RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 CHRNA5P30532 468 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 ITPK1Q13572 414 aa16.37■□□□□ 0.21
ARHGEF39-205ENST00000490638 TNKSO95271 1327 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 CCP110O43303 1012 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 ARID4AP29374 1257 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 PODNQ7Z5L7 613 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 TXLNBQ8N3L3 684 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 DESP17661 470 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 RILPL1Q5EBL4 403 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 PIK3AP1Q6ZUJ8 805 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 TRIM47Q96LD4 638 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZMYM1Q5SVZ6 1142 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 GPHNQ9NQX3 736 aaPredicted RBP16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 BRPF3Q9ULD4 1205 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 PALD1Q9ULE6 856 aa16.36■□□□□ 0.21
ARHGEF39-205ENST00000490638 GADL1Q6ZQY3 521 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 LINC00116Q8NCU8 138 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 PLIN2Q99541 437 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 TM6SF1Q9BZW5 370 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 DACT1Q9NYF0 836 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 USP8P40818 1118 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 SIRT2Q8IXJ6 389 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 FAM43AQ8N2R8 423 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 CD209Q9NNX6 404 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 RMND1Q9NWS8 449 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 FER1L4A9Z1Z3 1794 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 CPDO75976 1380 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 CDHR2Q9BYE9 1310 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 VWA3AA6NCI4 1184 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 SSR1P43307 286 aaKnown RBP16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 NAP1L4Q99733 375 aaKnown RBP16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 LLPHQ9BRT6 129 aaKnown RBP16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZNF277Q9NRM2 450 aaPredicted RBP16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 RNF181Q9P0P0 153 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 NOD1Q9Y239 953 aa16.35■□□□□ 0.21
ARHGEF39-205ENST00000490638 CD163L1Q9NR16 1453 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 A0A0G2JLW4 131 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 PABPC4Q13310 644 aaKnown RBP eCLIP16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 EZH2Q15910 746 aaKnown RBP16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 ZSCAN10Q96SZ4 725 aaPredicted RBP16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 ALAS1P13196 640 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 ADD2P35612 726 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 POLA2Q14181 598 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 FLOT1O75955 427 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 SFPQP23246 707 aaKnown RBP eCLIP16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 ADCY7P51828 1080 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 SLFN13Q68D06 897 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 GIMAP6Q6P9H5 292 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 CPLX3Q8WVH0 158 aa16.34■□□□□ 0.21
ARHGEF39-205ENST00000490638 KLRF2D3W0D1 207 aa16.33■□□□□ 0.21
ARHGEF39-205ENST00000490638 NOP56O00567 594 aaKnown RBP16.33■□□□□ 0.21
ARHGEF39-205ENST00000490638 CHMP2AO43633 222 aa16.33■□□□□ 0.21
ARHGEF39-205ENST00000490638 NCBP1Q09161 790 aaKnown RBP16.33■□□□□ 0.21
ARHGEF39-205ENST00000490638 VPS36Q86VN1 386 aa16.33■□□□□ 0.21
ARHGEF39-205ENST00000490638 STX1AQ16623 288 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 TOP1P11387 765 aaKnown RBP16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 NONOQ15233 471 aaKnown RBP eCLIP16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 IQUBQ8NA54 791 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 PRKAB2O43741 272 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 AOC3Q16853 763 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
ARHGEF39-205ENST00000490638 FAM13AO94988 1023 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 GOLGA8HP0CJ92 632 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 PRDX5P30044 214 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 ADD1P35611 737 aaKnown RBP16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 MECOMQ03112 1051 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 TDRD12Q587J7 1177 aaKnown RBP16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 REXO1Q8N1G1 1221 aaKnown RBP16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 OSBPL3Q9H4L5 887 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 PSMA7O14818 248 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 TXKP42681 527 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 SLC15A2Q16348 729 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 FAM173BQ6P4H8 233 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 KIAA1328Q86T90 577 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 FANCBQ8NB91 859 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 GINS2Q9Y248 185 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 MYO3AQ8NEV4 1616 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 GPS2Q13227 327 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 MTX1Q13505 466 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 TBC1D10BQ4KMP7 808 aaPredicted RBP16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 ARHGAP29Q52LW3 1261 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 HS2ST1Q7LGA3 356 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
ARHGEF39-205ENST00000490638 SPDYE4A6NLX3 237 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 KRT40Q6A162 431 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 MIGA2Q7L4E1 593 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 CMTR1Q8N1G2 835 aaKnown RBP16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 OSBP2Q969R2 916 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 DHX36Q9H2U1 1008 aaKnown RBP16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 KCNJ14Q9UNX9 436 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 LCORLQ8N3X6 602 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 PI4KBQ9UBF8 816 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 LRRC7Q96NW7 1537 aa16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 FRMPD2Q68DX3 1309 aaPredicted RBP16.31■□□□□ 0.2
ARHGEF39-205ENST00000490638 CAMTA2O94983 1202 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms