RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 XAGE2Q96GT9 111 aa25.56■■□□□ 1.68
CLIP2-208ENST00000491075 NOB1Q9ULX3 412 aaKnown RBP25.56■■□□□ 1.68
CLIP2-208ENST00000491075 GCLCP48506 637 aaPredicted RBP25.55■■□□□ 1.68
CLIP2-208ENST00000491075 LAMA3Q16787 3333 aa25.55■■□□□ 1.68
CLIP2-208ENST00000491075 GSTO1P78417 241 aa25.54■■□□□ 1.68
CLIP2-208ENST00000491075 PABPC4Q13310 644 aaKnown RBP eCLIP25.54■■□□□ 1.68
CLIP2-208ENST00000491075 NECAB2Q7Z6G3 386 aa25.54■■□□□ 1.68
CLIP2-208ENST00000491075 ZNF280CQ8ND82 737 aa25.54■■□□□ 1.68
CLIP2-208ENST00000491075 MEIS3Q99687 375 aa25.54■■□□□ 1.68
CLIP2-208ENST00000491075 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.54■■□□□ 1.68
CLIP2-208ENST00000491075 COL6A3P12111 3177 aa25.54■■□□□ 1.68
CLIP2-208ENST00000491075 FAM196BA6NMK8 535 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 HMGCRP04035 888 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 LDHCP07864 332 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 SPP2Q13103 211 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 ANKLE1Q8NAG6 615 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 ZNF384Q8TF68 577 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 CDCA7LQ96GN5 454 aa25.53■■□□□ 1.68
CLIP2-208ENST00000491075 PAWRQ96IZ0 340 aaKnown RBP25.53■■□□□ 1.68
CLIP2-208ENST00000491075 TFCP2Q12800 502 aa25.52■■□□□ 1.68
CLIP2-208ENST00000491075 PLXNB2O15031 1838 aa25.51■■□□□ 1.67
CLIP2-208ENST00000491075 SRGAP3O43295 1099 aa25.51■■□□□ 1.67
CLIP2-208ENST00000491075 TRMT2AQ8IZ69 625 aaKnown RBP25.51■■□□□ 1.67
CLIP2-208ENST00000491075 HMG20BQ9P0W2 317 aa25.51■■□□□ 1.67
CLIP2-208ENST00000491075 DDX60LQ5H9U9 1706 aaKnown RBP25.51■■□□□ 1.67
CLIP2-208ENST00000491075 MAST2Q6P0Q8 1798 aa25.51■■□□□ 1.67
CLIP2-208ENST00000491075 CAP2P40123 477 aa25.5■■□□□ 1.67
CLIP2-208ENST00000491075 HMGCS2P54868 508 aa25.5■■□□□ 1.67
CLIP2-208ENST00000491075 MTX1Q13505 466 aa25.5■■□□□ 1.67
CLIP2-208ENST00000491075 NSUN4Q96CB9 384 aaKnown RBP25.5■■□□□ 1.67
CLIP2-208ENST00000491075 STAP2Q9UGK3 403 aa25.5■■□□□ 1.67
CLIP2-208ENST00000491075 SIPA1L1O43166 1804 aa25.49■■□□□ 1.67
CLIP2-208ENST00000491075 USP17L5A8MUK1 530 aa25.49■■□□□ 1.67
CLIP2-208ENST00000491075 GNAI3P08754 354 aa25.49■■□□□ 1.67
CLIP2-208ENST00000491075 SPATA5Q8NB90 893 aa25.49■■□□□ 1.67
CLIP2-208ENST00000491075 DIS3LQ8TF46 1054 aaKnown RBP25.49■■□□□ 1.67
CLIP2-208ENST00000491075 NEUROD6Q96NK8 337 aa25.49■■□□□ 1.67
CLIP2-208ENST00000491075 ASCC2Q9H1I8 757 aaPredicted RBP25.49■■□□□ 1.67
CLIP2-208ENST00000491075 AS3MTQ9HBK9 375 aa25.49■■□□□ 1.67
CLIP2-208ENST00000491075 HERC5Q9UII4 1024 aaKnown RBP25.49■■□□□ 1.67
CLIP2-208ENST00000491075 RPTORQ8N122 1335 aa25.48■■□□□ 1.67
CLIP2-208ENST00000491075 SOX1O00570 391 aaPredicted RBP25.48■■□□□ 1.67
CLIP2-208ENST00000491075 SH3D19Q5HYK7 790 aa25.48■■□□□ 1.67
CLIP2-208ENST00000491075 GORABQ5T7V8 394 aa25.48■■□□□ 1.67
CLIP2-208ENST00000491075 HMX1Q9NP08 348 aaPredicted RBP25.48■■□□□ 1.67
CLIP2-208ENST00000491075 CDK5RAP2Q96SN8 1893 aa25.47■■□□□ 1.67
CLIP2-208ENST00000491075 FOCADQ5VW36 1801 aa25.47■■□□□ 1.67
CLIP2-208ENST00000491075 ARID4AP29374 1257 aaPredicted RBP25.47■■□□□ 1.67
CLIP2-208ENST00000491075 PI16Q6UXB8 463 aa25.47■■□□□ 1.67
CLIP2-208ENST00000491075 RAI14Q9P0K7 980 aa25.47■■□□□ 1.67
CLIP2-208ENST00000491075 GJD2Q9UKL4 321 aa25.47■■□□□ 1.67
CLIP2-208ENST00000491075 TBC1D9Q6ZT07 1266 aa25.46■■□□□ 1.67
CLIP2-208ENST00000491075 TEX11Q8IYF3 940 aa25.46■■□□□ 1.67
CLIP2-208ENST00000491075 LRCH3Q96II8 777 aa25.46■■□□□ 1.67
CLIP2-208ENST00000491075 MORF4L1Q9UBU8 362 aa25.46■■□□□ 1.67
CLIP2-208ENST00000491075 BMP8BP34820 402 aa25.45■■□□□ 1.66
CLIP2-208ENST00000491075 C7orf61Q8IZ16 206 aa25.45■■□□□ 1.66
CLIP2-208ENST00000491075 SLC17A8Q8NDX2 589 aa25.45■■□□□ 1.66
CLIP2-208ENST00000491075 GDF15Q99988 308 aa25.45■■□□□ 1.66
CLIP2-208ENST00000491075 NOL10Q9BSC4 688 aaKnown RBP25.45■■□□□ 1.66
CLIP2-208ENST00000491075 NBPF3Q9H094 633 aa25.45■■□□□ 1.66
CLIP2-208ENST00000491075 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.45■■□□□ 1.66
CLIP2-208ENST00000491075 IRX3P78415 501 aaPredicted RBP25.44■■□□□ 1.66
CLIP2-208ENST00000491075 RRP1BQ14684 758 aaKnown RBP25.44■■□□□ 1.66
CLIP2-208ENST00000491075 ARHGAP45Q92619 1136 aa25.44■■□□□ 1.66
CLIP2-208ENST00000491075 WDR18Q9BV38 432 aa25.44■■□□□ 1.66
CLIP2-208ENST00000491075 DHX36Q9H2U1 1008 aaKnown RBP25.44■■□□□ 1.66
CLIP2-208ENST00000491075 PI4KBQ9UBF8 816 aa25.44■■□□□ 1.66
CLIP2-208ENST00000491075 LRP2BPQ9P2M1 347 aa25.43■■□□□ 1.66
CLIP2-208ENST00000491075 ASNSP08243 561 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 UQCRFS1P1P0C7P4 283 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 MCAMP43121 646 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 TRIM32Q13049 653 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 MTMR2Q13614 643 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 SH3RF3Q8TEJ3 882 aaPredicted RBP25.42■■□□□ 1.66
CLIP2-208ENST00000491075 SOCS4Q8WXH5 440 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 TRIB2Q92519 343 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 TMOD4Q9NZQ9 345 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 A0A0C4DFX4 3053 aa25.42■■□□□ 1.66
CLIP2-208ENST00000491075 PLCG2P16885 1265 aa25.41■■□□□ 1.66
CLIP2-208ENST00000491075 HOXA7P31268 230 aaPredicted RBP25.41■■□□□ 1.66
CLIP2-208ENST00000491075 RARSP54136 660 aaKnown RBP25.41■■□□□ 1.66
CLIP2-208ENST00000491075 BACE1P56817 501 aa25.41■■□□□ 1.66
CLIP2-208ENST00000491075 GPR153Q6NV75 609 aa25.41■■□□□ 1.66
CLIP2-208ENST00000491075 C11orf49Q9H6J7 331 aa25.41■■□□□ 1.66
CLIP2-208ENST00000491075 OGDHLQ9ULD0 1010 aa25.41■■□□□ 1.66
CLIP2-208ENST00000491075 ZMYND8Q9ULU4 1186 aaPredicted RBP25.41■■□□□ 1.66
CLIP2-208ENST00000491075 BAG3O95817 575 aa25.4■■□□□ 1.66
CLIP2-208ENST00000491075 MNX1P50219 401 aaPredicted RBP25.4■■□□□ 1.66
CLIP2-208ENST00000491075 MAP3K21Q5TCX8 1036 aa25.4■■□□□ 1.66
CLIP2-208ENST00000491075 NUDT12Q9BQG2 462 aa25.4■■□□□ 1.66
CLIP2-208ENST00000491075 DLL1O00548 723 aa25.39■■□□□ 1.66
CLIP2-208ENST00000491075 XRCC5P13010 732 aaKnown RBP25.39■■□□□ 1.66
CLIP2-208ENST00000491075 NAA16Q6N069 864 aaPredicted RBP25.39■■□□□ 1.66
CLIP2-208ENST00000491075 GINM1Q9NU53 330 aa25.39■■□□□ 1.66
CLIP2-208ENST00000491075 C19orf81C9J6K1 198 aa25.38■■□□□ 1.65
CLIP2-208ENST00000491075 PRKAR2AP13861 404 aaKnown RBP25.38■■□□□ 1.65
CLIP2-208ENST00000491075 CYP2B6P20813 491 aa25.38■■□□□ 1.65
CLIP2-208ENST00000491075 HERVK_113P62684 666 aa25.38■■□□□ 1.65
CLIP2-208ENST00000491075 G3BP1Q13283 466 aaKnown RBP eCLIP25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms