RNA–Protein interactions for RNA: ENST00000490475.1

TTC28-207, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 5

Gene TTC28, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-207ENST00000490475 GINM1Q9NU53 330 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 DDX19BQ9UMR2 479 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.67□□□□□ -0.38
TTC28-207ENST00000490475 FPGT-TNNI3KV9GXZ4 949 aa12.67□□□□□ -0.38
TTC28-207ENST00000490475 MYPNQ86TC9 1320 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 SURF6O75683 361 aaKnown RBP12.66□□□□□ -0.38
TTC28-207ENST00000490475 BCRP11274 1271 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 EN2P19622 333 aaPredicted RBP12.66□□□□□ -0.38
TTC28-207ENST00000490475 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
TTC28-207ENST00000490475 HSP90AB4PQ58FF6 505 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 GPAT2Q6NUI2 795 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 GADL1Q6ZQY3 521 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 ERC1Q8IUD2 1116 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 TEX11Q8IYF3 940 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 SLAIN1Q8ND83 568 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 ARHGAP39Q9C0H5 1083 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 AGTPBP1Q9UPW5 1226 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 NOP58Q9Y2X3 529 aaKnown RBP12.66□□□□□ -0.38
TTC28-207ENST00000490475 MAST2Q6P0Q8 1798 aa12.66□□□□□ -0.38
TTC28-207ENST00000490475 MGAMO43451 1857 aa12.65□□□□□ -0.38
TTC28-207ENST00000490475 OSBPP22059 807 aa12.65□□□□□ -0.38
TTC28-207ENST00000490475 GCLCP48506 637 aaPredicted RBP12.65□□□□□ -0.38
TTC28-207ENST00000490475 PPP4CP60510 307 aa12.65□□□□□ -0.38
TTC28-207ENST00000490475 CAP1Q01518 475 aa12.65□□□□□ -0.38
TTC28-207ENST00000490475 FOXP4Q8IVH2 680 aaPredicted RBP12.65□□□□□ -0.38
TTC28-207ENST00000490475 TRIM34Q9BYJ4 488 aa12.65□□□□□ -0.38
TTC28-207ENST00000490475 CHMP4BQ9H444 224 aaKnown RBP12.65□□□□□ -0.38
TTC28-207ENST00000490475 PHIPQ8WWQ0 1821 aa12.65□□□□□ -0.39
TTC28-207ENST00000490475 TRIM75PA6NK02 468 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 ASNSP08243 561 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 CYP2C8P10632 490 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 CAP2P40123 477 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 PI16Q6UXB8 463 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 TBC1D9Q6ZT07 1266 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 ZNF280CQ8ND82 737 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 PXYLP1Q8TE99 480 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 SH3TC2Q8TF17 1288 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 ZNF384Q8TF68 577 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 COA7Q96BR5 231 aa12.64□□□□□ -0.39
TTC28-207ENST00000490475 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
TTC28-207ENST00000490475 HLA-DOAP06340 250 aa12.63□□□□□ -0.39
TTC28-207ENST00000490475 GJB1P08034 283 aa12.63□□□□□ -0.39
TTC28-207ENST00000490475 IRF5Q13568 498 aa12.63□□□□□ -0.39
TTC28-207ENST00000490475 FAM110CQ1W6H9 321 aa12.63□□□□□ -0.39
TTC28-207ENST00000490475 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 C19orf81C9J6K1 198 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 TNPO2O14787 897 aaKnown RBP12.62□□□□□ -0.39
TTC28-207ENST00000490475 GJA8P48165 433 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 SPP2Q13103 211 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 SH3D19Q5HYK7 790 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 RPAP2Q8IXW5 612 aaPredicted RBP12.62□□□□□ -0.39
TTC28-207ENST00000490475 CRACR2BQ8N4Y2 399 aaPredicted RBP12.62□□□□□ -0.39
TTC28-207ENST00000490475 GTF3C2Q8WUA4 911 aaPredicted RBP12.62□□□□□ -0.39
TTC28-207ENST00000490475 DBNDD2Q9BQY9 259 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 HTATIP2Q9BUP3 242 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 AATFQ9NY61 560 aaKnown RBP eCLIP12.62□□□□□ -0.39
TTC28-207ENST00000490475 FOCADQ5VW36 1801 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 CEP290O15078 2479 aa12.62□□□□□ -0.39
TTC28-207ENST00000490475 ZSWIM8A7E2V4 1837 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 HMMRO75330 724 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 CYP2E1P05181 493 aaPredicted RBP12.61□□□□□ -0.39
TTC28-207ENST00000490475 PRKCZQ05513 592 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 MAP3K12Q12852 859 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
TTC28-207ENST00000490475 METTL16Q86W50 562 aaKnown RBP12.61□□□□□ -0.39
TTC28-207ENST00000490475 SH3RF3Q8TEJ3 882 aaPredicted RBP12.61□□□□□ -0.39
TTC28-207ENST00000490475 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 RNF208Q9H0X6 261 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 TMOD4Q9NZQ9 345 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 EXOC6BQ9Y2D4 811 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 SUPT16HQ9Y5B9 1047 aaKnown RBP12.61□□□□□ -0.39
TTC28-207ENST00000490475 LOC285556D6RIA3 1793 aa12.61□□□□□ -0.39
TTC28-207ENST00000490475 MKI67P46013 3256 aaKnown RBP12.61□□□□□ -0.39
TTC28-207ENST00000490475 ADCY3O60266 1144 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 CCL5P13501 91 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 CTGFP29279 349 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 ZAP70P43403 619 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
TTC28-207ENST00000490475 ANKRD13CQ8N6S4 541 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 CRBNQ96SW2 442 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 FLT1P17948 1338 aa12.6□□□□□ -0.39
TTC28-207ENST00000490475 IDH1O75874 414 aaKnown RBP12.59□□□□□ -0.39
TTC28-207ENST00000490475 MYCP01106 439 aaPredicted RBP12.59□□□□□ -0.39
TTC28-207ENST00000490475 CYP7A1P22680 504 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 HOXA7P31268 230 aaPredicted RBP12.59□□□□□ -0.39
TTC28-207ENST00000490475 FLT3LGP49771 235 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 HMGCS2P54868 508 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 BACE1P56817 501 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 HABP4Q5JVS0 413 aaKnown RBP12.59□□□□□ -0.39
TTC28-207ENST00000490475 TTC6Q86TZ1 520 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 DBNLQ9UJU6 430 aaKnown RBP12.59□□□□□ -0.39
TTC28-207ENST00000490475 TAOK2Q9UL54 1235 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 CDK5RAP2Q96SN8 1893 aa12.59□□□□□ -0.39
TTC28-207ENST00000490475 BRCA2P51587 3418 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms