RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 FANCGO15287 622 aa8.92□□□□□ -0.98
CCDC39-206ENST00000489868 RPL6Q02878 288 aaKnown RBP8.92□□□□□ -0.98
CCDC39-206ENST00000489868 CCDC84Q86UT8 332 aaPredicted RBP8.92□□□□□ -0.98
CCDC39-206ENST00000489868 GOLM1Q8NBJ4 401 aa8.92□□□□□ -0.98
CCDC39-206ENST00000489868 GATAD2BQ8WXI9 593 aa8.92□□□□□ -0.98
CCDC39-206ENST00000489868 KCNQ5Q9NR82 932 aa8.92□□□□□ -0.98
CCDC39-206ENST00000489868 PCOLCE2Q9UKZ9 415 aa8.92□□□□□ -0.98
CCDC39-206ENST00000489868 PWP1Q13610 501 aa8.91□□□□□ -0.98
CCDC39-206ENST00000489868 NKG7Q16617 165 aa8.91□□□□□ -0.98
CCDC39-206ENST00000489868 ZNF394Q53GI3 561 aa8.91□□□□□ -0.98
CCDC39-206ENST00000489868 SLC51AQ86UW1 340 aa8.91□□□□□ -0.98
CCDC39-206ENST00000489868 METTL16Q86W50 562 aaKnown RBP8.91□□□□□ -0.98
CCDC39-206ENST00000489868 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.91□□□□□ -0.98
CCDC39-206ENST00000489868 WNT10AQ9GZT5 417 aa8.91□□□□□ -0.98
CCDC39-206ENST00000489868 PICK1Q9NRD5 415 aa8.91□□□□□ -0.98
CCDC39-206ENST00000489868 GRK4P32298 578 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 EIF4A3P38919 411 aaKnown RBP8.9□□□□□ -0.98
CCDC39-206ENST00000489868 SNAP47Q5SQN1 464 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 ZMYM1Q5SVZ6 1142 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 ZNF765Q7L2R6 523 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 METTL5Q9NRN9 209 aaKnown RBP8.9□□□□□ -0.98
CCDC39-206ENST00000489868 RNF112Q9ULX5 631 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 PCDHGB7Q9Y5F8 929 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 CORINQ9Y5Q5 1042 aa8.9□□□□□ -0.98
CCDC39-206ENST00000489868 RBAK-RBAKDNI3L0D1 243 aa8.89□□□□□ -0.99
CCDC39-206ENST00000489868 SCAMP3O14828 347 aaKnown RBP8.89□□□□□ -0.99
CCDC39-206ENST00000489868 GREM1O60565 184 aa8.89□□□□□ -0.99
CCDC39-206ENST00000489868 LEFTY1O75610 366 aa8.89□□□□□ -0.99
CCDC39-206ENST00000489868 MED26O95402 600 aa8.89□□□□□ -0.99
CCDC39-206ENST00000489868 CRKP46108 304 aa8.89□□□□□ -0.99
CCDC39-206ENST00000489868 SLBPQ14493 270 aaKnown RBP eCLIP8.89□□□□□ -0.99
CCDC39-206ENST00000489868 FAM196AQ6ZSG2 479 aa8.89□□□□□ -0.99
CCDC39-206ENST00000489868 SSU72Q9NP77 194 aaKnown RBP8.89□□□□□ -0.99
CCDC39-206ENST00000489868 POLR3KQ9Y2Y1 108 aaPredicted RBP8.89□□□□□ -0.99
CCDC39-206ENST00000489868 HOXA10P31260 410 aaPredicted RBP8.88□□□□□ -0.99
CCDC39-206ENST00000489868 HDLBPQ00341 1268 aaKnown RBP8.88□□□□□ -0.99
CCDC39-206ENST00000489868 ZNF296Q8WUU4 475 aaPredicted RBP8.88□□□□□ -0.99
CCDC39-206ENST00000489868 TLR3O15455 904 aaKnown RBP8.87□□□□□ -0.99
CCDC39-206ENST00000489868 FAM87AP0C7U9 286 aa8.87□□□□□ -0.99
CCDC39-206ENST00000489868 ETF1P62495 437 aaKnown RBP8.87□□□□□ -0.99
CCDC39-206ENST00000489868 RACK1P63244 317 aaKnown RBP8.87□□□□□ -0.99
CCDC39-206ENST00000489868 C9orf131Q5VYM1 1079 aa8.87□□□□□ -0.99
CCDC39-206ENST00000489868 OGFOD3Q6PK18 319 aa8.87□□□□□ -0.99
CCDC39-206ENST00000489868 RNF34Q969K3 372 aa8.87□□□□□ -0.99
CCDC39-206ENST00000489868 DUSP23Q9BVJ7 150 aa8.87□□□□□ -0.99
CCDC39-206ENST00000489868 U3KQE9 123 aa8.87□□□□□ -0.99
CCDC39-206ENST00000489868 ARMCX6Q7L4S7 300 aa8.86□□□□□ -0.99
CCDC39-206ENST00000489868 USP48Q86UV5 1035 aa8.86□□□□□ -0.99
CCDC39-206ENST00000489868 ZNF507Q8TCN5 953 aa8.86□□□□□ -0.99
CCDC39-206ENST00000489868 OSBPL1AQ9BXW6 950 aa8.86□□□□□ -0.99
CCDC39-206ENST00000489868 UBP1Q9NZI7 540 aa8.86□□□□□ -0.99
CCDC39-206ENST00000489868 TJP2Q9UDY2 1190 aa8.86□□□□□ -0.99
CCDC39-206ENST00000489868 SUPT16HQ9Y5B9 1047 aaKnown RBP8.86□□□□□ -0.99
CCDC39-206ENST00000489868 GRIN3BO60391 1043 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 RBM25P49756 843 aaKnown RBP8.85□□□□□ -0.99
CCDC39-206ENST00000489868 MPP2Q14168 576 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 CDC37L1Q7L3B6 337 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 REC114Q7Z4M0 266 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 TOP6BLQ8N6T0 577 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 ATG3Q9NT62 314 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 PIM2Q9P1W9 311 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 DDX41Q9UJV9 622 aaKnown RBP8.85□□□□□ -0.99
CCDC39-206ENST00000489868 TACC3Q9Y6A5 838 aa8.85□□□□□ -0.99
CCDC39-206ENST00000489868 BPNT1O95861 308 aa8.84□□□□□ -0.99
CCDC39-206ENST00000489868 PGRP06401 933 aa8.84□□□□□ -0.99
CCDC39-206ENST00000489868 SSTR4P31391 388 aa8.84□□□□□ -0.99
CCDC39-206ENST00000489868 CD97P48960 835 aa8.84□□□□□ -0.99
CCDC39-206ENST00000489868 ACSF2Q96CM8 615 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-206ENST00000489868 EAF1Q96JC9 268 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-206ENST00000489868 DPH2Q9BQC3 489 aaPredicted RBP8.84□□□□□ -0.99
CCDC39-206ENST00000489868 LRRC3Q9BY71 257 aa8.84□□□□□ -0.99
CCDC39-206ENST00000489868 PRR36Q9H6K5 1346 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 CAP2P40123 477 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 PRAMEF13Q5VWM6 474 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 FAM214BQ7L5A3 538 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 HID1Q8IV36 788 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 KCT2Q8NC54 265 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 METTL22Q9BUU2 404 aaPredicted RBP8.83□□□□□ -1
CCDC39-206ENST00000489868 PRDM10Q9NQV6 1147 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 LEMD3Q9Y2U8 911 aa8.83□□□□□ -1
CCDC39-206ENST00000489868 DNAJA2O60884 412 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 LRIG2O94898 1065 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 SLITRK5O94991 958 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 NT5DC4Q86YG4 428 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 RIN3Q8TB24 985 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 TMEM87BQ96K49 555 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 HEXIM2Q96MH2 286 aaKnown RBP8.82□□□□□ -1
CCDC39-206ENST00000489868 SPON2Q9BUD6 331 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 FOXQ1Q9C009 403 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 BRMS1Q9HCU9 246 aa8.82□□□□□ -1
CCDC39-206ENST00000489868 CNTNAP4Q9C0A0 1308 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 EOMESO95936 686 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 FOSL1P15407 271 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 RAD51AP2Q09MP3 1159 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 CPSF6Q16630 551 aaKnown RBP eCLIP8.81□□□□□ -1
CCDC39-206ENST00000489868 DUSP27Q5VZP5 1158 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 KIAA0825Q8IV33 1275 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 MRPL41Q8IXM3 137 aaKnown RBP8.81□□□□□ -1
CCDC39-206ENST00000489868 FAM181AQ8N9Y4 354 aa8.81□□□□□ -1
CCDC39-206ENST00000489868 GIMAP7Q8NHV1 300 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms