RNA–Protein interactions for RNA: ENST00000490192.1

TM9SF3-206, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 4

Gene TM9SF3, Length 884 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-206ENST00000490192 PCDH1Q08174 1060 aa8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 SSRP1Q08945 709 aaKnown RBP8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 HSP90AB2PQ58FF8 381 aa8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 ELMSAN1Q6PJG2 1045 aa8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 C6orf15Q6UXA7 325 aaPredicted RBP8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 BSNDQ8WZ55 320 aa8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 SLC52A1Q9NWF4 448 aa8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 ZMYM5Q9UJ78 669 aa8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 POLR3KQ9Y2Y1 108 aaPredicted RBP8.93□□□□□ -0.98
TM9SF3-206ENST00000490192 A0A1W2PQH9 124 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 FAM229AH3BQW9 127 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 B3GALT4O96024 378 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 ARNTP27540 789 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 COL9A3Q14050 684 aaPredicted RBP8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 ZNF423Q2M1K9 1284 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 FAM178BQ8IXR5 827 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 C19orf47Q8N9M1 422 aaKnown RBP8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 TYW1Q9NV66 732 aaKnown RBP8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 CD2APQ9Y5K6 639 aa8.92□□□□□ -0.98
TM9SF3-206ENST00000490192 ATE1O95260 518 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 GHRHP01286 108 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 VIL1P09327 827 aaKnown RBP8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 PTPN11Q06124 597 aaPredicted RBP8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 DALRD3Q5D0E6 543 aaKnown RBP8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 CEP135Q66GS9 1140 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 TTC6Q86TZ1 520 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 ST13P5Q8NFI4 369 aaPredicted RBP8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 EMILIN2Q9BXX0 1053 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 RBSNQ9H1K0 784 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 ANTXR1Q9H6X2 564 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 FAN1Q9Y2M0 1017 aa8.91□□□□□ -0.98
TM9SF3-206ENST00000490192 ADAM23O75077 832 aa8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 SMNDC1O75940 238 aaKnown RBP eCLIP8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 FURINP09958 794 aa8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 AFF1P51825 1210 aaKnown RBP8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 C21orf62-AS1Q17RA5 79 aa8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 MRM1Q6IN84 353 aaKnown RBP8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 KRT26Q7Z3Y9 468 aa8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 SYNPOQ8N3V7 929 aa8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 FRRS1LQ9P0K9 344 aa8.9□□□□□ -0.98
TM9SF3-206ENST00000490192 C9orf172C9J069 976 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 GRIK4Q16099 956 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 MPRIPQ6WCQ1 1025 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 VN1R5Q7Z5H4 357 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 FERMT3Q86UX7 667 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 DMRTC2Q8IXT2 367 aaPredicted RBP8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 JDP2Q8WYK2 163 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 NAGPAQ9UK23 515 aa8.89□□□□□ -0.99
TM9SF3-206ENST00000490192 A0A0A0MRY4 1105 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 ELNP15502 786 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 EIF2AK2P19525 551 aaKnown RBP8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 GUCY2CP25092 1073 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 ZNF252P-AS1Q0IIN9 211 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 PERM1Q5SV97 790 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 ADAMTSL4Q6UY14 1074 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 ZNF669Q96BR6 464 aaPredicted RBP8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 IER2Q9BTL4 223 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 HOMER2Q9NSB8 354 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 SOX13Q9UN79 622 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 PLAAQ9Y263 795 aa8.88□□□□□ -0.99
TM9SF3-206ENST00000490192 UPK3BL1B0FP48 263 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 UPK3BL2E5RIL1 263 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 CNGA1P29973 690 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 DOC2BQ14184 412 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 ODR4Q5SWX8 454 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 MSL1Q68DK7 614 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 WFDC8Q8IUA0 241 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 FMNL3Q8IVF7 1028 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 DHX37Q8IY37 1157 aaKnown RBP8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 ZSWIM2Q8NEG5 633 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 TM9SF2Q99805 663 aa8.87□□□□□ -0.99
TM9SF3-206ENST00000490192 MEIS3P2A8K0S8 358 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 FAM153BP0C7A2 387 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 CDK8P49336 464 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 EVA1CP58658 441 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 NRG1Q02297 640 aaPredicted RBP8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 LRRFIP1Q32MZ4 808 aaKnown RBP8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 TMEM67Q5HYA8 995 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 MAP1SQ66K74 1059 aaPredicted RBP8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 EEPD1Q7L9B9 569 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 JAMLQ86YT9 394 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 PRPF38AQ8NAV1 312 aaKnown RBP8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 TTC9Q92623 222 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 LPIN3Q9BQK8 851 aa8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 SMG9Q9H0W8 520 aaKnown RBP8.86□□□□□ -0.99
TM9SF3-206ENST00000490192 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 ESRRAP11474 423 aaPredicted RBP8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 PTPRAP18433 802 aa8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 CDKN1CP49918 316 aaPredicted RBP8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 SCARA3Q6AZY7 606 aa8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 PDZD3Q86UT5 571 aa8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 TMEM40Q8WWA1 233 aa8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 CEP89Q96ST8 783 aa8.85□□□□□ -0.99
TM9SF3-206ENST00000490192 HTR3BO95264 441 aa8.84□□□□□ -0.99
TM9SF3-206ENST00000490192 TM4SF20Q53R12 229 aa8.84□□□□□ -0.99
TM9SF3-206ENST00000490192 HGSNATQ68CP4 663 aa8.84□□□□□ -0.99
TM9SF3-206ENST00000490192 DTWD1Q8N5C7 304 aa8.84□□□□□ -0.99
TM9SF3-206ENST00000490192 SPATA9Q9BWV2 254 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms