RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 MYH7P12883 1935 aa18.6■□□□□ 0.57
VPS26A-207ENST00000490696 SIPA1L1O43166 1804 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 TESPA1A2RU30 521 aaPredicted RBP18.59■□□□□ 0.57
VPS26A-207ENST00000490696 FAM196BA6NMK8 535 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 PDE1AP54750 535 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 NUCB1Q02818 461 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 PPIL2Q13356 520 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 ZSCAN25Q6NSZ9 544 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 METTL16Q86W50 562 aaKnown RBP18.59■□□□□ 0.57
VPS26A-207ENST00000490696 LCORLQ8N3X6 602 aa18.59■□□□□ 0.57
VPS26A-207ENST00000490696 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.59■□□□□ 0.57
VPS26A-207ENST00000490696 SAP30BPQ9UHR5 308 aaKnown RBP18.59■□□□□ 0.57
VPS26A-207ENST00000490696 HERC5Q9UII4 1024 aaKnown RBP18.59■□□□□ 0.57
VPS26A-207ENST00000490696 IRF6O14896 467 aa18.58■□□□□ 0.56
VPS26A-207ENST00000490696 CTNND1O60716 968 aaKnown RBP18.58■□□□□ 0.56
VPS26A-207ENST00000490696 PPATQ06203 517 aa18.58■□□□□ 0.56
VPS26A-207ENST00000490696 CHD1LQ86WJ1 897 aa18.58■□□□□ 0.56
VPS26A-207ENST00000490696 IFNL1Q8IU54 200 aa18.58■□□□□ 0.56
VPS26A-207ENST00000490696 SCYL3Q8IZE3 742 aa18.58■□□□□ 0.56
VPS26A-207ENST00000490696 CRNKL1Q9BZJ0 848 aaKnown RBP18.58■□□□□ 0.56
VPS26A-207ENST00000490696 IGF2BP3O00425 579 aaKnown RBP eCLIP18.57■□□□□ 0.56
VPS26A-207ENST00000490696 MBD4O95243 580 aa18.57■□□□□ 0.56
VPS26A-207ENST00000490696 GTF2A2P52657 109 aa18.57■□□□□ 0.56
VPS26A-207ENST00000490696 FOXP4Q8IVH2 680 aaPredicted RBP18.57■□□□□ 0.56
VPS26A-207ENST00000490696 PTPN18Q99952 460 aa18.57■□□□□ 0.56
VPS26A-207ENST00000490696 DNAJC18Q9H819 358 aa18.57■□□□□ 0.56
VPS26A-207ENST00000490696 ARMT1Q9H993 441 aa18.57■□□□□ 0.56
VPS26A-207ENST00000490696 PTPRAP18433 802 aa18.56■□□□□ 0.56
VPS26A-207ENST00000490696 RRP1BQ14684 758 aaKnown RBP18.56■□□□□ 0.56
VPS26A-207ENST00000490696 SDR42E1Q8WUS8 393 aa18.56■□□□□ 0.56
VPS26A-207ENST00000490696 BRI3BPQ8WY22 251 aa18.56■□□□□ 0.56
VPS26A-207ENST00000490696 CFHR5Q9BXR6 569 aa18.56■□□□□ 0.56
VPS26A-207ENST00000490696 PUS7LQ9H0K6 701 aaKnown RBP18.56■□□□□ 0.56
VPS26A-207ENST00000490696 KCNH4Q9UQ05 1017 aa18.56■□□□□ 0.56
VPS26A-207ENST00000490696 MYH1P12882 1939 aa18.56■□□□□ 0.56
VPS26A-207ENST00000490696 DDX60LQ5H9U9 1706 aaKnown RBP18.55■□□□□ 0.56
VPS26A-207ENST00000490696 CCL15-CCL14A0A0B4J2E2 113 aa18.55■□□□□ 0.56
VPS26A-207ENST00000490696 RNF113AO15541 343 aaKnown RBP18.55■□□□□ 0.56
VPS26A-207ENST00000490696 ALDH1A1P00352 501 aa18.55■□□□□ 0.56
VPS26A-207ENST00000490696 HLA-DOAP06340 250 aa18.55■□□□□ 0.56
VPS26A-207ENST00000490696 ZFYP08048 801 aaPredicted RBP18.55■□□□□ 0.56
VPS26A-207ENST00000490696 CCL15Q16663 113 aa18.55■□□□□ 0.56
VPS26A-207ENST00000490696 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
VPS26A-207ENST00000490696 DCP1AQ9NPI6 582 aaPredicted RBP18.55■□□□□ 0.56
VPS26A-207ENST00000490696 PICK1Q9NRD5 415 aa18.55■□□□□ 0.56
VPS26A-207ENST00000490696 DOCK1Q14185 1865 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 PRKAB2O43741 272 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 TBC1D8O95759 1140 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 CAP2P40123 477 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 SNAPC2Q13487 334 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 CRACR2BQ8N4Y2 399 aaPredicted RBP18.54■□□□□ 0.56
VPS26A-207ENST00000490696 APPBP2Q92624 585 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 OSBP2Q969R2 916 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 EHD4Q9H223 541 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 RNF39Q9H2S5 420 aa18.54■□□□□ 0.56
VPS26A-207ENST00000490696 CETPP11597 493 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 PLCD1P51178 756 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 TTC6Q86TZ1 520 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 PLEKHM2Q8IWE5 1019 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 NAV1Q8NEY1 1877 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 FSD1Q9BTV5 496 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 R3HDMLQ9H3Y0 253 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 ATP8A2Q9NTI2 1148 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 PCDH10Q9P2E7 1040 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.53■□□□□ 0.56
VPS26A-207ENST00000490696 SERPINB13Q9UIV8 391 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 ZHX2Q9Y6X8 837 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 CASP8AP2Q9UKL3 1982 aa18.53■□□□□ 0.56
VPS26A-207ENST00000490696 CXCL11O14625 94 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 LRRFIP1Q32MZ4 808 aaKnown RBP18.52■□□□□ 0.56
VPS26A-207ENST00000490696 OTUD7BQ6GQQ9 843 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 FAM43AQ8N2R8 423 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 STRBPQ96SI9 672 aaKnown RBP18.52■□□□□ 0.56
VPS26A-207ENST00000490696 TRIM34Q9BYJ4 488 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 OSBPL3Q9H4L5 887 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 MCM9Q9NXL9 1143 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 AFG3L2Q9Y4W6 797 aa18.52■□□□□ 0.56
VPS26A-207ENST00000490696 PHIPQ8WWQ0 1821 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 POLR3DP05423 398 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-207ENST00000490696 EVX2Q03828 476 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 GABPAQ06546 454 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 MOGSQ13724 837 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 NOM1Q5C9Z4 860 aaKnown RBP18.51■□□□□ 0.55
VPS26A-207ENST00000490696 CCDC84Q86UT8 332 aaPredicted RBP18.51■□□□□ 0.55
VPS26A-207ENST00000490696 EVI5LQ96CN4 794 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 ABHD8Q96I13 439 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 SLC4A4Q9Y6R1 1079 aa18.51■□□□□ 0.55
VPS26A-207ENST00000490696 BTBD19C9JJ37 291 aa18.5■□□□□ 0.55
VPS26A-207ENST00000490696 M0R2C6 588 aa18.5■□□□□ 0.55
VPS26A-207ENST00000490696 JAG1P78504 1218 aa18.5■□□□□ 0.55
VPS26A-207ENST00000490696 TATDN1Q6P1N9 297 aa18.5■□□□□ 0.55
VPS26A-207ENST00000490696 ATAD5Q96QE3 1844 aa18.49■□□□□ 0.55
VPS26A-207ENST00000490696 A0A0G2JLL6 359 aaPredicted RBP18.49■□□□□ 0.55
VPS26A-207ENST00000490696 GPR25O00155 361 aa18.49■□□□□ 0.55
VPS26A-207ENST00000490696 GPAA1O43292 621 aa18.49■□□□□ 0.55
VPS26A-207ENST00000490696 CYP2D6P10635 497 aa18.49■□□□□ 0.55
VPS26A-207ENST00000490696 CRHR2Q13324 411 aa18.49■□□□□ 0.55
VPS26A-207ENST00000490696 SHROOM1Q2M3G4 852 aaPredicted RBP18.49■□□□□ 0.55
VPS26A-207ENST00000490696 ZMYM1Q5SVZ6 1142 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms