RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 GJB2P29033 226 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 ME3Q16798 604 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 KIF4BQ2VIQ3 1234 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 BRF1Q92994 677 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 TEKT1Q969V4 418 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 ATP8A2Q9NTI2 1148 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 TPCN1Q9ULQ1 816 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 TTF2Q9UNY4 1162 aaKnown RBP12.05□□□□□ -0.48
HDAC3-210ENST00000490808 ZBTB12Q9Y330 459 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-210ENST00000490808 COL1A1P02452 1464 aaPredicted RBP12.05□□□□□ -0.48
HDAC3-210ENST00000490808 TRPM7Q96QT4 1865 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 PASKQ96RG2 1323 aa12.05□□□□□ -0.48
HDAC3-210ENST00000490808 GSG1L2A8MUP6 293 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 PRC1O43663 620 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 STX6O43752 255 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 PFKFB2O60825 505 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 BAG4O95429 457 aaKnown RBP12.04□□□□□ -0.48
HDAC3-210ENST00000490808 HSPA8P11142 646 aaKnown RBP12.04□□□□□ -0.48
HDAC3-210ENST00000490808 PLCG2P16885 1265 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 HAND2P61296 217 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 DLGAP5Q15398 846 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 AKNAD1Q5T1N1 836 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 CPLX2Q6PUV4 134 aaKnown RBP12.04□□□□□ -0.48
HDAC3-210ENST00000490808 SYNE3Q6ZMZ3 975 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 KIAA0825Q8IV33 1275 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 FAM184AQ8NB25 1140 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 GTF3C6Q969F1 213 aa12.04□□□□□ -0.48
HDAC3-210ENST00000490808 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
HDAC3-210ENST00000490808 FAM163AQ96GL9 167 aaPredicted RBP12.04□□□□□ -0.48
HDAC3-210ENST00000490808 EVCP57679 992 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 MECOMQ03112 1051 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 TNFAIP1Q13829 316 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 EAPPQ56P03 285 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-210ENST00000490808 FKBP1CQ5VVH2 108 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 LARP1BQ659C4 914 aaKnown RBP12.03□□□□□ -0.48
HDAC3-210ENST00000490808 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 CDC37L1Q7L3B6 337 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 APOBEC3FQ8IUX4 373 aaKnown RBP12.03□□□□□ -0.48
HDAC3-210ENST00000490808 LCORLQ8N3X6 602 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 CERS5Q8N5B7 392 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 STAG1Q8WVM7 1258 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 DCPSQ96C86 337 aaKnown RBP12.03□□□□□ -0.48
HDAC3-210ENST00000490808 ZBED3Q96IU2 234 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-210ENST00000490808 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 ANAPC4Q9UJX5 808 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 NAP1L2Q9ULW6 460 aaPredicted RBP12.03□□□□□ -0.48
HDAC3-210ENST00000490808 PPP2R3BQ9Y5P8 575 aa12.03□□□□□ -0.48
HDAC3-210ENST00000490808 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 FOXP2O15409 715 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 CDKL5O76039 1030 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-210ENST00000490808 DEFB115Q30KQ5 88 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 MB21D2Q8IYB1 491 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-210ENST00000490808 MIGA1Q8NAN2 632 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 RGS22Q8NE09 1264 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 ESR2Q92731 530 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 TCEANC2Q96MN5 208 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 ZNF287Q9HBT7 754 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 ARPP21Q9UBL0 812 aaPredicted RBP12.02□□□□□ -0.49
HDAC3-210ENST00000490808 ANGEL1Q9UNK9 670 aaKnown RBP12.02□□□□□ -0.49
HDAC3-210ENST00000490808 CLEC11AQ9Y240 323 aa12.02□□□□□ -0.49
HDAC3-210ENST00000490808 WNT10BO00744 389 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 CPLX1O14810 134 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 TRAK2O60296 914 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 ITGBL1O95965 494 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-210ENST00000490808 SYT1P21579 422 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 LIFRP42702 1097 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 CRKP46108 304 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 MAP2K1Q02750 393 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-210ENST00000490808 PDE4BQ07343 736 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 PPARAQ07869 468 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 STK3Q13188 491 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 CFAP100Q494V2 611 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 TBC1D10BQ4KMP7 808 aaPredicted RBP12.01□□□□□ -0.49
HDAC3-210ENST00000490808 CCDC178Q5BJE1 867 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 MCTP1Q6DN14 999 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 NFXL1Q6ZNB6 911 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 SULF1Q8IWU6 871 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 RIOK1Q9BRS2 568 aaKnown RBP12.01□□□□□ -0.49
HDAC3-210ENST00000490808 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
HDAC3-210ENST00000490808 TOMM22Q9NS69 142 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 TMOD2Q9NZR1 351 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 TAF6LQ9Y6J9 622 aa12.01□□□□□ -0.49
HDAC3-210ENST00000490808 CCDC69A6NI79 296 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 H3BQV1 296 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 LARGE1O95461 756 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 PRDX5P30044 214 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 USP5P45974 858 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 TNNI2P48788 182 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 RGS19P49795 217 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 RBM5P52756 815 aaKnown RBP eCLIP12□□□□□ -0.49
HDAC3-210ENST00000490808 PPP4CP60510 307 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 APOBRQ0VD83 1088 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 GSE1Q14687 1217 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 PPP2R5BQ15173 497 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 SAMD7Q7Z3H4 446 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 NECAB1Q8N987 351 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 TRPM4Q8TD43 1214 aa12□□□□□ -0.49
HDAC3-210ENST00000490808 HOOK2Q96ED9 719 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms