051 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 SPP2Q13103 211 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 TNNI3KQ59H18 835 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 CEP85Q6P2H3 762 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 ANKLE1Q8NAG6 615 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 ASCC2Q9H1I8 757 aaPredicted RBP17.11■□□□□ 0.33
NCK1-211ENST00000491539 FPGT-TNNI3KV9GXZ4 949 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 MYH8P13535 1937 aa17.11■□□□□ 0.33
NCK1-211ENST00000491539 ZNF236Q9UL36 1845 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 MCAMP43121 646 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 GORABQ5T7V8 394 aa17.1■□□□□ 0.33
NCK1-211ENST00000491539 SPTY2D1Q68D10 685 aaPredicted RBP17.1■□□□□ 0.33
NCK1-211ENST00000491539 SPATA5Q8NB90 893 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms