RNA–Protein interactions for RNA: ENST00000490061.3

RN7SL239P-201, Transcript of RNA, 7SL, cytoplasmic 239, pseudogene, humanhuman

BASIC

Gene RN7SL239P, Length 300 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL239P-201ENST00000490061 ZNF280CQ8ND82 737 aa10.58□□□□□ -0.72
RN7SL239P-201ENST00000490061 GPRC5AQ8NFJ5 357 aa10.58□□□□□ -0.72
RN7SL239P-201ENST00000490061 APBA2Q99767 749 aa10.58□□□□□ -0.72
RN7SL239P-201ENST00000490061 FAM198AQ9UFP1 575 aa10.58□□□□□ -0.72
RN7SL239P-201ENST00000490061 MYH13Q9UKX3 1938 aa10.58□□□□□ -0.72
RN7SL239P-201ENST00000490061 MAST2Q6P0Q8 1798 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 PHIPQ8WWQ0 1821 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 DNM1LO00429 736 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 SLC5A1P13866 664 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 CYP2B6P20813 491 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 HOXA7P31268 230 aaPredicted RBP10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 IRX3P78415 501 aaPredicted RBP10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 CACNB2Q08289 660 aaPredicted RBP10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 NFIAQ12857 509 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 C1orf53Q5VUE5 145 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 MFSD14CQ5VZR4 134 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 G2E3Q7L622 706 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 ARRDC4Q8NCT1 418 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 MYLIPQ8WY64 445 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 LPIN2Q92539 896 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 LPAR1Q92633 364 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 GINM1Q9NU53 330 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 IQSEC3Q9UPP2 1182 aaPredicted RBP10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 LOC285556D6RIA3 1793 aa10.57□□□□□ -0.72
RN7SL239P-201ENST00000490061 C19orf81C9J6K1 198 aa10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 CCNA1P78396 465 aa10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 VGLL2Q8N8G2 317 aa10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 FAM163AQ96GL9 167 aaPredicted RBP10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 SENP6Q9GZR1 1112 aaPredicted RBP10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 ASCC2Q9H1I8 757 aaPredicted RBP10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 FBXO3Q9UK99 471 aa10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 HCN4Q9Y3Q4 1203 aa10.56□□□□□ -0.72
RN7SL239P-201ENST00000490061 USP17L5A8MUK1 530 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 FGFR2P21802 821 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 RGS3P49796 1198 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 RABL6Q3YEC7 729 aaPredicted RBP10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 AKNAD1Q5T1N1 836 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 TREML2Q5T2D2 321 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 USP6NLQ92738 828 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 TMOD4Q9NZQ9 345 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 DENND2AQ9ULE3 1009 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 UTYO14607 1347 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 GAKO14976 1311 aa10.55□□□□□ -0.72
RN7SL239P-201ENST00000490061 PLXNB2O15031 1838 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 KBTBD13C9JR72 458 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 MRPS5P82675 430 aaKnown RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 MAP3K12Q12852 859 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 TRIM32Q13049 653 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 SPP2Q13103 211 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 MYO9BQ13459 2157 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 SHHQ15465 462 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 EPHA10Q5JZY3 1008 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 SPTY2D1Q68D10 685 aaPredicted RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 CCDC174Q6PII3 467 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 DNAH12Q6ZR08 3092 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 PLEKHH3Q7Z736 793 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 GAS2L1Q99501 681 aaPredicted RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 PUS3Q9BZE2 481 aaKnown RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 TSPYL2Q9H2G4 693 aaPredicted RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 DDX20Q9UHI6 824 aaKnown RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 HERC5Q9UII4 1024 aaKnown RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 PDS5AQ29RF7 1337 aaKnown RBP10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 LTBP2Q14767 1821 aa10.54□□□□□ -0.72
RN7SL239P-201ENST00000490061 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 ASNSP08243 561 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 HMGCS2P54868 508 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 RTP1P59025 263 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 MAP2K5Q13163 448 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 SNX17Q15036 470 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 AAK1Q2M2I8 961 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 MORN1Q5T089 497 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 GPR142Q7Z601 462 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 ASB2Q96Q27 587 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 WDR18Q9BV38 432 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 CWC22Q9HCG8 908 aaKnown RBP10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 TACC3Q9Y6A5 838 aa10.53□□□□□ -0.72
RN7SL239P-201ENST00000490061 HOXC6P09630 235 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 PRDX5P30044 214 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 CAP2P40123 477 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 HERVK_113P62684 666 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 ERVK-9P63128 1117 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 ERVK-24P63145 666 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 DIXDC1Q155Q3 683 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 TSR2Q969E8 191 aaKnown RBP10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 EDC3Q96F86 508 aaKnown RBP10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 RNPC3Q96LT9 517 aaKnown RBP10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 UHRF1Q96T88 793 aaPredicted RBP10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 MYH2Q9UKX2 1941 aa10.52□□□□□ -0.73
RN7SL239P-201ENST00000490061 FRMPD3Q5JV73 1810 aa10.51□□□□□ -0.73
RN7SL239P-201ENST00000490061 DDTLA6NHG4 134 aaPredicted RBP10.51□□□□□ -0.73
RN7SL239P-201ENST00000490061 SLC15A5A6NIM6 579 aa10.51□□□□□ -0.73
RN7SL239P-201ENST00000490061 IGSF3O75054 1194 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms