RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 TSR2Q969E8 191 aaKnown RBP3.97□□□□□ -1.77
UBXN4-208ENST00000490163 GJA10Q969M2 543 aa3.97□□□□□ -1.77
UBXN4-208ENST00000490163 OSBP2Q969R2 916 aa3.97□□□□□ -1.77
UBXN4-208ENST00000490163 PPP4R2Q9NY27 417 aa3.97□□□□□ -1.77
UBXN4-208ENST00000490163 GMIPQ9P107 970 aa3.97□□□□□ -1.77
UBXN4-208ENST00000490163 SLC22A31A6NKX4 558 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 ZBTB42B2RXF5 422 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 SUSD5O60279 629 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 BRINP1O60477 761 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 ARNTP27540 789 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 ECE1P42892 770 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 NRLP54845 237 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 IFRD2Q12894 506 aaPredicted RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 MOGSQ13724 837 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 GTF2H3Q13889 308 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 AHI1Q8N157 1196 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 SNIP1Q8TAD8 396 aaKnown RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 MCM8Q9UJA3 840 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 SOS2Q07890 1332 aaPredicted RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 MYL1P05976 194 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 MTMR1Q13613 665 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 SIM2Q14190 667 aaPredicted RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 FAM83BQ5T0W9 1011 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 TTC39BQ5VTQ0 682 aaPredicted RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 PPM1KQ8N3J5 372 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 PCDHB5Q9Y5E4 795 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 SHTN1A0MZ66 631 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 ASLP04424 464 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 BIRC2Q13490 618 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 OTOP1Q7RTM1 612 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 SMARCC1Q92922 1105 aaPredicted RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 WNT8BQ93098 351 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 CEP63Q96MT8 703 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 HHIPQ96QV1 700 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 PTPN18Q99952 460 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 EHD4Q9H223 541 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 BRMS1Q9HCU9 246 aa3.96□□□□□ -1.78
UBXN4-208ENST00000490163 MRPS23Q9Y3D9 190 aaKnown RBP3.96□□□□□ -1.78
UBXN4-208ENST00000490163 PEX14O75381 377 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 FBXO21O94952 628 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 AVPP01185 164 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 AKAP5P24588 427 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 HDAC1Q13547 482 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 CCDC85BQ15834 202 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 PJA1Q8NG27 643 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 STK35Q8TDR2 534 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 ATG4CQ96DT6 458 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 RCC1LQ96I51 464 aaKnown RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 OBP2AQ9NY56 170 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 FRRS1LQ9P0K9 344 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 TNKSO95271 1327 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 A0A1B0GTH6 734 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 GDF9O60383 454 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 CYP2E1P05181 493 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 LMNB1P20700 586 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 COPS2P61201 443 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 CWF19L2Q2TBE0 894 aaKnown RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 SYDE2Q5VT97 1194 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 ADAMTSL4Q6UY14 1074 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 UNC5AQ6ZN44 842 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 TTC6Q86TZ1 520 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 ZSCAN18Q8TBC5 510 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 TARS2Q9BW92 718 aaKnown RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 EMILIN2Q9BXX0 1053 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 IRX2Q9BZI1 471 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 CRTAC1Q9NQ79 661 aa3.95□□□□□ -1.78
UBXN4-208ENST00000490163 GDF2Q9UK05 429 aaPredicted RBP3.95□□□□□ -1.78
UBXN4-208ENST00000490163 XYLBO75191 536 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 SCGB1D2O95969 90 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 ALDH5A1P51649 535 aaPredicted RBP3.94□□□□□ -1.78
UBXN4-208ENST00000490163 TNP2Q05952 138 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 CCINQ13939 588 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 LRRC14Q15048 493 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 PPP2R5AQ15172 486 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 KIF4BQ2VIQ3 1234 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 PPT2Q9UMR5 302 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 DYRK1BQ9Y463 629 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 A0A096LPE4 126 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 A0A1W2PPZ6 126 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 IQCA1LA6NCM1 817 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 PDE8AO60658 829 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 SEPT7Q16181 437 aaKnown RBP3.94□□□□□ -1.78
UBXN4-208ENST00000490163 GRIK5Q16478 980 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 LHFPL2Q6ZUX7 228 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 KIFC2Q96AC6 838 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 KLHL11Q9NVR0 708 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 CABP1Q9NZU7 370 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 ZNF423Q2M1K9 1284 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 HABP4Q5JVS0 413 aaKnown RBP3.94□□□□□ -1.78
UBXN4-208ENST00000490163 MYO1HQ8N1T3 1032 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 PPP1R13LQ8WUF5 828 aa3.94□□□□□ -1.78
UBXN4-208ENST00000490163 ADARB2-AS1A8MUL3 147 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 DNAJA2O60884 412 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 SUMO1P63165 101 aaKnown RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 PRR18Q8N4B5 295 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 EMC9Q9Y3B6 208 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 TOP2AP11388 1531 aaKnown RBP3.93□□□□□ -1.78
UBXN4-208ENST00000490163 PRRT4C9JH25 899 aa3.93□□□□□ -1.78
UBXN4-208ENST00000490163 CD2BP2O95400 341 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms